Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Stomach Neoplasms
go back to main search page
Accession:DOID:9000217 term browser browse the term
Definition:Tumors or cancer of the STOMACH.
Synonyms:exact_synonym: NEOPLASM OF STOMACH;   gastric neoplasm;   gastric neoplasms;   stomach neoplasm
 narrow_synonym: HDGC
 primary_id: MESH:D013274
 alt_id: OMIM:613659
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
 
Stomach Neoplasms term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABT1 activator of basal transcription 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 6:26,596,953...26,600,739
Ensembl chr 6:26,596,953...26,600,739
JBrowse link
G ACAD8 acyl-CoA dehydrogenase family member 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:134,253,538...134,265,858
Ensembl chr11:134,253,548...134,265,855
JBrowse link
G ACE angiotensin I converting enzyme EXP CTD Direct Evidence: marker/mechanism CTD PMID:18059164 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G ACTC1 actin alpha cardiac muscle 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr15:34,790,230...34,795,549
Ensembl chr15:34,790,230...34,795,549
JBrowse link
G ADRB1 adrenoceptor beta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17003101 NCBI chr10:114,043,866...114,046,904
Ensembl chr10:114,043,866...114,046,904
JBrowse link
G ADRB2 adrenoceptor beta 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17003101 NCBI chr 5:148,826,611...148,828,623
Ensembl chr 5:148,826,611...148,828,623
JBrowse link
G AFP alpha fetoprotein EXP CTD Direct Evidence: marker/mechanism CTD PMID:23382965 NCBI chr 4:73,436,221...73,456,174
Ensembl chr 4:73,431,138...73,456,174
JBrowse link
G AGTR2 angiotensin II receptor type 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18059164 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G AHR aryl hydrocarbon receptor EXP CTD Direct Evidence: marker/mechanism CTD PMID:12107286 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G AKR1C3 aldo-keto reductase family 1 member C3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr10:5,048,781...5,107,686
Ensembl chr10:5,035,354...5,107,686
JBrowse link
G ALB albumin EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr15:100,879,831...100,916,626
Ensembl chr15:100,877,714...100,916,626
JBrowse link
G ALDH7A1 aldehyde dehydrogenase 7 family member A1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 5:126,541,841...126,595,219
Ensembl chr 5:126,531,200...126,595,362
JBrowse link
G ALDOB aldolase, fructose-bisphosphate B EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr 9:101,420,560...101,435,774
Ensembl chr 9:101,420,560...101,449,664
JBrowse link
G ALOX5 arachidonate 5-lipoxygenase EXP CTD Direct Evidence: marker/mechanism CTD PMID:20061081 NCBI chr10:45,374,209...45,446,121
Ensembl chr10:45,374,176...45,446,119
JBrowse link
G ANXA5 annexin A5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 4:121,667,946...121,696,994
Ensembl chr 4:121,667,946...121,696,995
JBrowse link
G APC APC regulator of WNT signaling pathway IAGP ClinVar Annotator: match by term: Neoplasm of stomach OMIM
ClinVar
PMID:25741868 PMID:25992589 PMID:26467025 PMID:26493165 PMID:26900293 More... NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,498...112,846,239
JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772
JBrowse link
G APOA1 apolipoprotein A1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 PMID:19424620 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G AREG amphiregulin EXP CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:15723263 PMID:15940630 PMID:16367923 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G ARFGAP2 ADP ribosylation factor GTPase activating protein 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:47,164,301...47,176,880
Ensembl chr11:47,164,299...47,177,125
JBrowse link
G ARID1A AT-rich interaction domain 1A EXP CTD Direct Evidence: marker/mechanism CTD PMID:22037554 PMID:22484628 PMID:24816253 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G ARL6IP5 ADP ribosylation factor like GTPase 6 interacting protein 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22452940 NCBI chr 3:69,084,937...69,106,092
Ensembl chr 3:69,084,937...69,106,092
JBrowse link
G ATM ATM serine/threonine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:26098866 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,223,044...108,369,102
JBrowse link
G ATP6V0D2 ATPase H+ transporting V0 subunit d2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25279216 NCBI chr 8:86,098,910...86,154,225
Ensembl chr 8:85,987,323...86,154,225
JBrowse link
G AURKB aurora kinase B EXP CTD Direct Evidence: marker/mechanism CTD PMID:15993841 NCBI chr17:8,204,731...8,210,767
Ensembl chr17:8,204,733...8,210,600
JBrowse link
G BAP1 BRCA1 associated protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25231345 PMID:26719535 NCBI chr 3:52,401,004...52,410,030
Ensembl chr 3:52,401,008...52,410,008
JBrowse link
G BCL2L1 BCL2 like 1 EXP CTD Direct Evidence: therapeutic CTD PMID:26401016 NCBI chr20:31,664,452...31,723,963
Ensembl chr20:31,664,452...31,723,989
JBrowse link
G BDNF brain derived neurotrophic factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr11:27,654,893...27,722,030
Ensembl chr11:27,654,893...27,722,058
JBrowse link
G BID BH3 interacting domain death agonist EXP CTD Direct Evidence: marker/mechanism CTD PMID:15095271 NCBI chr22:17,734,138...17,774,665
Ensembl chr22:17,734,138...17,774,770
JBrowse link
G BIRC2 baculoviral IAP repeat containing 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:14647439 NCBI chr11:102,347,214...102,378,670
Ensembl chr11:102,347,211...102,378,670
JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15993841 NCBI chr17:78,214,253...78,225,635
Ensembl chr17:78,214,186...78,225,636
JBrowse link
G BLVRB biliverdin reductase B EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr19:40,447,768...40,465,745
Ensembl chr19:40,447,765...40,465,764
JBrowse link
G BMP2 bone morphogenetic protein 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16314833 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246
JBrowse link
G BMP7 bone morphogenetic protein 7 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G BNIP3 BCL2 interacting protein 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr10:131,967,684...131,981,923
Ensembl chr10:131,966,455...131,982,013
JBrowse link
G BOP1 BOP1 ribosomal biogenesis factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 8:144,262,045...144,291,438
Ensembl chr 8:144,262,045...144,291,438
JBrowse link
G CA1 carbonic anhydrase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 PMID:19424620 NCBI chr 8:85,327,608...85,378,113
Ensembl chr 8:85,327,608...85,379,014
JBrowse link
G CA2 carbonic anhydrase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr 8:85,464,007...85,481,493
Ensembl chr 8:85,463,968...85,481,493
JBrowse link
G CASP10 caspase 10 IAGP ClinVar Annotator: match by term: Neoplasm of stomach OMIM
ClinVar
PMID:11973654 PMID:12010812 PMID:25741868 NCBI chr 2:201,182,885...201,229,406
Ensembl chr 2:201,182,898...201,229,406
JBrowse link
G CASP8 caspase 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17450141 NCBI chr 2:201,233,443...201,287,711
Ensembl chr 2:201,233,443...201,287,711
JBrowse link
G CAV1 caveolin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 7:116,525,009...116,561,185
Ensembl chr 7:116,524,994...116,561,179
JBrowse link
G CCAT1 colon cancer associated transcript 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26752646 PMID:31945315 NCBI chr 8:127,207,382...127,219,268 JBrowse link
G CCND1 cyclin D1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21628965 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474
JBrowse link
G CCT7 chaperonin containing TCP1 subunit 7 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 2:73,233,425...73,253,008
Ensembl chr 2:73,233,420...73,253,021
JBrowse link
G CD44 CD44 molecule (Indian blood group) EXP CTD Direct Evidence: marker/mechanism CTD PMID:21471434 NCBI chr11:35,139,168...35,232,402
Ensembl chr11:35,138,882...35,232,402
JBrowse link
G CDH1 cadherin 1 EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Neoplasm of stomach
CTD
ClinVar
PMID:9537325 PMID:10072428 PMID:12216071 PMID:12588804 PMID:12944922 More... NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537
JBrowse link
G CDH2 cadherin 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr18:27,932,878...28,177,130
Ensembl chr18:27,932,879...28,177,946
JBrowse link
G CDK4 cyclin dependent kinase 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21628965 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A ISO
EXP
protein:increased expression:stomach
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:14647439 PMID:23890812 RGD:13792775 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337
JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B EXP CTD Direct Evidence: marker/mechanism CTD PMID:15138205 NCBI chr12:12,717,368...12,722,369
Ensembl chr12:12,685,498...12,722,369
JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301
JBrowse link
G CDKN2D cyclin dependent kinase inhibitor 2D EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:10,566,460...10,568,979
Ensembl chr19:10,566,460...10,569,059
JBrowse link
G CHEK2 checkpoint kinase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr22:28,687,743...28,741,866
Ensembl chr22:28,687,743...28,742,422
JBrowse link
G CHFR checkpoint with forkhead and ring finger domains EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr12:132,832,356...132,887,618
Ensembl chr12:132,822,187...132,956,304
JBrowse link
G CKB creatine kinase B EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr14:103,519,667...103,522,833
Ensembl chr14:103,519,667...103,522,833
JBrowse link
G CLCN3 chloride voltage-gated channel 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 4:169,620,578...169,723,673
Ensembl chr 4:169,612,633...169,723,673
JBrowse link
G CLDN3 claudin 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 7:73,768,997...73,770,270
Ensembl chr 7:73,768,997...73,770,270
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,474,111...28,495,575
JBrowse link
G CNPY2 canopy FGF signaling regulator 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr12:56,309,844...56,316,346
Ensembl chr12:56,309,842...56,316,119
JBrowse link
G COPS7A COP9 signalosome subunit 7A EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr12:6,724,046...6,731,868
Ensembl chr12:6,724,014...6,731,875
JBrowse link
G CPSF1 cleavage and polyadenylation specific factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 8:144,393,231...144,409,400
Ensembl chr 8:144,393,229...144,409,335
JBrowse link
G CST1 cystatin SN EXP CTD Direct Evidence: marker/mechanism CTD PMID:19463800 NCBI chr20:23,747,562...23,750,935
Ensembl chr20:23,747,562...23,751,268
JBrowse link
G CST7 cystatin F EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr20:24,949,269...24,959,928
Ensembl chr20:24,949,269...24,959,928
JBrowse link
G CTNNA2 catenin alpha 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24816253 NCBI chr 2:79,505,054...80,648,788
Ensembl chr 2:79,185,231...80,648,861
JBrowse link
G CTNNB1 catenin beta 1 IAGP ClinVar Annotator: match by term: Neoplasm of stomach ClinVar PMID:9065403 PMID:10027390 PMID:11351304 PMID:11930117 PMID:11950921 More... NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CTSC cathepsin C EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:88,293,592...88,337,736
Ensembl chr11:88,265,069...88,359,684
JBrowse link
G CTSL cathepsin L EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 EXP CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:15492468 PMID:15723263 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,541...73,743,716
JBrowse link
G CYP2A6 cytochrome P450 family 2 subfamily A member 6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:12115524 PMID:21364592 NCBI chr19:40,843,541...40,850,447
Ensembl chr19:40,843,541...40,850,447
JBrowse link
G DCBLD2 discoidin, CUB and LCCL domain containing 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18314483 NCBI chr 3:98,795,941...98,901,695
Ensembl chr 3:98,795,941...98,901,695
JBrowse link
G DDB1 damage specific DNA binding protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596
JBrowse link
G DES desmin EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr 2:219,418,377...219,426,734
Ensembl chr 2:219,418,377...219,426,735
JBrowse link
G DLC1 DLC1 Rho GTPase activating protein EXP CTD Direct Evidence: therapeutic CTD PMID:26401016 NCBI chr 8:13,083,361...13,604,620
Ensembl chr 8:13,083,361...13,604,610
JBrowse link
G DNMT1 DNA methyltransferase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17571247 PMID:21458988 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286
JBrowse link
G DNMT3B DNA methyltransferase 3 beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:21458988 NCBI chr20:32,762,385...32,809,356
Ensembl chr20:32,762,385...32,809,356
JBrowse link
G DPAGT1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:119,096,505...119,101,884
Ensembl chr11:119,096,025...119,108,331
JBrowse link
G DPYD dihydropyrimidine dehydrogenase EXP CTD Direct Evidence: marker/mechanism CTD PMID:15837757 PMID:17089033 PMID:18652704 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000
JBrowse link
G EBI3 Epstein-Barr virus induced 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:4,229,196...4,237,539
Ensembl chr19:4,229,523...4,237,528
JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr10:133,362,480...133,373,396
Ensembl chr10:133,362,485...133,373,354
JBrowse link
G ECM1 extracellular matrix protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:31472228 NCBI chr 1:150,508,109...150,513,789
Ensembl chr 1:150,508,062...150,513,789
JBrowse link
G EEF1A1 eukaryotic translation elongation factor 1 alpha 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr 6:73,515,750...73,521,032
Ensembl chr 6:73,489,308...73,525,587
JBrowse link
G EEF1A2 eukaryotic translation elongation factor 1 alpha 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr20:63,488,014...63,499,083
Ensembl chr20:63,488,013...63,499,239
JBrowse link
G EGFR epidermal growth factor receptor EXP CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:15723263 PMID:21173787 PMID:22042947 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G ENO1 enolase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr 1:8,861,000...8,878,686
Ensembl chr 1:8,861,000...8,879,190
JBrowse link
G EPHX3 epoxide hydrolase 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:15,226,919...15,233,453
Ensembl chr19:15,226,919...15,233,435
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 IAGP
EXP
CTD Direct Evidence: marker/mechanism OMIM
CTD
PMID:15640503 PMID:21532492 PMID:22042947 NCBI chr17:39,688,094...39,728,660
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 IAGP ClinVar Annotator: match by term: Neoplasm of stomach ClinVar PMID:23680147 NCBI chr12:56,080,108...56,103,505
Ensembl chr12:56,076,799...56,103,505
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit EXP CTD Direct Evidence: marker/mechanism CTD PMID:21133646 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit EXP CTD Direct Evidence: marker/mechanism CTD PMID:17009404 NCBI chr19:45,349,837...45,370,647
Ensembl chr19:45,349,837...45,370,918
JBrowse link
G EXOSC5 exosome component 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:41,386,374...41,397,359
Ensembl chr19:41,386,374...41,397,359
JBrowse link
G F2R coagulation factor II thrombin receptor EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 5:76,716,126...76,735,770
Ensembl chr 5:76,716,126...76,735,770
JBrowse link
G FADS1 fatty acid desaturase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr11:61,799,627...61,817,003
Ensembl chr11:61,799,627...61,829,318
JBrowse link
G FAM168A family with sequence similarity 168 member A EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:73,400,487...73,598,112
Ensembl chr11:73,400,487...73,598,189
JBrowse link
G FAT4 FAT atypical cadherin 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22484628 NCBI chr 4:125,314,918...125,492,932
Ensembl chr 4:125,314,918...125,492,932
JBrowse link
G FBP1 fructose-bisphosphatase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22039417 NCBI chr 9:94,603,133...94,640,263
Ensembl chr 9:94,603,133...94,640,249
JBrowse link
G FCGBP Fc gamma binding protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:39,863,323...39,934,626
Ensembl chr19:39,863,323...39,934,626
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 IAGP
EXP
DNA:missense mutation, snp:cds, intron:p.S267P, IVS-2A>G (human)
ClinVar Annotator: match by term: Neoplasm of stomach
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
RGD
PMID:7558045 PMID:7655462 PMID:7719344 PMID:7773284 PMID:7874170 More... RGD:12801417 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FGG fibrinogen gamma chain EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr 4:154,604,136...154,612,656
Ensembl chr 4:154,604,134...154,612,967
JBrowse link
G FHIT fragile histidine triad diadenosine triphosphatase EXP CTD Direct Evidence: marker/mechanism CTD PMID:12958204 NCBI chr 3:59,747,277...61,251,452
Ensembl chr 3:59,747,277...61,251,459
JBrowse link
G FILIP1 filamin A interacting protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 6:75,291,858...75,493,800
Ensembl chr 6:75,291,859...75,493,800
JBrowse link
G FKBP2 FKBP prolyl isomerase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:64,241,095...64,244,135
Ensembl chr11:64,241,003...64,244,132
JBrowse link
G FSD1 fibronectin type III and SPRY domain containing 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:4,304,598...4,323,836
Ensembl chr19:4,304,598...4,323,843
JBrowse link
G FST follistatin EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 5:53,480,338...53,487,134
Ensembl chr 5:53,480,626...53,487,134
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 6:111,660,332...111,873,452
Ensembl chr 6:111,660,332...111,873,452
JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:15837757 NCBI chr 1:67,685,201...67,688,334
Ensembl chr 1:67,685,201...67,688,334
JBrowse link
G GAST gastrin EXP CTD Direct Evidence: marker/mechanism CTD PMID:15492468 NCBI chr17:41,712,331...41,715,969
Ensembl chr17:41,712,331...41,715,969
JBrowse link
G GKN1 gastrokine 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr 2:68,974,636...68,980,976
Ensembl chr 2:68,974,573...68,980,980
JBrowse link
G GLI3 GLI family zinc finger 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24816253 NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G GMPR2 guanosine monophosphate reductase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr14:24,232,622...24,239,242
Ensembl chr14:24,232,422...24,239,242
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr15:32,718,004...32,745,106
Ensembl chr15:32,718,004...32,745,106
JBrowse link
G GSTP1 glutathione S-transferase pi 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21133646 PMID:21364753 NCBI chr11:67,583,812...67,586,653
Ensembl chr11:67,583,742...67,586,656
JBrowse link
G HBEGF heparin binding EGF like growth factor EXP CTD Direct Evidence: therapeutic CTD PMID:15723263 NCBI chr 5:140,332,843...140,346,603
Ensembl chr 5:140,332,843...140,346,603
JBrowse link
G HIKESHI heat shock protein nuclear import factor hikeshi EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:86,302,229...86,345,943
Ensembl chr11:86,302,211...86,345,943
JBrowse link
G HMOX1 heme oxygenase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:14647439 PMID:22490514 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,214
JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:38,836,370...38,852,347
Ensembl chr19:38,836,370...38,852,347
JBrowse link
G HOTAIR HOX transcript antisense RNA EXP CTD Direct Evidence: marker/mechanism CTD PMID:26384301 NCBI chr12:53,962,308...53,974,956
Ensembl chr12:53,962,308...53,974,956
JBrowse link
G HOXA2 homeobox A2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17786296 NCBI chr 7:27,100,354...27,102,683
Ensembl chr 7:27,100,354...27,102,686
JBrowse link
G HRAS HRas proto-oncogene, GTPase EXP CTD Direct Evidence: marker/mechanism CTD PMID:11397402 PMID:26558449 NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
JBrowse link
G HRH4 histamine receptor H4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22363581 NCBI chr18:24,460,637...24,479,974
Ensembl chr18:24,460,637...24,479,961
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr11:123,057,489...123,062,366
Ensembl chr11:123,057,489...123,063,230
JBrowse link
G HSPB1 heat shock protein family B (small) member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr 7:76,302,673...76,304,292
Ensembl chr 7:76,302,673...76,304,295
JBrowse link
G HSPD1 heat shock protein family D (Hsp60) member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 PMID:19424620 NCBI chr 2:197,486,584...197,500,274
Ensembl chr 2:197,486,584...197,516,737
JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A EXP CTD Direct Evidence: therapeutic CTD PMID:21447133 NCBI chr 5:63,957,874...63,962,445
Ensembl chr 5:63,957,874...63,962,507
JBrowse link
G ICAM2 intercellular adhesion molecule 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr17:64,002,595...64,020,633
Ensembl chr17:64,002,594...64,020,634
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 6:19,837,370...19,842,197
Ensembl chr 6:19,837,370...19,842,197
JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr20:2,658,394...2,664,216
Ensembl chr20:2,658,395...2,664,219
JBrowse link
G IGFBP3 insulin like growth factor binding protein 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 7:45,912,245...45,921,272
Ensembl chr 7:45,912,245...45,921,874
JBrowse link
G IGFBP7 insulin like growth factor binding protein 7 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 4:57,030,773...57,110,385
Ensembl chr 4:57,030,773...57,110,385
JBrowse link
G IL1B interleukin 1 beta EXP
IAGP
CTD Direct Evidence: marker/mechanism CTD
OMIM
PMID:15492468 PMID:19584167 PMID:22414649 NCBI chr 2:112,829,751...112,836,843
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1RN interleukin 1 receptor antagonist IAGP OMIM NCBI chr 2:113,099,365...113,134,016
Ensembl chr 2:113,107,214...113,134,016
JBrowse link
G IL32 interleukin 32 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25279216 NCBI chr16:3,065,403...3,069,530
Ensembl chr16:3,065,297...3,082,192
JBrowse link
G IL6 interleukin 6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23593346 NCBI chr 7:22,725,889...22,732,002
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G IL6R interleukin 6 receptor EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 1:154,405,343...154,469,450
Ensembl chr 1:154,405,193...154,469,450
JBrowse link
G ING1 inhibitor of growth family member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr13:110,712,623...110,723,339
Ensembl chr13:110,712,736...110,723,339
JBrowse link
G IRF1 interferon regulatory factor 1 IAGP OMIM NCBI chr 5:132,481,609...132,490,789
Ensembl chr 5:132,440,440...132,508,719
JBrowse link
G IRS2 insulin receptor substrate 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr13:109,752,695...109,786,583
Ensembl chr13:109,752,695...109,786,583
JBrowse link
G ITGA5 integrin subunit alpha 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17786296 NCBI chr12:54,395,261...54,419,266
Ensembl chr12:54,395,261...54,419,266
JBrowse link
G ITGA8 integrin subunit alpha 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17786296 NCBI chr10:15,513,954...15,720,329
Ensembl chr10:15,513,954...15,719,922
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit EXP CTD Direct Evidence: marker/mechanism CTD PMID:17355264 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048
JBrowse link
G KISS1 KiSS-1 metastasis suppressor EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 1:204,190,341...204,196,491
Ensembl chr 1:204,190,341...204,196,491
JBrowse link
G KISS1R KISS1 receptor EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:916,693...921,005
Ensembl chr19:917,287...921,005
JBrowse link
G KLF6 Kruppel like factor 6 IAGP OMIM NCBI chr10:3,775,996...3,785,209
Ensembl chr10:3,775,996...3,785,281
JBrowse link
G KLK10 kallikrein related peptidase 10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17182177 NCBI chr19:51,012,739...51,020,097
Ensembl chr19:51,012,739...51,020,175
JBrowse link
G KMT2A lysine methyltransferase 2A EXP CTD Direct Evidence: marker/mechanism CTD PMID:22484628 NCBI chr11:118,436,492...118,526,832
Ensembl chr11:118,436,490...118,526,832
JBrowse link
G KMT2C lysine methyltransferase 2C EXP CTD Direct Evidence: marker/mechanism CTD PMID:22484628 NCBI chr 7:152,134,925...152,436,642
Ensembl chr 7:152,134,922...152,436,644
JBrowse link
G KRAS KRAS proto-oncogene, GTPase EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Gastric neoplasm
CTD
OMIM
ClinVar
PMID:2278970 PMID:3122217 PMID:7773929 PMID:8439212 PMID:10874023 More... NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G KRT20 keratin 20 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr17:40,875,889...40,885,242
Ensembl chr17:40,875,889...40,885,242
JBrowse link
G KRT8 keratin 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr12:52,897,191...52,949,860
Ensembl chr12:52,897,187...52,949,954
JBrowse link
G LGALS3 galectin 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21750908 NCBI chr14:55,129,252...55,145,430
Ensembl chr14:55,124,110...55,145,423
JBrowse link
G LRRC3B leucine rich repeat containing 3B EXP CTD Direct Evidence: marker/mechanism CTD PMID:18757430 NCBI chr 3:26,622,772...26,717,277
Ensembl chr 3:26,622,806...26,717,537
JBrowse link
G M6PR mannose-6-phosphate receptor, cation dependent EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr12:8,940,361...8,949,645
Ensembl chr12:8,940,361...8,949,761
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17003101 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17003101 NCBI chr16:30,114,105...30,123,309
Ensembl chr16:30,114,105...30,123,506
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18593901 NCBI chr10:48,306,673...48,439,360
Ensembl chr10:48,306,639...48,439,360
JBrowse link
G MARK1 microtubule affinity regulating kinase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 1:220,528,136...220,664,461
Ensembl chr 1:220,528,136...220,664,461
JBrowse link
G MBD3L2 methyl-CpG binding domain protein 3 like 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:7,049,321...7,051,735
Ensembl chr19:7,049,321...7,051,735
JBrowse link
G MDM2 MDM2 proto-oncogene EXP CTD Direct Evidence: marker/mechanism CTD PMID:31945315 NCBI chr12:68,808,149...68,850,686
Ensembl chr12:68,808,177...68,845,544
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:22042947 PMID:22729845 NCBI chr 7:116,672,196...116,798,386
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MIA MIA SH3 domain containing EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:40,775,160...40,777,490
Ensembl chr19:40,771,648...40,777,490
JBrowse link
G MIR22HG MIR22 host gene EXP CTD Direct Evidence: marker/mechanism CTD PMID:30670679 NCBI chr17:1,711,504...1,716,272
Ensembl chr17:1,711,493...1,717,174
JBrowse link
G MLF1 myeloid leukemia factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 3:158,571,194...158,606,456
Ensembl chr 3:158,571,163...158,607,252
JBrowse link
G MMP10 matrix metallopeptidase 10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22285823 NCBI chr11:102,770,502...102,780,628
Ensembl chr11:102,770,502...102,780,628
JBrowse link
G MMP7 matrix metallopeptidase 7 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25847246 NCBI chr11:102,520,508...102,530,747
Ensembl chr11:102,520,508...102,530,750
JBrowse link
G MRPL13 mitochondrial ribosomal protein L13 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 8:120,395,437...120,445,150
Ensembl chr 8:120,380,761...120,445,402
JBrowse link
G MRPS11 mitochondrial ribosomal protein S11 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr15:88,467,708...88,480,776
Ensembl chr15:88,467,453...88,480,776
JBrowse link
G MRPS18B mitochondrial ribosomal protein S18B EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 6:30,617,320...30,626,393
Ensembl chr 6:30,617,840...30,626,395
JBrowse link
G MSLN mesothelin EXP CTD Direct Evidence: marker/mechanism CTD PMID:22644300 NCBI chr16:760,734...768,865
Ensembl chr16:760,734...768,865
JBrowse link
G MSX1 msh homeobox 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 4:4,859,665...4,863,936
Ensembl chr 4:4,859,665...4,863,936
JBrowse link
G MT2A metallothionein 2A EXP CTD Direct Evidence: marker/mechanism CTD PMID:14503839 NCBI chr16:56,608,584...56,609,497
Ensembl chr16:56,608,584...56,609,497
JBrowse link
G MTHFR methylenetetrahydrofolate reductase EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Gastric neoplasm
CTD
ClinVar
PMID:1522835 PMID:7564788 PMID:7647779 PMID:7741859 PMID:8542260 More... NCBI chr 1:11,785,723...11,806,103
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 8:124,550,784...124,728,473
Ensembl chr 8:124,550,784...124,728,473
JBrowse link
G MUC1 mucin 1, cell surface associated EXP CTD Direct Evidence: marker/mechanism CTD PMID:26098866 NCBI chr 1:155,185,824...155,192,915
Ensembl chr 1:155,185,824...155,192,916
JBrowse link
G MUC6 mucin 6, oligomeric mucus/gel-forming EXP CTD Direct Evidence: marker/mechanism CTD PMID:24816253 NCBI chr11:1,012,823...1,036,718
Ensembl chr11:1,012,823...1,036,718
JBrowse link
G MUTYH mutY DNA glycosylase IAGP ClinVar Annotator: match by term: Gastric neoplasm OMIM
ClinVar
PMID:11818965 PMID:12606733 PMID:15931596 PMID:15987719 PMID:16492921 More... NCBI chr 1:45,329,242...45,340,447
Ensembl chr 1:45,329,163...45,340,893
JBrowse link
G MX1 MX dynamin like GTPase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr21:41,420,329...41,459,214
Ensembl chr21:41,420,020...41,470,071
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:17171786 PMID:21173787 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ameliorates ISO RGD PMID:26888865 RGD:150519909 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,478...38,143,022
JBrowse link
G NAXD NAD(P)HX dehydratase EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr13:110,615,460...110,639,996
Ensembl chr13:110,615,545...110,639,996
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 2:14,998,067...15,561,344
Ensembl chr 2:15,166,914...15,561,334
JBrowse link
G NDUFA2 NADH:ubiquinone oxidoreductase subunit A2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 5:140,645,285...140,647,630
Ensembl chr 5:140,638,740...140,647,771
JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 2:206,114,817...206,159,444
Ensembl chr 2:206,114,817...206,159,509
JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:67,606,936...67,612,554
Ensembl chr11:67,605,653...67,612,554
JBrowse link
G NOP56 NOP56 ribonucleoprotein EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr20:2,652,632...2,658,393
Ensembl chr20:2,652,593...2,658,393
JBrowse link
G NOS3 nitric oxide synthase 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588
JBrowse link
G NOTCH2 notch receptor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30670679 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G NPM1 nucleophosmin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:10619186 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810
JBrowse link
G NRAS NRAS proto-oncogene, GTPase IAGP ClinVar Annotator: match by term: Neoplasm of stomach ClinVar PMID:25157968 NCBI chr 1:114,704,469...114,716,771
Ensembl chr 1:114,704,469...114,716,771
JBrowse link
G NT5E 5'-nucleotidase ecto EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 6:85,450,083...85,495,784
Ensembl chr 6:85,449,584...85,495,791
JBrowse link
G PA2G4 proliferation-associated 2G4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr12:56,104,559...56,113,910
Ensembl chr12:56,104,537...56,113,910
JBrowse link
G PAX6 paired box 6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr  X:19,343,906...19,361,718
Ensembl chr  X:19,343,893...19,361,718
JBrowse link
G PGAM1 phosphoglycerate mutase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr10:97,426,191...97,433,444
Ensembl chr10:97,426,191...97,433,444
JBrowse link
G PHB1 prohibitin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 PMID:21364753 NCBI chr17:49,404,052...49,414,882
Ensembl chr17:49,404,052...49,414,901
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha IAGP
EXP
ClinVar Annotator: match by term: Gastric neoplasm
ClinVar Annotator: match by term: Neoplasm of stomach
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PLAGL1 PLAG1 like zinc finger 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 6:143,940,300...144,064,599
Ensembl chr 6:143,940,300...144,064,599
JBrowse link
G PLAU plasminogen activator, urokinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr10:73,909,182...73,917,497
Ensembl chr10:73,909,177...73,917,496
JBrowse link
G PLCE1 phospholipase C epsilon 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:20729852 NCBI chr10:93,993,931...94,332,823
Ensembl chr10:93,993,931...94,332,823
JBrowse link
G PLIN2 perilipin 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 9:19,108,391...19,127,518
Ensembl chr 9:19,108,375...19,149,290
JBrowse link
G PLPP1 phospholipid phosphatase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 5:55,424,850...55,535,075
Ensembl chr 5:55,424,854...55,534,969
JBrowse link
G POLR1H RNA polymerase I subunit H EXP CTD Direct Evidence: marker/mechanism CTD PMID:16609701 NCBI chr 6:30,061,265...30,064,907
Ensembl chr 6:30,058,899...30,064,909
JBrowse link
G POLR3K RNA polymerase III subunit K EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr16:46,407...53,608
Ensembl chr16:46,407...53,608
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma EXP CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:15492468 PMID:19140230 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G PPIA peptidylprolyl isomerase A EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
G PPIC peptidylprolyl isomerase C EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 5:123,023,250...123,036,725
Ensembl chr 5:123,023,250...123,036,725
JBrowse link
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:52,190,052...52,229,518
Ensembl chr19:52,190,048...52,229,518
JBrowse link
G PRDX5 peroxiredoxin 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr11:64,318,121...64,321,811
Ensembl chr11:64,318,121...64,321,811
JBrowse link
G PREP prolyl endopeptidase EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 6:105,273,218...105,403,102
Ensembl chr 6:105,273,218...105,454,062
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26098866 NCBI chr 5:40,759,389...40,798,374
Ensembl chr 5:40,759,379...40,798,374
JBrowse link
G PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr12:119,667,864...119,681,624
Ensembl chr12:119,667,864...119,681,624
JBrowse link
G PRKCB protein kinase C beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:17003101 NCBI chr16:23,835,983...24,220,611
Ensembl chr16:23,835,983...24,220,611
JBrowse link
G PRNP prion protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:17387271 NCBI chr20:4,686,456...4,701,588
Ensembl chr20:4,686,350...4,701,590
JBrowse link
G PRPF19 pre-mRNA processing factor 19 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585
JBrowse link
G PRR5-ARHGAP8 PRR5-ARHGAP8 readthrough EXP CTD Direct Evidence: marker/mechanism CTD PMID:25279216 NCBI chr22:44,702,204...44,862,784
Ensembl chr22:44,702,233...44,862,706
JBrowse link
G PSCA prostate stem cell antigen EXP CTD Direct Evidence: marker/mechanism CTD PMID:18488030 PMID:26098866 NCBI chr 8:142,670,297...142,682,725
Ensembl chr 8:142,670,308...142,682,725
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:10404093 PMID:17003101 PMID:17224647 PMID:22385256 NCBI chr 1:186,671,791...186,680,423
Ensembl chr 1:186,671,791...186,680,922
JBrowse link
G PTOV1 PTOV1 extended AT-hook containing adaptor protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:49,848,554...49,860,742
Ensembl chr19:49,850,735...49,860,744
JBrowse link
G PTPA protein phosphatase 2 phosphatase activator EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 9:129,110,949...129,148,946
Ensembl chr 9:129,110,950...129,148,946
JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 1:43,522,238...43,623,666
Ensembl chr 1:43,525,187...43,623,666
JBrowse link
G PTPRG protein tyrosine phosphatase receptor type G EXP CTD Direct Evidence: marker/mechanism CTD PMID:17963294 NCBI chr 3:61,561,571...62,297,609
Ensembl chr 3:61,561,569...62,297,609
JBrowse link
G PUS1 pseudouridine synthase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr12:131,929,268...131,945,896
Ensembl chr12:131,929,200...131,945,896
JBrowse link
G PYCARD PYD and CARD domain containing EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr16:31,201,486...31,202,760
Ensembl chr16:31,201,486...31,203,450
JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:12,945,846...12,953,642
Ensembl chr19:12,945,855...12,953,642
JBrowse link
G RANBP10 RAN binding protein 10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr16:67,723,068...67,806,560
Ensembl chr16:67,723,070...67,806,652
JBrowse link
G RARB retinoic acid receptor beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:16134180 NCBI chr 3:24,829,321...25,597,932
Ensembl chr 3:25,174,332...25,597,932
JBrowse link
G RARRES1 retinoic acid receptor responder 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16134180 NCBI chr 3:158,696,892...158,732,944
Ensembl chr 3:158,696,892...158,732,489
JBrowse link
G RBP1 retinol binding protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16134180 PMID:16367923 NCBI chr 3:139,517,438...139,539,742
Ensembl chr 3:139,517,434...139,539,829
JBrowse link
G RBP4 retinol binding protein 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr10:93,591,694...93,601,744
Ensembl chr10:93,591,687...93,601,744
JBrowse link
G REG1A regenerating family member 1 alpha ISO CTD Direct Evidence: therapeutic CTD PMID:15940630 NCBI chr 2:79,120,488...79,123,409
Ensembl chr 2:79,120,362...79,123,409
JBrowse link
G REG4 regenerating family member 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17237819 NCBI chr 1:119,794,017...119,811,460
Ensembl chr 1:119,794,017...119,811,580
JBrowse link
G RGS2 regulator of G protein signaling 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 1:192,809,039...192,812,275
Ensembl chr 1:192,809,039...192,812,275
JBrowse link
G RHOA ras homolog family member A EXP CTD Direct Evidence: marker/mechanism CTD PMID:15448013 PMID:24816253 PMID:24816255 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998
JBrowse link
G RNF43 ring finger protein 43 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24816253 NCBI chr17:58,352,500...58,418,894
Ensembl chr17:58,353,676...58,417,595
JBrowse link
G RORA RAR related orphan receptor A EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr15:60,488,284...61,229,302
Ensembl chr15:60,488,284...61,229,302
JBrowse link
G RPL13 ribosomal protein L13 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr16:89,560,657...89,566,829
Ensembl chr16:89,560,677...89,564,542
JBrowse link
G RPL15 ribosomal protein L15 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 3:23,916,545...23,924,631
Ensembl chr 3:23,916,591...23,924,374
JBrowse link
G RPL18 ribosomal protein L18 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:48,615,331...48,619,178
Ensembl chr19:48,615,328...48,619,184
JBrowse link
G RPS15 ribosomal protein S15 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:1,438,396...1,440,495
Ensembl chr19:1,438,358...1,440,495
JBrowse link
G RPS19 ribosomal protein S19 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:41,860,255...41,872,925
Ensembl chr19:41,860,255...41,872,925
JBrowse link
G RPS21 ribosomal protein S21 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr20:62,386,275...62,388,520
Ensembl chr20:62,387,103...62,388,520
JBrowse link
G RPS26 ribosomal protein S26 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr12:56,041,918...56,044,697
Ensembl chr12:56,041,351...56,044,697
JBrowse link
G RPS6 ribosomal protein S6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 9:19,375,715...19,380,236
Ensembl chr 9:19,375,715...19,380,236
JBrowse link
G RRP9 ribosomal RNA processing 9, U3 small nucleolar RNA binding protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 3:51,933,429...51,941,904
Ensembl chr 3:51,933,429...51,941,904
JBrowse link
G RUNX3 RUNX family transcription factor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 1:24,899,511...24,965,158
Ensembl chr 1:24,899,511...24,965,121
JBrowse link
G RXRB retinoid X receptor beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 6:33,193,588...33,200,991
Ensembl chr 6:33,193,588...33,200,665
JBrowse link
G SCRN1 secernin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 7:29,920,103...29,990,289
Ensembl chr 7:29,920,104...29,990,289
JBrowse link
G SELENBP1 selenium binding protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 PMID:19424620 NCBI chr 1:151,364,304...151,372,725
Ensembl chr 1:151,364,304...151,372,707
JBrowse link
G SERBP1 SERPINE1 mRNA binding protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 1:67,407,810...67,430,402
Ensembl chr 1:67,407,810...67,430,415
JBrowse link
G SERPINA1 serpin family A member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr14:94,376,747...94,390,654
Ensembl chr14:94,376,747...94,390,693
JBrowse link
G SERPINB2 serpin family B member 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr18:63,887,705...63,903,890
Ensembl chr18:63,871,692...63,903,888
JBrowse link
G SERPINE1 serpin family E member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SLC16A3 solute carrier family 16 member 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:27224918 NCBI chr17:82,217,951...82,240,086
Ensembl chr17:82,217,934...82,261,129
JBrowse link
G SLC1A2 solute carrier family 1 member 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21471434 NCBI chr11:35,251,205...35,420,058
Ensembl chr11:35,251,205...35,420,063
JBrowse link
G SMAD4 SMAD family member 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21105199 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
G SNAI1 snail family transcriptional repressor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr20:49,982,980...49,988,886
Ensembl chr20:49,982,980...49,988,886
JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr20:2,461,642...2,470,789
Ensembl chr20:2,461,634...2,470,853
JBrowse link
G SNX5 sorting nexin 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr20:17,941,600...17,968,794
Ensembl chr20:17,941,597...17,968,980
JBrowse link
G SOD2 superoxide dismutase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:10853026 PMID:14503839 PMID:19424620 PMID:25279216 NCBI chr 6:159,669,069...159,762,281
Ensembl chr 6:159,669,069...159,762,529
JBrowse link
G SPP1 secreted phosphoprotein 1 ISO RGD PMID:15735673 RGD:1581341 NCBI chr 4:87,975,714...87,983,411
Ensembl chr 4:87,975,667...87,983,532
JBrowse link
G SPRR2A small proline rich protein 2A EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 1:153,056,120...153,057,512
Ensembl chr 1:153,056,120...153,057,512
JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 ISO RGD PMID:16650383 RGD:1581318 NCBI chr 2:54,456,327...54,671,446
Ensembl chr 2:54,456,317...54,671,446
JBrowse link
G SPZ1 spermatogenic leucine zipper 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 5:80,320,002...80,321,842
Ensembl chr 5:80,319,625...80,321,842
JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr22:41,833,105...41,907,308
Ensembl chr22:41,833,079...41,907,307
JBrowse link
G STAT3 signal transducer and activator of transcription 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23382965 NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,540
JBrowse link
G SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 2:84,423,528...84,459,280
Ensembl chr 2:84,423,528...84,460,045
JBrowse link
G SYMPK symplekin scaffold protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr19:45,815,410...45,863,167
Ensembl chr19:45,815,410...45,863,194
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr17:35,809,484...35,847,242
Ensembl chr17:35,713,791...35,864,615
JBrowse link
G TBX3 T-box transcription factor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
G TFAP2C transcription factor AP-2 gamma EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
G TGFA transforming growth factor alpha EXP CTD Direct Evidence: therapeutic CTD PMID:15723263 NCBI chr 2:70,447,284...70,553,826
Ensembl chr 2:70,447,284...70,554,193
JBrowse link
G THBD thrombomodulin EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr20:23,045,633...23,049,672
Ensembl chr20:23,045,633...23,049,672
JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr22:32,801,705...32,863,041
Ensembl chr22:32,801,705...32,863,041
JBrowse link
G TMEM63A transmembrane protein 63A EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 1:225,840,556...225,882,720
Ensembl chr 1:225,845,536...225,882,380
JBrowse link
G TNF tumor necrosis factor EXP CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:1733439 PMID:15201584 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNFRSF9 TNF receptor superfamily member 9 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25279216 NCBI chr 1:7,915,871...7,941,607
Ensembl chr 1:7,915,871...7,943,165
JBrowse link
G TNFSF9 TNF superfamily member 9 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:6,531,026...6,535,924
Ensembl chr19:6,531,026...6,535,924
JBrowse link
G TP53 tumor protein p53 ISO
IAGP
EXP
ClinVar Annotator: match by term: Neoplasm of stomach
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:8198984 PMID:8203469 PMID:9865903 PMID:11040944 PMID:11391594 More... RGD:8547873 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TPM3 tropomyosin 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15378696 NCBI chr 1:154,155,308...154,192,100
Ensembl chr 1:154,155,304...154,194,648
JBrowse link
G TRAP1 TNF receptor associated protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr16:3,658,037...3,717,524
Ensembl chr16:3,651,639...3,717,553
JBrowse link
G TUBA1C tubulin alpha 1c EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr12:49,227,926...49,274,600
Ensembl chr12:49,188,736...49,274,600
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19806464 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636
JBrowse link
G TYMP thymidine phosphorylase EXP CTD Direct Evidence: marker/mechanism CTD PMID:18652704 NCBI chr22:50,525,752...50,530,085
Ensembl chr22:50,525,752...50,530,032
JBrowse link
G TYMS thymidylate synthetase EXP CTD Direct Evidence: marker/mechanism CTD PMID:15837757 PMID:18505590 PMID:18652704 PMID:19020767 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
G UBXN1 UBX domain protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr11:62,676,500...62,679,116
Ensembl chr11:62,676,498...62,679,117
JBrowse link
G ULBP2 UL16 binding protein 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr 6:149,941,947...149,949,235
Ensembl chr 6:149,942,014...149,949,235
JBrowse link
G UMPS uridine monophosphate synthetase EXP CTD Direct Evidence: marker/mechanism CTD PMID:16912530 PMID:17089033 PMID:18652704 NCBI chr 3:124,730,442...124,749,273
Ensembl chr 3:124,730,433...124,749,273
JBrowse link
G URM1 ubiquitin related modifier 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 9:128,371,319...128,392,016
Ensembl chr 9:128,371,361...128,392,016
JBrowse link
G WDR46 WD repeat domain 46 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 6:33,278,207...33,289,239
Ensembl chr 6:33,279,108...33,289,247
JBrowse link
G WIF1 WNT inhibitory factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr12:65,050,626...65,121,305
Ensembl chr12:65,050,626...65,121,305
JBrowse link
G WWOX WW domain containing oxidoreductase EXP CTD Direct Evidence: marker/mechanism CTD PMID:17575124 NCBI chr16:78,099,654...79,212,667
Ensembl chr16:78,099,400...79,212,667
JBrowse link
G XAF1 XIAP associated factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17087954 NCBI chr17:6,755,408...6,775,647
Ensembl chr17:6,755,447...6,775,647
JBrowse link
G XRCC1 X-ray repair cross complementing 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22452940 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473
JBrowse link
G XRCC3 X-ray repair cross complementing 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21347786 NCBI chr14:103,697,611...103,715,486
Ensembl chr14:103,697,609...103,715,504
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22037551 NCBI chr 3:114,314,500...115,147,288
Ensembl chr 3:114,314,500...115,147,288
JBrowse link
G ZNF160 zinc finger protein 160 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19424620 NCBI chr19:53,066,614...53,103,422
Ensembl chr19:53,066,606...53,103,434
JBrowse link
G ZNF177 zinc finger protein 177 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:9,363,013...9,382,617
Ensembl chr19:9,363,020...9,382,617
Ensembl chr19:9,363,020...9,382,617
JBrowse link
G ZNF559 zinc finger protein 559 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16367923 NCBI chr19:9,323,772...9,345,871
Ensembl chr19:9,323,772...9,351,162
JBrowse link
G ZNF593 zinc finger protein 593 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21364753 NCBI chr 1:26,169,908...26,170,873
Ensembl chr 1:26,169,908...26,170,873
JBrowse link
G ZNF667-AS1 ZNF667 antisense RNA 1 (head to head) EXP CTD Direct Evidence: marker/mechanism CTD PMID:29707199 NCBI chr19:56,477,874...56,495,437
Ensembl chr19:56,477,250...56,504,362
JBrowse link
cardia cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFR methylenetetrahydrofolate reductase no_association IAGP associated with stomach cancer;DNA:missense mutation:cds:g.677C>T (human) RGD PMID:24615072 RGD:38501052 NCBI chr 1:11,785,723...11,806,103
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
Carney Triad term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SDHA succinate dehydrogenase complex flavoprotein subunit A IAGP ClinVar Annotator: match by term: Carney triad
ClinVar Annotator: match by term: GASTRIC LEIOMYOSARCOMA, PULMONARY CHONDROMA, AND EXTRAADRENAL PARAGANGLIOMA
ClinVar PMID:20484225 PMID:21505157 PMID:21752896 PMID:22955521 PMID:22974104 More... NCBI chr 5:218,309...264,816
Ensembl chr 5:218,241...257,082
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B IAGP ClinVar Annotator: match by term: Carney triad ClinVar PMID:15987702 PMID:16288654 PMID:16317055 PMID:16912137 PMID:16916404 More... NCBI chr 1:17,018,722...17,054,032
Ensembl chr 1:17,018,722...17,054,032
JBrowse link
G SDHC succinate dehydrogenase complex subunit C IAGP ClinVar Annotator: match by term: Carney triad ClinVar PMID:9536098 PMID:12658451 PMID:17576681 PMID:17667967 PMID:17804857 More... NCBI chr 1:161,314,381...161,375,340
Ensembl chr 1:161,314,381...161,363,206
JBrowse link
gastric adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25326637 PMID:26619011 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G AKT1 AKT serine/threonine kinase 1 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:17611497 PMID:18256540 PMID:18392055 PMID:18504432 PMID:18611285 More... NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751
JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 IEP mRNA:increased expression:serosa of stomach (human) RGD PMID:15107827 RGD:13838842 NCBI chr12:47,075,707...47,079,959
Ensembl chr12:47,075,707...47,079,959
JBrowse link
G ARID1A AT-rich interaction domain 1A exacerbates
disease_progression
severity
IEP
HEP
mRNA, protein:decreased expression:mucosa of stomach (human)
protein:decreased expression:stomach (human)
mRNA:decreased expression:mucosa of stomach (human)
RGD PMID:22808142 PMID:25717252 PMID:24293408 RGD:125097488, RGD:126848753, RGD:125097521 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G B2M beta-2-microglobulin IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr15:44,711,492...44,718,145
Ensembl chr15:44,711,487...44,718,851
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:12068308 PMID:12198537 PMID:12960123 PMID:14679157 PMID:15035987 More... NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929
JBrowse link
G CALR calreticulin ameliorates ISO human cell line and construct in a mouse model RGD PMID:25619450 RGD:150521705 NCBI chr19:12,938,609...12,944,489
Ensembl chr19:12,938,578...12,944,489
JBrowse link
G CAT catalase IEP protein:decreased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chr11:34,438,934...34,472,060
Ensembl chr11:34,438,934...34,472,060
JBrowse link
G CD44 CD44 molecule (Indian blood group) disease_progression IDA mRNA, protein:splice variant, increased expression:stomach RGD PMID:16425351 RGD:2289356 NCBI chr11:35,139,168...35,232,402
Ensembl chr11:35,138,882...35,232,402
JBrowse link
G CDH1 cadherin 1 severity IAGP
HEP
ClinVar Annotator: match by term: Adenocarcinoma of stomach
mRNA:decreased expression:mucosa of stomach (human)
ClinVar
RGD
PMID:10896919 PMID:11968083 PMID:12588804 PMID:12944922 PMID:14500541 More... RGD:125097521 NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537
JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:7780957 PMID:8521414 PMID:8595405 PMID:8723678 PMID:9324288 More... NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301
JBrowse link
G CNOT9 CCR4-NOT transcription complex subunit 9 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr 2:218,568,578...218,597,080
Ensembl chr 2:218,568,580...218,597,080
JBrowse link
G CREBBP CREB binding protein IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:21390126 PMID:21680795 PMID:21796119 PMID:22832583 PMID:23334668 More... NCBI chr16:3,725,054...3,880,727
Ensembl chr16:3,725,054...3,880,713
JBrowse link
G CTNNB1 catenin beta 1 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:9065402 PMID:9065403 PMID:9294210 PMID:9927029 PMID:10027390 More... NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:15457249 PMID:16397024 PMID:16988931 PMID:18339846 PMID:18413839 More... NCBI chr17:39,688,094...39,728,660
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr12:56,080,108...56,103,505
Ensembl chr12:56,076,799...56,103,505
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25741868 PMID:26619011 NCBI chr 4:152,320,544...152,536,873
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:10766980 PMID:23819449 PMID:25741868 PMID:26619011 PMID:26822237 More... NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:7719344 PMID:8651276 PMID:9462761 PMID:9719378 PMID:10851026 More... NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G GNAS GNAS complex locus IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:1594625 PMID:1944469 PMID:2549426 PMID:3720010 PMID:7739708 More... NCBI chr20:58,839,681...58,911,192
Ensembl chr20:58,839,718...58,911,192
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 severity IEP mRNA:decreased expression:gastric adenocarcinoma (human) RGD PMID:23007704 RGD:9854641 NCBI chr 5:137,745,651...137,754,363
Ensembl chr 5:137,745,651...137,754,363
JBrowse link
G HRAS HRas proto-oncogene, GTPase IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 More... NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
JBrowse link
G IL1B interleukin 1 beta IEP protein:increased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chr 2:112,829,751...112,836,843
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL6 interleukin 6 IEP protein:increased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chr 7:22,725,889...22,732,002
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G IRF1 interferon regulatory factor 1 IAGP RGD PMID:9679752 RGD:1600013 NCBI chr 5:132,481,609...132,490,789
Ensembl chr 5:132,440,440...132,508,719
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:7530509 PMID:9438854 PMID:11073817 PMID:11276010 PMID:11526490 More... NCBI chr 4:54,657,957...54,740,715
Ensembl chr 4:54,657,918...54,740,715
JBrowse link
G KMT2D lysine methyltransferase 2D IMP RGD PMID:30177394 RGD:150521710 NCBI chr12:49,018,975...49,060,884
Ensembl chr12:49,018,978...49,060,794
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:2278970 PMID:3122217 PMID:12460918 PMID:15696205 PMID:16361624 More... NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LRRC56 leucine rich repeat containing 56 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 More... NCBI chr11:518,967...554,916
Ensembl chr11:537,527...554,912
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:23444215 PMID:25157968 PMID:26619011 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,837...66,491,544
JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:18042262 PMID:26619011 NCBI chr19:4,090,321...4,124,184
Ensembl chr19:4,090,321...4,124,122
JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 severity IEP
HEP
protein:increased expression:stomach (human)
protein:decreased expression: stomach (human)
RGD PMID:10854223 PMID:17116802 RGD:150429764, RGD:150429780 NCBI chr17:12,020,822...12,143,828
Ensembl chr17:12,020,829...12,143,830
JBrowse link
G MED12 mediator complex subunit 12 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr  X:71,118,596...71,142,450
Ensembl chr  X:71,118,556...71,142,454
JBrowse link
G MIR20A microRNA 20a IEP miRNA:increased expression:stomach, serum,extracellular exosome RGD PMID:27756776 RGD:25823155 NCBI chr13:91,351,065...91,351,135
Ensembl chr13:91,351,065...91,351,135
JBrowse link
G MLH1 mutL homolog 1 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:15340264 PMID:17510385 PMID:18307539 PMID:19419416 PMID:22136435 More... NCBI chr 3:36,993,487...37,050,846
Ensembl chr 3:36,993,350...37,050,846
JBrowse link
G MTOR mechanistic target of rapamycin kinase IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G NRAS NRAS proto-oncogene, GTPase IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:1654209 PMID:2278970 PMID:2407301 PMID:2674680 PMID:2989702 More... NCBI chr 1:114,704,469...114,716,771
Ensembl chr 1:114,704,469...114,716,771
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PMEPA1 prostate transmembrane protein, androgen induced 1 IEP mRNA:increased expression:stomach RGD PMID:11568975 RGD:2315108 NCBI chr20:57,648,396...57,711,472
Ensembl chr20:57,648,392...57,711,536
JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25228659 PMID:26619011 PMID:29352080 NCBI chr12:132,623,758...132,687,519
Ensembl chr12:132,623,753...132,687,376
JBrowse link
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25741868 PMID:26168268 PMID:26619011 NCBI chr19:52,190,052...52,229,518
Ensembl chr19:52,190,048...52,229,518
JBrowse link
G PTEN phosphatase and tensin homolog IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:9467011 PMID:9915974 PMID:10866302 PMID:11504908 PMID:11875759 More... NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,863,625...87,971,930
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 PMID:26822237 NCBI chr12:112,418,915...112,509,918
Ensembl chr12:112,418,351...112,509,918
JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:1760348 PMID:8601312 PMID:10064593 PMID:12077328 PMID:17603482 More... NCBI chr 3:12,583,601...12,664,117
Ensembl chr 3:12,583,601...12,664,125
JBrowse link
G RHOA ras homolog family member A IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998
JBrowse link
G SMAD4 SMAD family member 4 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:6604412 PMID:8898652 PMID:9214508 PMID:9285566 PMID:9582123 More... NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
G TP53 tumor protein p53 IAGP ClinVar Annotator: match by term: Adenocarcinoma of stomach
DNA:missense mutations, loss of heterozygosity:multiple
ClinVar
RGD
PMID:1349175 PMID:1359493 PMID:1565143 PMID:1565144 PMID:1569604 More... RGD:14995496 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
Gastric Adenocarcinoma and Proximal Polyposis of the Stomach term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway IAGP ClinVar Annotator: match by term: Gastric adenocarcinoma and proximal polyposis of the stomach OMIM
ClinVar
PMID:21813476 PMID:22027476 PMID:27087319 PMID:27343414 PMID:28492532 More... NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,498...112,846,239
JBrowse link
gastric body carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNMT3B DNA methyltransferase 3 beta IEP RGD PMID:20127025 RGD:9589084 NCBI chr20:32,762,385...32,809,356
Ensembl chr20:32,762,385...32,809,356
JBrowse link
gastric cardia adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin disease_progression IEP RGD PMID:15585392 RGD:11035298 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
gastric papillary adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI1 GLI family zinc finger 1 IEP protein:increased expression:stomach RGD PMID:17259107 RGD:150340552 NCBI chr12:57,459,785...57,472,451
Ensembl chr12:57,459,785...57,472,268
JBrowse link
G SMO smoothened, frizzled class receptor IEP protein:increased expression:stomach RGD PMID:17259107 RGD:150340552 NCBI chr 7:129,188,633...129,213,548
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
gastric tubular adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI1 GLI family zinc finger 1 IEP protein:increased expression:stomach RGD PMID:17259107 RGD:150340552 NCBI chr12:57,459,785...57,472,451
Ensembl chr12:57,459,785...57,472,268
JBrowse link
G SMO smoothened, frizzled class receptor IEP protein:increased expression:stomach RGD PMID:17259107 RGD:150340552 NCBI chr 7:129,188,633...129,213,548
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
Gastro-Enteropancreatic Neuroendocrine Tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase disease_progression IEP associated with Neoplasm Metastasis;mRNA, protein: decreased expression:gastrointestinal system, multiple (human) RGD PMID:22485171 RGD:150340716 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,223,044...108,369,102
JBrowse link
G ATRX ATRX chromatin remodeler severity IEP RGD PMID:26026117 RGD:127285385 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G CD53 CD53 molecule EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 1:110,871,167...110,899,928
Ensembl chr 1:110,871,188...110,899,922
JBrowse link
G CD86 CD86 molecule EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 3:122,055,362...122,121,136
Ensembl chr 3:122,055,362...122,121,139
JBrowse link
G CIITA class II major histocompatibility complex transactivator EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr16:10,866,208...10,941,562
Ensembl chr16:10,866,222...10,943,021
JBrowse link
G DAXX death domain associated protein severity IEP RGD PMID:26026117 RGD:127285385 NCBI chr 6:33,318,558...33,322,959
Ensembl chr 6:33,318,558...33,323,016
JBrowse link
G EOMES eomesodermin EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 3:27,715,953...27,722,713
Ensembl chr 3:27,715,949...27,722,711
JBrowse link
G GATA3 GATA binding protein 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr10:8,045,420...8,075,198
Ensembl chr10:8,045,378...8,075,198
JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 1:92,473,043...92,486,925
Ensembl chr 1:92,473,043...92,486,925
JBrowse link
G IKZF1 IKAROS family zinc finger 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 7:50,303,453...50,405,101
Ensembl chr 7:50,304,068...50,405,101
JBrowse link
G IKZF3 IKAROS family zinc finger 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr17:39,757,715...39,864,312
Ensembl chr17:39,757,718...39,864,312
JBrowse link
G IL10 interleukin 10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G IL2RB interleukin 2 receptor subunit beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr22:37,125,838...37,175,118
Ensembl chr22:37,125,843...37,175,054
JBrowse link
G NOTCH2 notch receptor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G POU2F2 POU class 2 homeobox 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr19:42,086,110...42,197,931
Ensembl chr19:42,086,110...42,196,585
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 1:198,639,025...198,757,476
Ensembl chr 1:198,638,457...198,757,476
JBrowse link
G RUNX3 RUNX family transcription factor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 1:24,899,511...24,965,158
Ensembl chr 1:24,899,511...24,965,121
JBrowse link
G SERPINA1 serpin family A member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr14:94,376,747...94,390,654
Ensembl chr14:94,376,747...94,390,693
JBrowse link
hereditary diffuse gastric cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH1 cadherin 1 IAGP ClinVar Annotator: match by term: Hereditary diffuse gastric cancer ClinVar
OMIM
PMID:2317870 PMID:2449335 PMID:8033105 PMID:8075649 PMID:8127895 More... NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IAGP ClinVar Annotator: match by term: Hereditary diffuse gastric cancer ClinVar PMID:12110640 PMID:14982869 PMID:17056636 PMID:17324647 PMID:18628094 More... NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LOC112486201 Sharpr-MPRA regulatory region 4224 IAGP ClinVar Annotator: match by term: Hereditary diffuse gastric cancer ClinVar PMID:26556299 PMID:28492532 NCBI chr16:68,772,106...68,772,400 JBrowse link
linitis plastica term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSCA prostate stem cell antigen EXP CTD Direct Evidence: marker/mechanism CTD PMID:18488030 NCBI chr 8:142,670,297...142,682,725
Ensembl chr 8:142,670,308...142,682,725
JBrowse link
stomach cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase IEP human cells in mouse model; associated with mental depression; protein:increased expression, increased phosphorylation:stomach (human) RGD PMID:31396300 RGD:126908003 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,016...130,887,675
JBrowse link
G ACE angiotensin I converting enzyme susceptibility IAGP DNA:insertion/deletion, haplotype:intron 16: RGD PMID:17035401 RGD:39939122 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G ADAR adenosine deaminase RNA specific exacerbates IEP mRNA:increased expression:mucosa of stomach (human) RGD PMID:30563560 RGD:14700703 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,581,695...154,628,013
JBrowse link
G ADGRB1 adhesion G protein-coupled receptor B1 disease_progression IEP RGD PMID:11172604 RGD:13831357 NCBI chr 8:142,449,649...142,545,009
Ensembl chr 8:142,449,430...142,545,009
JBrowse link
G AGAP2-AS1 AGAP2 antisense RNA 1 disease_progression IEP RGD PMID:28209205 RGD:13838846 NCBI chr12:57,726,240...57,728,356
Ensembl chr12:57,726,271...57,728,356
JBrowse link
G AKR1B1 aldo-keto reductase family 1 member B IEP mRNA:decreased expression:stomach (human) RGD PMID:23808167 RGD:8548675 NCBI chr 7:134,442,350...134,459,239
Ensembl chr 7:134,442,356...134,459,284
JBrowse link
G ANXA1 annexin A1 ISO RGD PMID:23236538 RGD:7421587 NCBI chr 9:73,151,865...73,170,393
Ensembl chr 9:73,151,865...73,170,393
JBrowse link
G APC APC regulator of WNT signaling pathway IEA
IAGP
OMIM:613659
ClinVar Annotator: match by term: Stomach cancer
MouseDO
ClinVar
PMID:1316610 PMID:1317264 PMID:8381579 PMID:9824584 PMID:10094547 More... NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,498...112,846,239
JBrowse link
G ARID1A AT-rich interaction domain 1A treatment
susceptibility
exacerbates
disease_progression
IMP
IAGP
HEP
IEP
human gene in mouse model
DNA:missense mutation, nonsense mutation:exon 9: Pro912Thr (C>A), Gln920Ter (C >T) (Human)
protein:decreased expression:stomach (human)
associated with Epstein-Barr Virus Infections;protein:decreased expression:stomach (human)
mRNA:decreased expression:stomach (human)
RGD PMID:27323812 PMID:32377988 PMID:26637902 PMID:30664822 PMID:30747208 More... RGD:125097523, RGD:126848772, RGD:126848744, RGD:126848733, RGD:126790641, RGD:126790633, RGD:126781773, RGD:126781725, RGD:126781706, RGD:126781705, RGD:126781704, RGD:125097489 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G ARID1B AT-rich interaction domain 1B disease_progression HEP protein:decreased expression:stomach (human) RGD PMID:26637902 RGD:126848744 NCBI chr 6:156,776,026...157,210,779
Ensembl chr 6:156,776,020...157,210,779
JBrowse link
G ARID2 AT-rich interaction domain 2 onset HEP protein:decreased expression:stomach (human) RGD PMID:26637902 RGD:126848744 NCBI chr12:45,729,706...45,908,037
Ensembl chr12:45,729,706...45,908,040
JBrowse link
G ARPC1B actin related protein 2/3 complex subunit 1B IEP mRNA:decreased expression:gastric epithelium (human) RGD PMID:15279900 RGD:11046270 NCBI chr 7:99,374,254...99,394,816
Ensembl chr 7:99,374,249...99,394,816
JBrowse link
G ASPM assembly factor for spindle microtubules IEP mRNA,protein:increased expression:stomach: RGD PMID:26178168 RGD:13439749 NCBI chr 1:197,084,127...197,146,669
Ensembl chr 1:197,084,121...197,146,694
JBrowse link
G ATM ATM serine/threonine kinase severity HEP
IEP
protein:decreased expression:mucosa of stomach (human)
protein:decreased phosphorylation:stomach (human)
mRNA:decreased expression:stomach (human)
RGD PMID:23649938 PMID:17928013 PMID:17928013 RGD:150340700, RGD:150340715, RGD:150340715 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,223,044...108,369,102
JBrowse link
G ATP4B ATPase H+/K+ transporting subunit beta IDA DNA:hypermethylation:exon, stomach, plasma RGD PMID:23317218 RGD:14696738 NCBI chr13:113,648,804...113,658,198
Ensembl chr13:113,648,804...113,658,198
JBrowse link
G BAMBI BMP and activin membrane bound inhibitor disease_progression IEP RGD PMID:24752577 RGD:14390158 NCBI chr10:28,677,521...28,682,932
Ensembl chr10:28,677,510...28,682,932
JBrowse link
G BARHL2 BarH like homeobox 2 treatment IEP RGD PMID:27441821 RGD:14392685 NCBI chr 1:90,711,539...90,717,302
Ensembl chr 1:90,711,539...90,717,302
JBrowse link
G BAX BCL2 associated X, apoptosis regulator treatment IEP human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chr19:48,954,825...48,961,798
Ensembl chr19:48,954,815...48,961,798
JBrowse link
G BCL2 BCL2 apoptosis regulator treatment IEP human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chr18:63,123,346...63,320,280
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G BCL2L1 BCL2 like 1 ameliorates IDA human cells in mouse model RGD PMID:26432329 RGD:150520156 NCBI chr20:31,664,452...31,723,963
Ensembl chr20:31,664,452...31,723,989
JBrowse link
G BCOR BCL6 corepressor disease_progression IAGP RGD PMID:33145269 RGD:150340707 NCBI chr  X:40,051,246...40,177,390
Ensembl chr  X:40,049,815...40,177,329
JBrowse link
G BRCA1 BRCA1 DNA repair associated susceptibility
treatment
IAGP
IEP
DNA:SNP: :rs799917 (human) RGD PMID:25266802 PMID:23633032 RGD:126925956, RGD:126925962 NCBI chr17:43,044,295...43,125,364
Ensembl chr17:43,044,295...43,170,245
JBrowse link
G BST2 bone marrow stromal cell antigen 2 disease_progression IEP RGD PMID:26832883 RGD:14398496 NCBI chr19:17,402,939...17,405,630
Ensembl chr19:17,402,939...17,405,630
JBrowse link
G CALR calreticulin disease_progression
exacerbates
IEP protein:increased expression:stomach (human) RGD PMID:31725767 PMID:19050968 RGD:150521680, RGD:150521686 NCBI chr19:12,938,609...12,944,489
Ensembl chr19:12,938,578...12,944,489
JBrowse link
G CAPN9 calpain 9 IAGP RGD PMID:10835488 RGD:734688 NCBI chr 1:230,747,289...230,803,356
Ensembl chr 1:230,747,384...230,802,003
JBrowse link
G CASP10 caspase 10 IEA
IAGP
OMIM:613659
ClinVar Annotator: match by term: Stomach cancer
MouseDO
ClinVar
PMID:11973654 PMID:28492532 NCBI chr 2:201,182,885...201,229,406
Ensembl chr 2:201,182,898...201,229,406
JBrowse link
G CASP3 caspase 3 treatment
ameliorates
IEP
IDA
human cells in mouse model RGD PMID:29408335 PMID:26432329 PMID:32106377 RGD:127284846, RGD:150520156, RGD:127284886 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,649,509
JBrowse link
G CASP9 caspase 9 treatment IEP human cells in mouse model RGD PMID:29408335 PMID:32106377 RGD:127284846, RGD:127284886 NCBI chr 1:15,491,401...15,524,912
Ensembl chr 1:15,490,832...15,526,534
JBrowse link
G CBX7 chromobox 7 disease_progression IEP protein:increased expression:stomach: RGD PMID:20723236 RGD:9587358 NCBI chr22:39,130,772...39,152,680
Ensembl chr22:39,120,167...39,152,680
JBrowse link
G CD1D CD1d molecule disease_progression IEP mRNA:splice variant:pyloric antrum (human)) RGD PMID:26119195 RGD:11074500 NCBI chr 1:158,178,030...158,186,427
Ensembl chr 1:158,178,030...158,186,427
JBrowse link
G CD274 CD274 molecule disease_progression IEP RGD PMID:32380498 PMID:32089413 RGD:40818238, RGD:41410803 NCBI chr 9:5,450,542...5,470,554
Ensembl chr 9:5,450,503...5,470,566
JBrowse link
G CD8A CD8a molecule ameliorates IEP associated with Epstein-Barr Virus Infections;mRNA:increased expression:stomach (human)
protein:decreased expression:stomach, T cell (human)
RGD PMID:29915957 PMID:30106451 RGD:124715442, RGD:124715443 NCBI chr 2:86,784,605...86,808,396
Ensembl chr 2:86,784,610...86,808,396
JBrowse link
G CDH1 cadherin 1 IAGP ClinVar Annotator: match by term: Gastric cancer, familial diffuse, and cleft lip with or without cleft palate ClinVar PMID:15831593 PMID:17221870 PMID:17545690 PMID:17576681 PMID:18427545 More... NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537
JBrowse link
G CSF1R colony stimulating factor 1 receptor exacerbates IEP mRNA:increased expression:stomach (human) RGD PMID:29767252 RGD:150524281 NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 IAGP RGD PMID:16270381 RGD:14700945 NCBI chr15:74,719,542...74,725,528
Ensembl chr15:74,719,542...74,725,536
JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 disease_progression IAGP RGD PMID:22957075 RGD:14700909 NCBI chr10:133,527,363...133,539,123
Ensembl chr10:133,520,406...133,561,220
JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 severity
ameliorates
disease_progression
exacerbates
IEP
IMP
IDA
RGD PMID:27010547 PMID:26934957 PMID:26934957 PMID:27010547 RGD:150429704, RGD:150429705, RGD:150429705, RGD:150429704 NCBI chr 1:162,630,863...162,787,405
Ensembl chr 1:162,631,373...162,787,405
JBrowse link
G DICER1 dicer 1, ribonuclease III disease_progression IEP RGD PMID:18167183 RGD:149735323 NCBI chr14:95,086,228...95,158,010
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha susceptibility IAGP DNA:polymorphism:promoter:-488A>G(rs36012910)(human) RGD PMID:20128888 RGD:9589068 NCBI chr 2:25,227,874...25,342,590
Ensembl chr 2:25,227,855...25,342,590
JBrowse link
G EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 IEP protein:decreased expression:stomach: RGD PMID:21789020 RGD:10401218 NCBI chr 6:8,073,360...8,102,548
Ensembl chr 6:8,073,360...8,102,559
JBrowse link
G EGFR epidermal growth factor receptor treatment ISO associated with Helicobacter Infections RGD PMID:28473630 RGD:38599214 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 IEA
IAGP
OMIM:613659
ClinVar Annotator: match by term: Stomach cancer
MouseDO
ClinVar
PMID:15457249 PMID:18339846 PMID:25157968 NCBI chr17:39,688,094...39,728,660
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit treatment
severity
no_association
disease_progression
IEP
IAGP
DNA:snp:3' utr:c.*197G>T (rs3212986) (human)
DNA:snp:intron:c.-7-277G>T (human) (rs2298881)
DNA:snps:exon, intron:c.354T>C, c.-7-277G>T (human) (rs11615, rs2298881)
DNA:SNP:exon:354C>T (human)
RGD PMID:23338051 PMID:27173253 PMID:24793015 PMID:24318989 PMID:26499900 RGD:11252163, RGD:13207427, RGD:13207425, RGD:13207309, RGD:11340202 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit disease_progression IAGP DNA:SNP:exon:p.K751Q (2251A>C) (rs13181) (human) RGD PMID:26499900 RGD:11340202 NCBI chr19:45,349,837...45,370,647
Ensembl chr19:45,349,837...45,370,918
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit treatment
disease_progression
susceptibility
IMP
IEP
IAGP
DNA:SNPs: :multiple RGD PMID:25595591 PMID:16734726 PMID:22228224 RGD:14928319, RGD:126781698, RGD:126779605 NCBI chr 7:148,807,374...148,884,344
Ensembl chr 7:148,807,257...148,884,321
JBrowse link
G FANCI FA complementation group I IAGP ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:28875981 NCBI chr15:89,243,973...89,317,259
Ensembl chr15:89,243,945...89,317,261
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 severity IEP
IEA
protein:increased expression:stomach (human)
OMIM:613659
MouseDO
RGD
PMID:9816310 RGD:12801419 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FGFR4 fibroblast growth factor receptor 4 severity
ameliorates
treatment
IEP
IMP
IDA
IAGP
protein:increased expression:stomach, cytoplasm (human)
human cells in mouse model
DNA:SNP:exon 9: p.G388R (human)
RGD PMID:21567388 PMID:26432329 PMID:32973082 PMID:20844967 RGD:150520025, RGD:150520156, RGD:150520068, RGD:150520039 NCBI chr 5:177,086,915...177,098,144
Ensembl chr 5:177,086,905...177,098,144
JBrowse link
G GLDC glycine decarboxylase IEP mRNA:decreased expression:stomach: RGD PMID:26722042 RGD:12904663 NCBI chr 9:6,532,467...6,645,729
Ensembl chr 9:6,532,467...6,645,729
JBrowse link
G GSTM1 glutathione S-transferase mu 1 susceptibility
no_association
IAGP DNA:deletion:cds (human) RGD PMID:1427788 PMID:16273625 PMID:12406553 PMID:15112335 PMID:11957090 More... RGD:7488951, RGD:14700977, RGD:14700964, RGD:14700949, RGD:14700947, RGD:14700946, RGD:14700945, RGD:14700936 NCBI chr 1:109,687,817...109,693,745
Ensembl chr 1:109,687,814...109,709,039
JBrowse link
G GSTT1 glutathione S-transferase theta 1 IAGP associated with Helicobacter Infections RGD PMID:16886896 PMID:11819818 PMID:22139978 RGD:14700936, RGD:14700994, RGD:14700984
G HDAC2 histone deacetylase 2 disease_progression IEP
IMP
RGD PMID:15865607 PMID:23175521 RGD:9590322, RGD:9590325 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308
JBrowse link
G HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 susceptibility IAGP associated with Helicobacter Infections;DNA:polymorphism: :HLA-DQA1*0503 (human) RGD PMID:15622476 RGD:126928143 NCBI chr 6:32,637,406...32,654,846
Ensembl chr 6:32,628,179...32,647,062
JBrowse link
G HTRA2 HtrA serine peptidase 2 IEP protein:increased expression:gastric mucosa (human) RGD PMID:12887511 RGD:5688748 NCBI chr 2:74,529,405...74,533,556
Ensembl chr 2:74,529,725...74,533,332
JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 disease_progression HEP
IEP
protein:decreased expression:stomach (human) RGD PMID:27466503 PMID:25098926 RGD:149735569, RGD:149735841 NCBI chr15:90,083,045...90,102,468
Ensembl chr15:90,083,045...90,102,477
JBrowse link
G IL10 interleukin 10 IAGP
IEP
DNA:SNP:promoter:-819C>T (rs1800871) (human) RGD PMID:28002581 PMID:30610790 RGD:14975135, RGD:14975253 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G IL1B interleukin 1 beta susceptibility IAGP
IEA
IEP
DNA:polymorphism:promoter:-31T>C (human)
OMIM:613659
associated with mental depression; human cells in mouse model; protein:increased expression:blood serum, stomach (human)
MouseDO
RGD
PMID:21653279 PMID:31396300 RGD:7401222, RGD:126908003 NCBI chr 2:112,829,751...112,836,843
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1RN interleukin 1 receptor antagonist IEA OMIM:613659 MouseDO NCBI chr 2:113,099,365...113,134,016
Ensembl chr 2:113,107,214...113,134,016
JBrowse link
G IL32 interleukin 32 susceptibility IEP
IAGP
associated with Helicobacter Infections; protein:increased expression:stomach (human)
associated with Helicobacter Infections;DNA:SNP:enhancer:g.3123561T>A (rs2015620) (human)
RGD PMID:22890997 PMID:26358252 RGD:150340737, RGD:150340747 NCBI chr16:3,065,403...3,069,530
Ensembl chr16:3,065,297...3,082,192
JBrowse link
G IL6 interleukin 6 no_association IEP
IAGP
human cells in mouse model;associated with mental depression; protein:increased expression:blood serum, stomach (human)
DNA:SNPs: :rs6949149 (human)
DNA:SNPs: :rs1800796, rs10499563 (human)
DNA:SNP: :rs2069837 (human)
RGD PMID:30610790 PMID:31396300 PMID:28442395 PMID:28442395 PMID:27049718 RGD:14975253, RGD:126908003, RGD:14975291, RGD:14975291, RGD:14975290 NCBI chr 7:22,725,889...22,732,002
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G IL6R interleukin 6 receptor IAGP DNA:SNP: :rs2228145 (human) RGD PMID:28442395 RGD:14975291 NCBI chr 1:154,405,343...154,469,450
Ensembl chr 1:154,405,193...154,469,450
JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer ISS OMIM:137215 | OMIM:613659 MouseDO NCBI chr 5:55,935,095...55,994,963
Ensembl chr 5:55,935,095...55,995,022
JBrowse link
G IRF1 interferon regulatory factor 1 IEA
IAGP
OMIM:613659
ClinVar Annotator: match by term: Stomach cancer
MouseDO
ClinVar
PMID:9679752 NCBI chr 5:132,481,609...132,490,789
Ensembl chr 5:132,440,440...132,508,719
JBrowse link
G JAK1 Janus kinase 1 severity IAGP DNA:frameshift mutations
DNA:SNP: :rs2230587A (human)
RGD PMID:29121062 PMID:27049718 RGD:150524355, RGD:14975290 NCBI chr 1:64,833,229...65,067,746
Ensembl chr 1:64,833,229...65,067,754
JBrowse link
G JAK2 Janus kinase 2 susceptibility
treatment
IAGP
IEP
DNA:SNPs:exon, promoter: (rs2230724, rs1887427) (human)
human cells in mouse model
associated with Helicobacter Infections; protein:increased expression:stomach (human)
RGD PMID:23717640 PMID:32106377 PMID:29408335 PMID:24718681 RGD:126925979, RGD:127284886, RGD:127284846, RGD:126928128 NCBI chr 9:4,984,390...5,129,948
Ensembl chr 9:4,984,390...5,129,948
JBrowse link
G KCNA5 potassium voltage-gated channel subfamily A member 5 IEP protein:increased expression:gastric mucosa (human) RGD PMID:16258262 RGD:9686069 NCBI chr12:5,043,879...5,046,788
Ensembl chr12:5,043,879...5,046,788
JBrowse link
G KDM4B lysine demethylase 4B severity
treatment
IEP
IMP
mRNA:increased expression:gastric mucosa (human)
human gene in a mouse model
RGD PMID:22133676 PMID:24077348 PMID:22133676 RGD:9587739, RGD:9587753, RGD:9587739 NCBI chr19:4,969,087...5,153,603
Ensembl chr19:4,969,113...5,153,598
JBrowse link
G KDM6A lysine demethylase 6A exacerbates IAGP DNA:mutations:multiple (human) RGD PMID:32867456 RGD:150520203 NCBI chr  X:44,873,182...45,112,779
Ensembl chr  X:44,873,188...45,112,779
JBrowse link
G KDR kinase insert domain receptor disease_progression
no_association
IAGP DNA:SNP: :rs1870377 (human)
DNA:SNPs: :rs7667298, rs2071559, rs2305948 (human)
RGD PMID:30380970 PMID:30380970 RGD:126907999, RGD:126907999 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G KIF18A kinesin family member 18A disease_progression IEP RGD PMID:27215532 RGD:11554202 NCBI chr11:28,020,619...28,108,180
Ensembl chr11:28,020,619...28,108,156
JBrowse link
G KLF6 Kruppel like factor 6 IEA
IAGP
OMIM:613659
ClinVar Annotator: match by term: Stomach cancer
MouseDO
ClinVar
NCBI chr10:3,775,996...3,785,209
Ensembl chr10:3,775,996...3,785,281
JBrowse link
G KMT2D lysine methyltransferase 2D disease_progression IEP protein:increased expression:stomach RGD PMID:30177394 RGD:150521710 NCBI chr12:49,018,975...49,060,884
Ensembl chr12:49,018,978...49,060,794
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IAGP
IEA
ClinVar Annotator: match by term: Stomach cancer
OMIM:613659
ClinVar
MouseDO
PMID:7773929 PMID:12460918 PMID:15696205 PMID:16361624 PMID:16618717 More... NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LRP1B LDL receptor related protein 1B IDA DNA:hypermethylation RGD PMID:20095042 RGD:150429774 NCBI chr 2:140,231,423...142,132,463
Ensembl chr 2:140,231,423...142,131,016
JBrowse link
G MIR125A microRNA 125a disease_progression
severity
IEP RGD PMID:30117667 PMID:22322911 RGD:21403678, RGD:21408544 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339
JBrowse link
G MIR146A microRNA 146a ameliorates IEP associated with Helicobacter Infections;miRNA:increased expression:stomach (human) RGD PMID:25081668 RGD:126925145 NCBI chr 5:160,485,352...160,485,450
Ensembl chr 5:160,485,352...160,485,450
JBrowse link
G MIR152 microRNA 152 disease_progression IEP
IAGP
miRNA:decreased expression:stomach
DNA:SNPs, haplotypes
RGD PMID:28427226 PMID:25261463 PMID:20422307 RGD:19165143, RGD:21066330, RGD:19165151 NCBI chr17:48,037,161...48,037,247
Ensembl chr17:48,037,161...48,037,247
JBrowse link
G MIR155 microRNA 155 disease_progression IEP miRNA:decreased expression:stomach RGD PMID:31103022 PMID:29250766 PMID:30008945 RGD:21081514, RGD:21408595, RGD:21403680 NCBI chr21:25,573,980...25,574,044
Ensembl chr21:25,573,980...25,574,044
JBrowse link
G MIR223 microRNA 223 IEP associated with Helicobacter Infections; mRNA:increased expression:stomach (human) RGD PMID:29317648 RGD:126781705 NCBI chr  X:66,018,870...66,018,979
Ensembl chr  X:66,018,870...66,018,979
JBrowse link
G MIR30A microRNA 30a severity
treatment
IEP
ISO
RGD PMID:32116236 PMID:32116236 RGD:35673292, RGD:35673292 NCBI chr 6:71,403,551...71,403,621
Ensembl chr 6:71,403,551...71,403,621
JBrowse link
G MIR335 microRNA 335 severity IEP RGD PMID:21822301 RGD:14394425 NCBI chr 7:130,496,111...130,496,204
Ensembl chr 7:130,496,111...130,496,204
JBrowse link
G MIR375 microRNA 375 IEP associated with Helicobacter Infections; protein:decreased expression:stomach (human) RGD PMID:24718681 RGD:126928128 NCBI chr 2:219,001,645...219,001,708
Ensembl chr 2:219,001,645...219,001,708
JBrowse link
G MKI67 marker of proliferation Ki-67 treatment IEP human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chr10:128,096,659...128,126,423
Ensembl chr10:128,096,659...128,126,423
JBrowse link
G MMP9 matrix metallopeptidase 9 ameliorates IDA human cells in mouse model RGD PMID:26432329 RGD:150520156 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MT-CO2 mitochondrially encoded cytochrome c oxidase II IEP human cells in mouse model;associated with mental depression; protein:increased expression:blood serum, stomach (mouse) RGD PMID:31396300 RGD:126908003 NCBI chr MT:7,586...8,269
Ensembl chr MT:7,586...8,269
JBrowse link
G MTHFR methylenetetrahydrofolate reductase no_association IAGP DNA:missense mutation:cds:g.677C>T (human) RGD PMID:24615072 PMID:23183616 RGD:38501052, RGD:38501056 NCBI chr 1:11,785,723...11,806,103
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G MUTYH mutY DNA glycosylase IAGP
IEA
ClinVar Annotator: match by term: Stomach cancer
OMIM:613659
ClinVar
MouseDO
PMID:11818965 PMID:12606733 PMID:15180946 PMID:15273732 PMID:15890374 More... NCBI chr 1:45,329,242...45,340,447
Ensembl chr 1:45,329,163...45,340,893
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor onset
ameliorates
ISO associated with Helicobacter Infections RGD PMID:24166959 PMID:23728346 RGD:150519913, RGD:150519918 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,478...38,143,022
JBrowse link
G NDC80 NDC80 kinetochore complex component IEP mRNA:increased expression:stomach RGD PMID:19878654 RGD:28867241 NCBI chr18:2,571,557...2,616,635
Ensembl chr18:2,571,557...2,616,635
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 IEP human cells in mouse model; associated with mental depression; protein:increased phosphorylation:stomach (human) RGD PMID:31396300 RGD:126908003 NCBI chr 4:102,501,266...102,617,302
Ensembl chr 4:102,501,331...102,617,302
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 ameliorates IMP RGD PMID:30452981 RGD:150519920 NCBI chr15:87,859,749...88,256,796
Ensembl chr15:87,859,751...88,256,768
JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex IEP mRNA:increased expression:stomach RGD PMID:19878654 PMID:19081476 RGD:28867241, RGD:28867243 NCBI chr 1:163,321,948...163,355,764
Ensembl chr 1:163,266,576...163,355,764
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 treatment IEP human cells in a mouse model
human cells in mouse model
RGD PMID:29408335 PMID:32106377 RGD:127284846, RGD:127284886 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154
JBrowse link
G PCNA proliferating cell nuclear antigen ameliorates IDA human cells in mouse model RGD PMID:26432329 RGD:150520156 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626
JBrowse link
G PDCD1 programmed cell death 1 disease_progression IEP associated with Epstein-Barr Virus Infections RGD PMID:32380498 PMID:27465786 RGD:40818238, RGD:41410790 NCBI chr 2:241,849,881...241,858,908
Ensembl chr 2:241,849,884...241,858,894
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha disease_progression IAGP
IEA
IEP
associated with Epstein-Barr Virus Infections; DNA,protein:mutations:exon:
OMIM:613659
protein:increased expression:stomach (human)
Epstein-Barr Virus negative patient
MouseDO
RGD
PMID:30952761 PMID:30747208 PMID:26980034 RGD:40818110, RGD:126790641, RGD:40818111 NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PTCH1 patched 1 disease_progression
severity
IEP
IDA
DNA:hypermethylation:promoter RGD PMID:23371028 PMID:22456124 PMID:23440386 PMID:19673023 RGD:150523836, RGD:150523844, RGD:150523843, RGD:150523838 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G PTEN phosphatase and tensin homolog IEP protein:decreased expression:stomach (human) RGD PMID:27572739 RGD:127285615 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,863,625...87,971,930
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 IAGP DNA:SNPs::rs12229892, rs2301756(human) RGD PMID:27614952 RGD:39128246 NCBI chr12:112,418,915...112,509,918
Ensembl chr12:112,418,351...112,509,918
JBrowse link
G RUNX1 RUNX family transcription factor 1 disease_progression IEP mRNA:decreased expression:stomach RGD PMID:15386419 RGD:126775146 NCBI chr21:34,787,801...35,049,334
Ensembl chr21:34,787,801...36,004,667
JBrowse link
G RUNX3 RUNX family transcription factor 3 disease_progression IEP mRNA:decreased expression:stomach RGD PMID:15386419 RGD:126775146 NCBI chr 1:24,899,511...24,965,158
Ensembl chr 1:24,899,511...24,965,121
JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase exacerbates IEP mRNA:decreased expression:stomach (human) RGD PMID:29522714 RGD:150429638 NCBI chr 3:47,016,431...47,164,113
Ensembl chr 3:47,016,429...47,164,113
JBrowse link
G SHH sonic hedgehog signaling molecule disease_progression IEP RGD PMID:22456124 RGD:150523844 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SMO smoothened, frizzled class receptor treatment
disease_progression
IEP
ISO
mRNA:increased expression:liver RGD PMID:28350784 PMID:16339184 PMID:28350784 RGD:150340549, RGD:150340550, RGD:150340549 NCBI chr 7:129,188,633...129,213,548
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
G SOD2 superoxide dismutase 2 IDA RGD PMID:12469139 RGD:1581255 NCBI chr 6:159,669,069...159,762,281
Ensembl chr 6:159,669,069...159,762,529
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase treatment IEP human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chr20:37,344,690...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 IEP mRNA:increased expression:stomach (human) RGD PMID:20938052 RGD:11038731 NCBI chr17:58,000,919...58,007,273
Ensembl chr17:58,000,919...58,007,346
JBrowse link
G STAT3 signal transducer and activator of transcription 3 treatment IEP human cells in mouse model, associated with mental depression; protein:increased phosphorylation:stomach (human) RGD PMID:31396300 PMID:29408335 RGD:126908003, RGD:127284846 NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,540
JBrowse link
G SULT1A1 sulfotransferase family 1A member 1 susceptibility IAGP DNA:missense mutation:cds:p.R213H (human) RGD PMID:16137826 RGD:1581452 NCBI chr16:28,605,258...28,623,395
Ensembl chr16:28,603,944...28,623,625
JBrowse link
G TERF1 telomeric repeat binding factor 1 IEP protein:increased expression:gastric mucosa (human) RGD PMID:20127252 RGD:2317220 NCBI chr 8:73,008,856...73,048,123
Ensembl chr 8:73,008,856...73,048,123
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 disease_progression
treatment
severity
IEP
IMP
mRNA, protein:decreased expression:stomach (human)
human cells in mouse model
mRNA:decreased expression:stomach (human)
associated with Neoplasm Metastasis; human cells in mouse model
RGD PMID:27027260 PMID:33058920 PMID:31242038 PMID:31242038 RGD:150429612, RGD:150429654, RGD:150429653, RGD:150429653 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816
JBrowse link
G TFF1 trefoil factor 1 ISS OMIM:137215 | OMIM:613659 MouseDO NCBI chr21:42,362,282...42,366,535
Ensembl chr21:42,362,282...42,366,535
JBrowse link
G TP53 tumor protein p53 IAGP DNA:missense mutation::p.R337H (human)
DNA:frameshift mutations,nonsense mutations, missense mutations: : multiple
RGD PMID:28387921 PMID:27323394 RGD:14995484, RGD:14995495 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TXNIP thioredoxin interacting protein ISO mRNA:decreased expression:stomach RGD PMID:12553030 RGD:1642760 NCBI chr 1:145,992,435...145,996,579
Ensembl chr 1:145,992,435...145,996,579
JBrowse link
stomach carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A disease_progression HEP protein:decreased expression:stomach (human) RGD PMID:24767857 RGD:125097484 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G ATP6V1C1 ATPase H+ transporting V1 subunit C1 IEP RGD PMID:23722107 RGD:14700649 NCBI chr 8:103,021,083...103,073,051
Ensembl chr 8:103,021,063...103,073,051
JBrowse link
G BCL2L10 BCL2 like 10 IEP
ISO
IDA
protein:decreased expression:stomach:
DNA:hypermethylation:stomach:
RGD PMID:21171085 PMID:21171085 PMID:21171085 RGD:14392807, RGD:14392807, RGD:14392807 NCBI chr15:52,109,263...52,112,775
Ensembl chr15:52,109,263...52,112,775
JBrowse link
G BCOR BCL6 corepressor disease_progression IAGP RGD PMID:27313181 RGD:150340706 NCBI chr  X:40,051,246...40,177,390
Ensembl chr  X:40,049,815...40,177,329
JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 ISO protein:increased expression:stomach RGD PMID:12854136 RGD:2293138 NCBI chr17:78,214,253...78,225,635
Ensembl chr17:78,214,186...78,225,636
JBrowse link
G BRCA1 BRCA1 DNA repair associated disease_progression IEP RGD PMID:23569343 RGD:9589059 NCBI chr17:43,044,295...43,125,364
Ensembl chr17:43,044,295...43,170,245
JBrowse link
G CBX7 chromobox 7 IEP mRNA:decreased expression:stomach: RGD PMID:22041561 RGD:9587355 NCBI chr22:39,130,772...39,152,680
Ensembl chr22:39,120,167...39,152,680
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A disease_progression IEP RGD PMID:11745255 RGD:8662389 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 susceptibility IAGP associated with Helicobacter Infections;DNA:SNP:promoter: -251T>A (rs4073) (human) RGD PMID:31522447 RGD:40925938 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,541...73,743,716
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 disease_progression IEP RGD PMID:21709195 RGD:126781768 NCBI chr17:39,688,094...39,728,660
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 disease_progression IEP RGD PMID:21709195 RGD:126781768 NCBI chr12:56,080,108...56,103,505
Ensembl chr12:56,076,799...56,103,505
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 disease_progression IEP RGD PMID:21709195 RGD:126781768 NCBI chr 2:211,375,717...212,538,802
Ensembl chr 2:211,375,717...212,538,841
JBrowse link
G KDM4A lysine demethylase 4A severity IEP mRNA, protein:increased expression:gastric mucosa (human) RGD PMID:24802408 RGD:9587437 NCBI chr 1:43,650,149...43,705,518
Ensembl chr 1:43,650,149...43,705,518
JBrowse link
G KDM4C lysine demethylase 4C severity IEP protein:increased expression:stomach (human) RGD PMID:24418035 RGD:9588260 NCBI chr 9:6,720,863...7,175,648
Ensembl chr 9:6,720,863...7,175,648
JBrowse link
G KDM5A lysine demethylase 5A IEP mRNA:increased expression:stomach (human) RGD PMID:23794145 RGD:9588529 NCBI chr12:280,057...389,320
Ensembl chr12:280,057...389,320
JBrowse link
G KMT2C lysine methyltransferase 2C severity IEP protein:decreased expression:stomach (human) RGD PMID:25222251 RGD:9588234 NCBI chr 7:152,134,925...152,436,642
Ensembl chr 7:152,134,922...152,436,644
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IAGP gastric cancer, OMIM:137215 DNA:point_mutation:CDS:amino acid G12S RGD PMID:7773929 RGD:1600468 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LETMD1 LETM1 domain containing 1 IEP mRNA, protein:increased expression:stomach RGD PMID:12879013 RGD:2314918 NCBI chr12:51,048,220...51,068,958
Ensembl chr12:51,047,962...51,060,424
JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 severity IEP protein:decreased expression:stomach (human) RGD PMID:23569343 RGD:9589059 NCBI chr 6:30,699,807...30,717,988
Ensembl chr 6:30,699,807...30,717,447
JBrowse link
G MMP1 matrix metallopeptidase 1 IEP mRNA:increased expression:gastric mucosa (human) RGD PMID:20944126 RGD:7206857 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO mRNA, protein:increased expression, increased activity:stomach RGD PMID:20434464 RGD:2325777 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO mRNA, protein:increased expression, increased activity:stomach RGD PMID:20434464 RGD:2325777 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease IAGP DNA:deletions:intron:IVS4_delT (human) RGD PMID:15319296 RGD:2317738 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,570...94,493,885
JBrowse link
G MUTYH mutY DNA glycosylase IAGP RGD PMID:15273732 RGD:1600201 NCBI chr 1:45,329,242...45,340,447
Ensembl chr 1:45,329,163...45,340,893
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 susceptibility IAGP DNA:snp:cds:p.V762A rs1136410 (human) RGD PMID:18716896 RGD:5683907 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154
JBrowse link
G SPARC secreted protein acidic and cysteine rich ISO mRNA:increased expression:stomach mucosa RGD PMID:12359048 RGD:2300058 NCBI chr 5:151,661,096...151,686,915
Ensembl chr 5:151,661,096...151,686,975
JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 severity IEP mRNA:decreased expression:stomach (human) RGD PMID:16273651 RGD:1581312 NCBI chr15:40,844,048...40,858,207
Ensembl chr15:40,844,018...40,858,207
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 20299
    disease of anatomical entity 18902
      gastrointestinal system disease 6217
        stomach disease 997
          Stomach Neoplasms 440
            Carney Triad 3
            Gastric Polyposis + 1
            Gastro-Enteropancreatic Neuroendocrine Tumor 18
            stomach cancer + 169
Path 2
Term Annotations click to browse term
  disease 20299
    disease of anatomical entity 18902
      gastrointestinal system disease 6217
        Digestive System Neoplasms 3642
          Gastrointestinal Neoplasms 3517
            Stomach Neoplasms 440
              Carney Triad 3
              Gastric Polyposis + 1
              Gastro-Enteropancreatic Neuroendocrine Tumor 18
              stomach cancer + 169
paths to the root