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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Ventricular Fibrillation
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Accession:DOID:9000184 term browser browse the term
Definition:A potentially lethal cardiac arrhythmia that is characterized by uncoordinated extremely rapid firing of electrical impulses (400-600/min) in HEART VENTRICLES. Such asynchronous ventricular quivering or fibrillation prevents any effective cardiac output and results in unconsciousness (SYNCOPE). It is one of the major electrocardiographic patterns seen with CARDIAC ARREST.
Synonyms:exact_synonym: Ventricular Fibrillations
 related_synonym: Early repolarization associated with ventricular fibrillation
 primary_id: MESH:D014693
 alt_id: MIM:613601
 xref: EFO:0004287


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Ventricular Fibrillation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 ISO RGD PMID:15115899 RGD:1598647 NCBI chrNW_004955413:17,385,966...17,510,220
Ensembl chrNW_004955413:17,382,564...17,510,132
JBrowse link
G Acta1 actin alpha 1, skeletal muscle ISO RGD PMID:16452123 RGD:1598720 NCBI chrNW_004955492:8,644,696...8,647,412
Ensembl chrNW_004955492:8,644,146...8,647,523
JBrowse link
G Actn2 actinin alpha 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:28492532 NCBI chrNW_004955492:3,483,704...3,554,831
Ensembl chrNW_004955492:3,483,511...3,555,190
JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:20334814 RGD:2317910 NCBI chrNW_004955406:39,148,811...39,183,577
Ensembl chrNW_004955406:39,149,689...39,187,688
JBrowse link
G Akap9 A-kinase anchoring protein 9 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:23861362 PMID:25741868 PMID:28074886 PMID:28492532 PMID:28750076 More... NCBI chrNW_004955432:8,933,037...9,090,872
Ensembl chrNW_004955432:8,932,952...9,095,065
JBrowse link
G Ank2 ankyrin 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:11334825 PMID:15178757 PMID:15970537 PMID:16253912 PMID:16650839 More... NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261
JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:20817017 PMID:25527503 PMID:25741868 PMID:28492532 PMID:35470684 More... NCBI chrNW_004955410:3,544,398...3,963,582
Ensembl chrNW_004955410:3,619,740...3,964,239
JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 ISO ClinVar Annotator: match by term: Early repolarization associated with ventricular fibrillation | ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:20817017 PMID:22840528 PMID:23861362 PMID:24033266 PMID:24055113 More... NCBI chrNW_004955429:9,642,725...9,966,175
Ensembl chrNW_004955429:9,644,053...9,966,175
JBrowse link
G Dsg2 desmoglein 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar NCBI chrNW_004955402:18,826,400...18,876,188 JBrowse link
G Dsp desmoplakin ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:25741868 PMID:28492532 PMID:31983221 NCBI chrNW_004955465:6,356,970...6,391,206
Ensembl chrNW_004955465:6,356,863...6,392,207
JBrowse link
G Egfr epidermal growth factor receptor treatment ISO RGD PMID:22028338 RGD:38676260 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Epo erythropoietin ISO CTD Direct Evidence: therapeutic CTD PMID:18156309 NCBI chrNW_004955573:203,875...206,078
Ensembl chrNW_004955573:203,441...206,355
JBrowse link
G F2 coagulation factor II, thrombin ISO associated with Myocardial Infarction;protein:increased expression:plasma: RGD PMID:16649726 RGD:11565086 NCBI chrNW_004955422:1,356,675...1,367,788
Ensembl chrNW_004955422:1,356,769...1,367,517
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B ISO associated with Myocardial Reperfusion Injury RGD PMID:17506935 RGD:2302077 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Gaa alpha glucosidase ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:25741868 PMID:28492532 PMID:29149851 NCBI chrNW_004955506:2,764,959...2,783,231
Ensembl chrNW_004955506:2,764,959...2,783,231
JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:12958158 RGD:1598396 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Ins insulin ISO CTD Direct Evidence: therapeutic CTD PMID:5348156 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10219239 NCBI chrNW_004955407:33,734,969...33,736,609
Ensembl chrNW_004955407:33,735,148...33,735,513
JBrowse link
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:11207363 PMID:12414843 PMID:14504341 PMID:15037716 PMID:15212652 More... NCBI chrNW_004955414:17,166,537...17,200,385
Ensembl chrNW_004955414:17,166,546...17,200,353
JBrowse link
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:25741868 PMID:27920829 PMID:28492532 PMID:30615648 PMID:30975432 More... NCBI chrNW_004955478:2,734,795...2,745,217
Ensembl chrNW_004955478:2,734,795...2,745,217
JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19120683 NCBI chrNW_004955413:17,364,447...17,371,255
Ensembl chrNW_004955413:17,364,213...17,371,255
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:14661677 PMID:15913580 PMID:17210839 PMID:18752142 PMID:19646991 More... NCBI chrNW_004955422:14,212,563...14,544,556
Ensembl chrNW_004955422:14,212,553...14,544,556
JBrowse link
G Nkx2-5 NK2 homeobox 5 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004955408:25,833,649...25,836,673
Ensembl chrNW_004955408:25,832,683...25,836,840
JBrowse link
G Pkp2 plakophilin 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:25351510 PMID:25741868 PMID:28492532 PMID:28600387 PMID:30847666 NCBI chrNW_004955505:2,878,001...2,959,299
Ensembl chrNW_004955505:2,878,081...2,958,404
JBrowse link
G Plau plasminogen activator, urokinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:9083243 NCBI chrNW_004955437:17,995,726...18,000,542
Ensembl chrNW_004955437:17,994,537...18,000,209
JBrowse link
G Ryr2 ryanodine receptor 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:12106942 PMID:12459180 PMID:15544015 PMID:17062961 PMID:19926015 More... NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20062061 NCBI chrNW_004955427:25,157,179...25,244,020
Ensembl chrNW_004955427:25,157,179...25,243,473
JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:22987075 PMID:23861362 PMID:28492532 PMID:28600387 NCBI chrNW_004955468:4,375,517...4,383,383
Ensembl chrNW_004955468:4,375,157...4,383,502
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:10940383 PMID:11827685 PMID:14961552 PMID:15266024 PMID:17141278 More... NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552
JBrowse link
G Snta1 syntrophin alpha 1 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar NCBI chrNW_004955422:27,844,699...27,872,104
Ensembl chrNW_004955422:27,844,853...27,871,547
JBrowse link
G Trpm4 transient receptor potential cation channel subfamily M member 4 ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:21887725 PMID:25741868 PMID:26820365 PMID:28492532 NCBI chrNW_004955559:1,539,036...1,581,800
Ensembl chrNW_004955559:1,546,365...1,581,712
JBrowse link
G Ttn titin ISO ClinVar Annotator: match by term: Ventricular fibrillation ClinVar PMID:23396983 PMID:23861362 PMID:24033266 PMID:25163546 PMID:25741868 More... NCBI chrNW_004955403:18,057,344...18,328,389 JBrowse link
Paroxysmal Ventricular Fibrillation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 ISO ClinVar Annotator: match by term: Paroxysmal familial ventricular fibrillation ClinVar PMID:20817017 PMID:24033266 PMID:25637381 PMID:25741868 PMID:28492532 NCBI chrNW_004955429:9,642,725...9,966,175
Ensembl chrNW_004955429:9,644,053...9,966,175
JBrowse link
G Dpp6 dipeptidyl peptidase like 6 ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:19285295 RGD:5687186 NCBI chrNW_004955491:7,325,720...8,167,949
Ensembl chrNW_004955491:7,326,138...8,168,270
JBrowse link
G Dsp desmoplakin ISO ClinVar Annotator: match by term: Paroxysmal familial ventricular fibrillation ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004955465:6,356,970...6,391,206
Ensembl chrNW_004955465:6,356,863...6,392,207
JBrowse link
G Lmna lamin A/C ISO ClinVar Annotator: match by term: Paroxysmal familial ventricular fibrillation ClinVar PMID:23703017 PMID:25256213 PMID:25481314 PMID:28492532 NCBI chrNW_004955545:2,290,076...2,310,982
Ensembl chrNW_004955545:2,290,037...2,313,033
JBrowse link
G Ryr2 ryanodine receptor 2 ISO ClinVar Annotator: match by term: Paroxysmal familial ventricular fibrillation ClinVar PMID:25741868 PMID:28492532 PMID:34949103 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 ISO ClinVar Annotator: match by term: Paroxysmal familial ventricular fibrillation | ClinVar Annotator: match by term: Paroxysmal ventricular fibrillation ClinVar PMID:16453024 PMID:20110800 PMID:24033266 PMID:25741868 PMID:26467025 More... NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552
JBrowse link
Ventricular Fibrillation, Paroxysmal Familial, 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:15863612 PMID:21685391 PMID:23979604 PMID:24773605 PMID:25691416 More... NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506
JBrowse link
G Dpp6 dipeptidyl peptidase like 6 ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:25741868 NCBI chrNW_004955491:7,325,720...8,167,949
Ensembl chrNW_004955491:7,326,138...8,168,270
JBrowse link
G Dsp desmoplakin ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:28492532 NCBI chrNW_004955465:6,356,970...6,391,206
Ensembl chrNW_004955465:6,356,863...6,392,207
JBrowse link
G Jup junction plakoglobin ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:20864495 PMID:23396983 PMID:24033266 PMID:25351510 PMID:25363768 More... NCBI chrNW_004955451:15,993,055...16,004,152
Ensembl chrNW_004955451:15,989,180...16,004,155
JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004955491:5,391,444...5,422,241
Ensembl chrNW_004955491:5,391,384...5,422,241
JBrowse link
G Pkp2 plakophilin 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004955505:2,878,001...2,959,299
Ensembl chrNW_004955505:2,878,081...2,958,404
JBrowse link
G Rbm20 RNA binding motif protein 20 ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:24033266 PMID:25741868 PMID:28492532 NCBI chrNW_004955485:590,094...769,604
Ensembl chrNW_004955485:586,373...769,635
JBrowse link
G Ryr2 ryanodine receptor 2 ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:24033266 PMID:25741868 PMID:28404607 PMID:28492532 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 OMIM
ClinVar
PMID:235469 PMID:291807 PMID:461398 PMID:1309946 PMID:2107088 More... NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552
JBrowse link
G Snta1 syntrophin alpha 1 ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar PMID:28492532 NCBI chrNW_004955422:27,844,699...27,872,104
Ensembl chrNW_004955422:27,844,853...27,871,547
JBrowse link
G Vcl vinculin ISO ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, type 1 ClinVar NCBI chrNW_004955437:17,812,998...17,920,253
Ensembl chrNW_004955437:17,813,007...17,920,253
JBrowse link
Ventricular Fibrillation, Paroxysmal Familial, 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpp6 dipeptidyl peptidase like 6 ISO ClinVar Annotator: match by term: DPP6-related condition | ClinVar Annotator: match by term: Ventricular fibrillation, paroxysmal familial, 2 OMIM
ClinVar
PMID:19285295 PMID:25741868 NCBI chrNW_004955491:7,325,720...8,167,949
Ensembl chrNW_004955491:7,326,138...8,168,270
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14337
    Pathological Conditions, Signs and Symptoms 11318
      Pathologic Processes 7187
        Cardiac Arrhythmias 737
          Ventricular Fibrillation 39
            Paroxysmal Ventricular Fibrillation + 13
Path 2
Term Annotations click to browse term
  disease 14337
    disease of anatomical entity 14030
      respiratory system disease 4551
        thoracic disease 3522
          heart disease 2999
            Cardiac Arrhythmias 737
              Ventricular Fibrillation 39
                Paroxysmal Ventricular Fibrillation + 13
paths to the root