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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Sprains and Strains
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Accession:DOID:9000934 term browser browse the term
Definition:A collective term for muscle and ligament injuries without dislocation or fracture. A sprain is a joint injury in which some of the fibers of a supporting ligament are ruptured but the continuity of the ligament remains intact. A strain is an overstretching or overexertion of some part of the musculature.
Synonyms:exact_synonym: Sprain;   Strain;   sprains;   strains
 primary_id: MESH:D013180
For additional species annotation, visit the Alliance of Genome Resources.



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Sprains and Strains term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL3 cathepsin L family member 3 ISO mRNA:increased expression:ligament (rat) RGD PMID:15694131 RGD:2315597 NCBI chr 1:72,215,774...72,219,093 JBrowse link
carpal tunnel syndrome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TTR transthyretin ISO ClinVar Annotator: match by term: Carpal tunnel syndrome, familial
ClinVar Annotator: match by term: AMYOTROPHY, THENAR, OF CARPAL ORIGIN
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:192115 PMID:1351039 PMID:1353008 PMID:1358785 PMID:1490495 More... NCBI chr 7:57,940,354...57,947,084
Ensembl chr 7:57,914,381...57,947,058
JBrowse link
Carpal Tunnel Syndrome 1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TTR transthyretin ISO OMIM NCBI chr 7:57,940,354...57,947,084
Ensembl chr 7:57,914,381...57,947,058
JBrowse link
Carpal Tunnel Syndrome 2 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMP cartilage oligomeric matrix protein ISO OMIM NCBI chr20:44,306,813...44,314,575
Ensembl chr20:44,306,859...44,314,625
JBrowse link
Cumulative Trauma Disorders term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POSTN periostin ISO protein:increased expression:tendon,muscle,nerve: RGD PMID:19620321 RGD:10040958 NCBI chr25:3,167,319...3,208,970
Ensembl chr25:3,167,359...3,208,411
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 13842
    Wounds and Injuries 838
      Sprains and Strains 4
        Cumulative Trauma Disorders + 3
paths to the root