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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Spinal Cord Injuries
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Accession:DOID:9000039 term browser browse the term
Definition:Penetrating and non-penetrating injuries to the spinal cord resulting from traumatic external forces (e.g., WOUNDS, GUNSHOT; WHIPLASH INJURIES; etc.).
Synonyms:exact_synonym: Post Traumatic Myelopathy;   Post-Traumatic Myelopathies;   Spinal Cord Contusion;   Spinal Cord Contusions;   Spinal Cord Injury;   Spinal Cord Laceration;   Spinal Cord Lacerations;   Spinal Cord Transection;   Spinal Cord Transections;   Spinal Cord Trauma;   Spinal Cord Traumas;   Traumatic Myelopathies;   Traumatic Myelopathy
 narrow_synonym: acute spinal cord injury
 primary_id: MESH:D013119;   RDO:0006597
 xref: EFO:1001919



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Spinal Cord Injuries term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP-binding cassette, sub-family C member 8 treatment ISO
IMP
mRNA:increased expression:spinal cord RGD PMID:20410530 PMID:25763638 PMID:20410530 PMID:20410530 RGD:12790978, RGD:12791993, RGD:12790978, RGD:12790978 NCBI chr 7:45,753,952...45,829,441
Ensembl chr 7:45,753,947...45,829,457
JBrowse link
G Acan aggrecan ISO protein:altered expression:spinal cord (rat) RGD PMID:14769391 RGD:2315837 NCBI chr 7:78,702,974...78,764,847
Ensembl chr 7:78,703,231...78,764,847
JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 ISO RGD PMID:20456005 RGD:10755338 NCBI chr10:77,126,561...77,254,125
Ensembl chr10:77,126,560...77,254,104
JBrowse link
G Adcy3 adenylate cyclase 3 treatment ISO RGD PMID:24970286 RGD:407550181 NCBI chr12:4,183,397...4,263,525
Ensembl chr12:4,183,103...4,263,525
JBrowse link
G Adcyap1 adenylate cyclase activating polypeptide 1 ISO protein:altered expression:spinal cord,dorsal root ganglion, urinary bladder RGD PMID:15698618 PMID:15913892 RGD:2325309, RGD:2325306 NCBI chr17:93,506,448...93,513,967
Ensembl chr17:93,506,445...93,513,965
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO protein:increased expression:serum RGD PMID:16213239 RGD:5686719 NCBI chr16:22,965,286...22,976,718
Ensembl chr16:22,965,286...22,976,778
JBrowse link
G Adora1 adenosine A1 receptor ISO protein:decreased expression:spinal cord RGD PMID:18289533 PMID:17853654 RGD:5129096, RGD:4890369 NCBI chr 1:134,126,953...134,163,195
Ensembl chr 1:134,126,963...134,163,169
JBrowse link
G Adora2a adenosine A2a receptor ISO RGD PMID:17559837 RGD:4890378 NCBI chr10:75,152,711...75,170,626
Ensembl chr10:75,152,711...75,170,618
JBrowse link
G Adra1a adrenergic receptor, alpha 1a ISO mRNA:increased expression:aorta RGD PMID:16524515 RGD:5688371 NCBI chr14:66,872,705...67,009,549
Ensembl chr14:66,872,700...67,008,617
JBrowse link
G Ager advanced glycosylation end product-specific receptor ISO protein:increased expression:spinal cord (rat) RGD PMID:20195207 RGD:2325645 NCBI chr17:34,816,545...34,819,911
Ensembl chr17:34,816,836...34,819,910
JBrowse link
G Aif1 allograft inflammatory factor 1 ISO protein:altered expression:spinal cord dorsal horn (rat) RGD PMID:17158026 RGD:2313037 NCBI chr17:35,389,967...35,394,977
Ensembl chr17:35,389,967...35,395,044
JBrowse link
G Akt1 thymoma viral proto-oncogene 1 ISO RGD PMID:20678995 RGD:10040962 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318
JBrowse link
G Akt1s1 AKT1 substrate 1 ISO CTD Direct Evidence: therapeutic CTD PMID:17457363 NCBI chr 7:44,498,648...44,504,845
Ensembl chr 7:44,498,415...44,504,845
JBrowse link
G Ambra1 autophagy/beclin 1 regulator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr 2:91,560,464...91,749,194
Ensembl chr 2:91,560,479...91,749,194
JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO mRNA:increased expression:spinal cord, dorsal root ganglion, neuron RGD PMID:17610582 RGD:5133279 NCBI chr19:36,089,365...36,097,244
Ensembl chr19:36,089,361...36,097,499
JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B ISO RGD PMID:25034417 RGD:10401137 NCBI chr 4:46,450,926...46,472,657
Ensembl chr 4:46,450,902...46,472,657
JBrowse link
G Anxa1 annexin A1 treatment ISO mRNA,protein:increased expression:neuron,glial cell RGD PMID:17917587 PMID:15248295 RGD:2306891, RGD:10053688 NCBI chr19:20,350,798...20,368,035
Ensembl chr19:20,350,792...20,368,308
JBrowse link
G Anxa2 annexin A2 ISO mRNA,protein:increased expression:neuron,glial cell RGD PMID:15248295 RGD:10053688 NCBI chr 9:69,360,978...69,399,074
Ensembl chr 9:69,360,902...69,399,077
JBrowse link
G Anxa5 annexin A5 ISO mRNA,protein:increased expression:neuron,glial cell RGD PMID:15248295 RGD:10053688 NCBI chr 3:36,503,072...36,530,036
Ensembl chr 3:36,503,072...36,530,043
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO RGD PMID:21748659 RGD:10053608 NCBI chr10:90,825,173...90,918,688
Ensembl chr10:90,825,173...90,918,632
JBrowse link
G Apex1 apurinic/apyrimidinic endonuclease 1 ISO mRNA:increased expression:spinal cord RGD PMID:18637713 RGD:2315670 NCBI chr14:51,162,406...51,164,645
Ensembl chr14:51,162,425...51,164,596
JBrowse link
G Apoe apolipoprotein E ISO DNA:polymorphism:exon: RGD PMID:18581664 PMID:30036659 RGD:7771551, RGD:13703128 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Aqp1 aquaporin 1 ISO protein:increased expression:spinal cord, neuron, astrocyte
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:21092735 PMID:18248364 PMID:21092735 RGD:2307072, RGD:5148013 NCBI chr 6:55,313,284...55,325,540
Ensembl chr 6:55,313,417...55,325,540
JBrowse link
G Aqp4 aquaporin 4 ISO
IMP
IEP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:21092735 PMID:21092735 PMID:20517941 PMID:21280976 RGD:5148013, RGD:5148027, RGD:5148035 NCBI chr18:15,522,451...15,544,039
Ensembl chr18:15,522,553...15,544,039
JBrowse link
G Atf4 activating transcription factor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742
JBrowse link
G Atg5 autophagy related 5 ISO protein:increased expression:axon
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:29793971 PMID:25040536 RGD:11553820 NCBI chr10:44,144,325...44,240,295
Ensembl chr10:44,144,354...44,240,287
JBrowse link
G Atg7 autophagy related 7 ISO protein:increased expression:axon RGD PMID:25040536 RGD:11553820 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575
JBrowse link
G Atm ataxia telangiectasia mutated ISO protein:increased expression:spinal cord RGD PMID:21748659 RGD:10053608 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
JBrowse link
G Atp2a1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 ISO protein:decreased expression:tail, skeletal muscle RGD PMID:21930674 RGD:13782071 NCBI chr 7:126,045,032...126,062,245
Ensembl chr 7:126,045,030...126,062,280
JBrowse link
G Atp2a2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 ISO protein:decreased expression:tail, skeletal muscle RGD PMID:21930674 RGD:13782071 NCBI chr 5:122,591,576...122,640,288
Ensembl chr 5:122,591,576...122,640,288
JBrowse link
G Bambi BMP and activin membrane-bound inhibitor ISO mRNA,protein:decreased expression:spinal cord: RGD PMID:28035406 RGD:14390163 NCBI chr18:3,507,011...3,516,404
Ensembl chr18:3,507,923...3,516,404
JBrowse link
G Bax BCL2-associated X protein treatment ISO RGD PMID:27256506 RGD:13792677 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322
JBrowse link
G Bcan brevican treatment ISO RGD PMID:15016081 RGD:9589823 NCBI chr 3:87,894,839...87,908,458
Ensembl chr 3:87,894,838...87,907,537
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 treatment ISO RGD PMID:27256506 RGD:13792677 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004
JBrowse link
G Bdnf brain derived neurotrophic factor treatment ISO
IEP
RGD PMID:16022868 PMID:19203225 PMID:24551172 PMID:22490786 RGD:4891112, RGD:4891066, RGD:10059354, RGD:405850245 NCBI chr 2:109,505,045...109,557,388
Ensembl chr 2:109,505,045...109,557,352
JBrowse link
G Becn1 beclin 1, autophagy related treatment IEP
ISO
protein:increased expression:spinal cord
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:29793971 PMID:21806471 PMID:23852559 PMID:24559459 RGD:6483100, RGD:11561922, RGD:11561918 NCBI chr11:101,179,084...101,193,112
Ensembl chr11:101,176,778...101,193,112
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO RGD PMID:23770801 RGD:9068404 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805
JBrowse link
G Bmp4 bone morphogenetic protein 4 treatment ISO RGD PMID:23770801 PMID:18803859 RGD:9068404, RGD:9068437 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
JBrowse link
G Bnip3 BCL2/adenovirus E1B interacting protein 3 ISO protein:increased expression:spinal cord RGD PMID:23637053 RGD:11564330 NCBI chr 7:138,492,565...138,511,235
Ensembl chr 7:138,492,565...138,511,248
JBrowse link
G Bnip3l BCL2/adenovirus E1B interacting protein 3-like ISO protein:increased expression:spinal cord RGD PMID:23637053 RGD:11564330 NCBI chr14:67,222,688...67,246,580
Ensembl chr14:67,222,688...67,246,326
JBrowse link
G Brca2 breast cancer 2, early onset ISO mRNA,protein:increased expression:spinal cord: RGD PMID:21748659 RGD:10053608 NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794
JBrowse link
G C1qb complement component 1, q subcomponent, beta polypeptide ISO mRNA:increased expression RGD PMID:16345062 RGD:1599510 NCBI chr 4:136,607,437...136,613,511
Ensembl chr 4:136,607,440...136,613,498
JBrowse link
G Capn1 calpain 1 treatment ISO RGD PMID:23102374 RGD:13792496 NCBI chr19:6,038,573...6,065,855
Ensembl chr19:6,038,573...6,065,927
JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta ISO protein:decreased expression:spinal cord RGD PMID:20141154 RGD:9685028 NCBI chr 4:138,920,210...139,019,131
Ensembl chr 4:138,920,210...139,019,129
JBrowse link
G Casp1 caspase 1 ISO protein:increased expression, increased activation:spinal cord RGD PMID:18367607 RGD:2315889 NCBI chr 9:5,298,517...5,307,281
Ensembl chr 9:5,298,508...5,307,290
JBrowse link
G Casp12 caspase 12 treatment ISO associated with Diabetes Mellitus, Experimental RGD PMID:19215662 PMID:26884858 RGD:2311450, RGD:11560925 NCBI chr 9:5,345,419...5,373,034
Ensembl chr 9:5,345,430...5,373,032
JBrowse link
G Casp3 caspase 3 treatment ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:14588118 PMID:18378144 PMID:21748659 PMID:27339639 PMID:27256506 RGD:2293322, RGD:10053608, RGD:13782345, RGD:13792677 NCBI chr 8:47,070,326...47,092,733
Ensembl chr 8:47,070,326...47,092,724
JBrowse link
G Casp9 caspase 9 treatment ISO RGD PMID:21748659 PMID:27339639 RGD:10053608, RGD:13782345 NCBI chr 4:141,520,923...141,543,289
Ensembl chr 4:141,520,923...141,543,287
JBrowse link
G Cav1 caveolin 1, caveolae protein ISO protein:increased phosphorylation:spinal cord RGD PMID:17275798 RGD:2289124 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451
JBrowse link
G Ccl12 C-C motif chemokine ligand 12 ISO mRNA:increased expression:spinal cord RGD PMID:9698165 RGD:5135274 NCBI chr11:81,992,671...81,994,225
Ensembl chr11:81,992,671...81,994,226
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP mRNA:increased expression:spinal cord segment (mouse) RGD PMID:20478301 RGD:4889905 NCBI chr11:83,416,604...83,421,344
Ensembl chr11:83,416,604...83,421,344
JBrowse link
G Ccnd3 cyclin D3 ISO protein:increased expression:spinal cord RGD PMID:18008145 RGD:2316019 NCBI chr17:47,815,976...47,910,614
Ensembl chr17:47,815,976...47,910,616
JBrowse link
G Ccne1 cyclin E1 ISO protein:increased expression:spinal cord RGD PMID:16759516 RGD:2289281 NCBI chr 7:37,797,409...37,806,915
Ensembl chr 7:37,797,409...37,806,959
JBrowse link
G Ccnh cyclin H ISO mRNA, protein:increased expression:spinal cord RGD PMID:21710280 RGD:9590263 NCBI chr13:85,337,504...85,361,850
Ensembl chr13:85,337,527...85,371,588
JBrowse link
G Ccr1 C-C motif chemokine receptor 1 ISO RGD PMID:21332278 RGD:5688138 NCBI chr 9:123,762,163...123,768,729
Ensembl chr 9:123,762,161...123,768,729
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 ISO protein:increased expression:spinal cord RGD PMID:18338959 RGD:4144888 NCBI chr 9:123,901,954...123,913,594
Ensembl chr 9:123,901,987...123,913,594
JBrowse link
G Cd274 CD274 antigen ISO mRNA:increased expression:microglial cell RGD PMID:29665726 RGD:40886268 NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495
JBrowse link
G Cdc42 cell division cycle 42 ISO mRNA:increased expression:spinal cord RGD PMID:15736231 RGD:5688276 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031
JBrowse link
G Cdk1 cyclin dependent kinase 1 ISO protein:increased expression:spinal cord dura mater (rat) RGD PMID:19672039 RGD:2316488 NCBI chr10:69,170,976...69,188,742
Ensembl chr10:69,170,976...69,188,768
JBrowse link
G Cdk19 cyclin dependent kinase 19 ISO mRNA, protein:increased expression:spinal cord RGD PMID:18008145 RGD:2316019 NCBI chr10:40,225,283...40,359,814
Ensembl chr10:40,215,560...40,359,814
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO protein:decreased expression, altered localization:spinal cord, neuron, microglial cell RGD PMID:18319192 RGD:2293615 NCBI chr 6:134,897,364...134,902,488
Ensembl chr 6:134,897,364...134,902,476
JBrowse link
G Chl1 cell adhesion molecule L1-like ISO protein:increased expression:spinal cord (rat) RGD PMID:21337374 RGD:6483045 NCBI chr 6:103,487,372...103,709,999
Ensembl chr 6:103,487,547...103,727,172
JBrowse link
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:18930143 RGD:2316199 NCBI chr 4:33,923,171...33,948,831
Ensembl chr 4:33,924,593...33,948,831
JBrowse link
G Cnr2 cannabinoid receptor 2 ISO RGD PMID:18930143 RGD:2316199 NCBI chr 4:135,622,500...135,647,530
Ensembl chr 4:135,622,705...135,647,518
JBrowse link
G Cr2 complement receptor 2 ISO protein:increased expression:cerebrospinal fluid RGD PMID:26502875 RGD:11343913 NCBI chr 1:194,819,120...194,859,096
Ensembl chr 1:194,819,119...194,859,024
JBrowse link
G Crh corticotropin releasing hormone ISO protein:altered expression:spinal cord (rat) RGD PMID:20458328 RGD:5490964 NCBI chr 3:19,747,565...19,749,560
Ensembl chr 3:19,747,565...19,749,560
JBrowse link
G Crp C-reactive protein, pentraxin-related ISO RGD PMID:22404382 RGD:6903321 NCBI chr 1:172,525,623...172,527,533
Ensembl chr 1:172,525,622...172,660,598
JBrowse link
G Csf2 colony stimulating factor 2 (granulocyte-macrophage) treatment ISO RGD PMID:15658127 RGD:10449531 NCBI chr11:54,138,096...54,140,725
Ensembl chr11:54,138,097...54,140,493
JBrowse link
G Csf3 colony stimulating factor 3 (granulocyte) treatment ISO RGD PMID:21953623 RGD:10450511 NCBI chr11:98,591,287...98,594,457
Ensembl chr11:98,592,089...98,594,455
JBrowse link
G Cspg4 chondroitin sulfate proteoglycan 4 IDA
ISO
RGD PMID:22243800 PMID:19604403 PMID:22042562 RGD:5686844, RGD:5686859, RGD:5686848 NCBI chr 9:56,772,388...56,807,154
Ensembl chr 9:56,772,317...56,807,154
JBrowse link
G Ctss cathepsin S ISO RGD PMID:16344894 RGD:2303423 NCBI chr 3:95,434,097...95,463,716
Ensembl chr 3:95,434,097...95,463,714
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 ISO RGD PMID:9698165 RGD:5135274 NCBI chr 5:91,039,104...91,040,980
Ensembl chr 5:91,039,100...91,040,974
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO RGD PMID:19170890 RGD:2311365 NCBI chr 5:92,494,497...92,496,748
Ensembl chr 5:92,494,497...92,496,748
JBrowse link
G Cyba cytochrome b-245, alpha polypeptide ISO mRNA:increased expression:spinal cord RGD PMID:16345062 RGD:1599510 NCBI chr 8:123,151,510...123,159,679
Ensembl chr 8:123,151,515...123,159,669
JBrowse link
G Cybb cytochrome b-245, beta polypeptide IEP mRNA,protein:increased expression:microglia: RGD PMID:20679217 RGD:11040629 NCBI chr  X:9,301,493...9,354,005
Ensembl chr  X:9,301,491...9,354,010
JBrowse link
G Dab2 disabled 2, mitogen-responsive phosphoprotein ISO protein:increased expression:spinal cord RGD PMID:17317100 RGD:7243246 NCBI chr15:6,329,269...6,470,196
Ensembl chr15:6,329,269...6,470,193
JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:16998900 RGD:2314373 NCBI chr18:71,386,703...72,484,299
Ensembl chr18:71,386,705...72,484,140
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr10:127,126,662...127,132,160
Ensembl chr10:127,126,643...127,132,157
Ensembl chr10:127,126,643...127,132,157
JBrowse link
G Dusp1 dual specificity phosphatase 1 treatment ISO protein:decreased expression:spinal cord RGD PMID:18630599 PMID:19383246 RGD:7771572, RGD:7771580 NCBI chr17:26,724,565...26,727,446
Ensembl chr17:26,724,564...26,781,102
JBrowse link
G Efnb2 ephrin B2 ISO mRNA,protein:increased expression:fibroblast, astrocyte
protein:increased phosporylation:spinal cord
RGD PMID:33794069 PMID:12944508 RGD:127285659, RGD:127285804 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242
JBrowse link
G Egfr epidermal growth factor receptor ISO protein:increased phosphorylation:spinal cord, astrocyte (rat) RGD PMID:20869112 PMID:21402118 RGD:5131525, RGD:5131454 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Eif5a eukaryotic translation initiation factor 5A ISO mRNA, protein:increased expression:gastrocnemius RGD PMID:23238062 RGD:10395360 NCBI chr11:69,807,538...69,812,784
Ensembl chr11:69,807,540...69,812,784
JBrowse link
G Endog endonuclease G ISO RGD PMID:16689664 RGD:8655990 NCBI chr 2:30,061,525...30,064,057
Ensembl chr 2:30,061,505...30,064,081
JBrowse link
G Eno2 enolase 2, gamma neuronal ISO protein:increased expression:serum, cerebrospinal fluid RGD PMID:18343116 RGD:2293743 NCBI chr 6:124,737,018...124,746,489
Ensembl chr 6:124,737,016...124,746,636
JBrowse link
G Ensa endosulfine alpha ISO mRNA:decreased expression:spinal cord RGD PMID:16344894 RGD:2303423 NCBI chr 3:95,532,291...95,539,428
Ensembl chr 3:95,532,304...95,539,413
JBrowse link
G Epha3 Eph receptor A3 ISO RGD PMID:16083359 RGD:2301766 NCBI chr16:63,363,895...63,684,538
Ensembl chr16:63,363,897...63,684,538
JBrowse link
G Epha4 Eph receptor A4 ISO
IMP
RGD PMID:17970742 PMID:17418490 PMID:21931787 RGD:5688750, RGD:5688782, RGD:5688764 NCBI chr 1:77,343,819...77,491,763
Ensembl chr 1:77,343,822...77,491,725
JBrowse link
G Epha7 Eph receptor A7 ISO mRNA:increased expression:spinal cord RGD PMID:16983667 RGD:2301957 NCBI chr 4:28,811,840...28,969,391
Ensembl chr 4:28,813,131...28,967,499
JBrowse link
G Ephb2 Eph receptor B2 ameliorates ISO RGD PMID:33794069 PMID:12944508 RGD:127285659, RGD:127285804 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299
JBrowse link
G Epo erythropoietin treatment ISO RGD PMID:22196867 RGD:10401074 NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO mRNA, protein:increased expression:spinal cord RGD PMID:11797086 RGD:2289967 NCBI chr10:128,403,392...128,425,504
Ensembl chr10:128,403,392...128,425,521
JBrowse link
G Esr1 estrogen receptor 1 (alpha) ISO RGD PMID:25105782 RGD:10045844 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614
JBrowse link
G Esr2 estrogen receptor 2 (beta) ISO RGD PMID:25105782 RGD:10045844 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033
JBrowse link
G F2 coagulation factor II ISO RGD PMID:16344894 RGD:2303423 NCBI chr 2:91,442,742...91,466,799
Ensembl chr 2:91,455,665...91,466,759
JBrowse link
G Fadd Fas associated via death domain treatment ISO RGD PMID:23574812 RGD:11344882 NCBI chr 7:144,132,060...144,136,178
Ensembl chr 7:144,131,055...144,136,200
JBrowse link
G Fas Fas cell surface death receptor ISO protein:increased expression:cervical spinal cord RGD PMID:17703359 PMID:29738767 PMID:17518537 RGD:2290176, RGD:13792580, RGD:2290177 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fgf1 fibroblast growth factor 1 ISO Human FGF1 used in rat model of spinal cord injury RGD PMID:21663406 PMID:18482974 PMID:20488178 PMID:8662542 RGD:5509875, RGD:2317692, RGD:5509877, RGD:5509876 NCBI chr18:38,971,725...39,062,532
Ensembl chr18:38,971,726...39,062,525
JBrowse link
G Fgf2 fibroblast growth factor 2 treatment ISO RGD PMID:24968269 RGD:40924652 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257
JBrowse link
G Fis1 fission, mitochondrial 1 treatment ISO RGD PMID:26079325 RGD:12437066 NCBI chr 5:136,982,129...136,995,088
Ensembl chr 5:136,982,129...136,995,088
JBrowse link
G Fkbp1b FK506 binding protein 1b ISO RGD PMID:27998200 RGD:329853757 NCBI chr12:4,883,174...4,891,736
Ensembl chr12:4,883,174...4,891,591
JBrowse link
G Flt1 FMS-like tyrosine kinase 1 ISO mRNA:increased expression:spinal cord, astrocyte, macrophage RGD PMID:17409380 RGD:5684414 NCBI chr 5:147,498,414...147,663,419
Ensembl chr 5:147,498,414...147,662,821
JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:20347014 RGD:7205459 NCBI chr 1:71,624,632...71,692,439
Ensembl chr 1:71,624,679...71,692,359
JBrowse link
G Foxo3 forkhead box O3 ISO protein:decreased expression:spinal cord,neuron, astrocyte: RGD PMID:22930444 RGD:10402202 NCBI chr10:42,057,841...42,152,691
Ensembl chr10:42,057,837...42,152,751
JBrowse link
G Foxp3 forkhead box P3 treatment ISO RGD PMID:30287503 RGD:38549580 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484
JBrowse link
G Gap43 growth associated protein 43 treatment ISO RGD PMID:24968269 RGD:40924652 NCBI chr16:42,068,915...42,161,014
Ensembl chr16:42,068,805...42,161,014
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase treatment ISO RGD PMID:27256506 RGD:13792677 NCBI chr 6:125,138,812...125,143,450
Ensembl chr 6:125,138,678...125,143,430
JBrowse link
G Gdnf glial cell line derived neurotrophic factor treatment IDA
ISO
IEP
RGD PMID:22342994 PMID:28296347 PMID:36914965 PMID:26415641 PMID:22490786 RGD:5688774, RGD:405878060, RGD:405878056, RGD:13208513, RGD:405850245 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056
JBrowse link
G Gfap glial fibrillary acidic protein treatment IMP
ISO
protein:increased expression:spinal cord RGD PMID:10225952 PMID:24968269 PMID:21250919 RGD:6480471, RGD:40924652, RGD:6480511 NCBI chr11:102,778,162...102,791,368
Ensembl chr11:102,778,162...102,791,738
JBrowse link
G Ghsr growth hormone secretagogue receptor ISO RGD PMID:25261791 RGD:12907564 NCBI chr 3:27,425,500...27,433,384
Ensembl chr 3:27,425,500...27,432,159
JBrowse link
G Gja1 gap junction protein, alpha 1 treatment ISO RGD PMID:23403365 PMID:24183749 RGD:8662431, RGD:8662460 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609
JBrowse link
G Gjc2 gap junction protein, gamma 2 treatment ISO RGD PMID:26415641 RGD:13208513 NCBI chr11:59,066,390...59,074,039
Ensembl chr11:59,066,394...59,074,039
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial ISO protein:increased expression:spinal cord (rat) RGD PMID:27150525 RGD:13506243 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 ISO RGD PMID:22975889 RGD:8552988 NCBI chr 5:139,408,905...139,413,555
Ensembl chr 5:139,408,906...139,413,555
JBrowse link
G Gpx3 glutathione peroxidase 3 ISO protein:increased expression:cerebrospinal fluid RGD PMID:21559420 RGD:40907059 NCBI chr11:54,793,680...54,801,213
Ensembl chr11:54,793,279...54,801,203
JBrowse link
G Grk6 G protein-coupled receptor kinase 6 ISO protein:increased expression:spinal cord, neuron, microglial cell (rat) RGD PMID:23359120 RGD:13792782 NCBI chr13:55,592,865...55,608,740
Ensembl chr13:55,592,885...55,608,740
JBrowse link
G Grn granulin IEP mRNA, protein:increased expression:spinal cord: RGD PMID:19946692 RGD:5509603 NCBI chr11:102,321,333...102,327,635
Ensembl chr11:102,321,141...102,327,874
JBrowse link
G Gsta4 glutathione S-transferase, alpha 4 ISO mRNA:increased expression:lumbar segment of spinal cord (rat) RGD PMID:22160604 RGD:5687769 NCBI chr 9:78,099,248...78,116,631
Ensembl chr 9:78,090,056...78,116,631
JBrowse link
G Hgf hepatocyte growth factor treatment ISO mRNA,protein:increased expression:spinal cord: RGD PMID:22140459 PMID:17549731 PMID:17549731 RGD:8548666, RGD:2317487, RGD:2317487 NCBI chr 5:16,758,493...16,827,448
Ensembl chr 5:16,758,493...16,825,150
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit ISO protein:increased expression:spinal cord
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:21092735 PMID:21092735 RGD:5148013 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304
JBrowse link
G Hmgb1 high mobility group box 1 ISO mRNA:increased expression:spinal cord RGD PMID:20195207 RGD:2325645 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299
JBrowse link
G Hmox1 heme oxygenase 1 treatment ISO RGD PMID:23943397 RGD:10766443 NCBI chr 8:75,820,246...75,827,221
Ensembl chr 8:75,820,249...75,827,217
JBrowse link
G Hrh3 histamine receptor H3 ISO RGD PMID:16671478 RGD:1626425 NCBI chr 2:179,741,258...179,746,264
Ensembl chr 2:179,741,258...179,746,281
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 ISO protein:decreased expression:spinal cord (rat) RGD PMID:24499940 RGD:10445836 NCBI chr17:45,878,704...45,884,187
Ensembl chr17:45,878,701...45,884,197
JBrowse link
G Hspa5 heat shock protein 5 IEP mRNA: increased expression RGD PMID:21933012 RGD:5685666 NCBI chr 2:34,662,102...34,666,541
Ensembl chr 2:34,661,982...34,667,559
JBrowse link
G Hspb1 heat shock protein 1 treatment ISO mRNA,protein:increased expression:spinal cord: RGD PMID:12098653 PMID:30287503 RGD:10402749, RGD:38549580 NCBI chr 5:135,916,773...135,918,417
Ensembl chr 5:135,916,773...135,918,417
JBrowse link
G Icam1 intercellular adhesion molecule 1 treatment ISO RGD PMID:8627308 RGD:11522712 NCBI chr 9:20,927,236...20,940,110
Ensembl chr 9:20,927,281...20,940,113
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO mRNA:increased expression:spinal cord (rat) RGD PMID:11746449 RGD:9686138 NCBI chr 2:152,578,171...152,579,330
Ensembl chr 2:152,578,171...152,579,330
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO mRNA:increased expression:spinal cord (rat) RGD PMID:11746449 RGD:9686138 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139
JBrowse link
G Id3 inhibitor of DNA binding 3 ISO mRNA:increased expression:spinal cord (rat) RGD PMID:11746449 RGD:9686138 NCBI chr 4:135,871,133...135,872,703
Ensembl chr 4:135,870,808...135,873,066
JBrowse link
G Ifnb1 interferon beta 1, fibroblast ameliorates ISO RGD PMID:17426631 PMID:20109445 RGD:401854235, RGD:401854241 NCBI chr 4:88,440,253...88,441,083
Ensembl chr 4:88,440,262...88,441,011
JBrowse link
G Il10 interleukin 10 treatment ISO RGD PMID:29691718 RGD:14975124 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711
JBrowse link
G Il18 interleukin 18 treatment ISO RGD PMID:18367607 PMID:23140983 RGD:2315889, RGD:8655974 NCBI chr 9:50,466,000...50,493,141
Ensembl chr 9:50,466,127...50,493,140
JBrowse link
G Il1b interleukin 1 beta treatment ISO mRNA, protein:increased expression:spinal cord RGD PMID:16038625 PMID:29691718 PMID:23209732 RGD:1626673, RGD:14975124, RGD:7175523 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059
JBrowse link
G Il1r1 interleukin 1 receptor, type I ISO mRNA,protein:increased expression:spinal cord RGD PMID:16456668 RGD:7207035 NCBI chr 1:40,261,651...40,355,361
Ensembl chr 1:40,264,240...40,356,417
JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO protein:increased expression:serum (human) RGD PMID:16038625 PMID:17964877 RGD:1626673, RGD:6907102 NCBI chr 2:24,226,872...24,241,503
Ensembl chr 2:24,226,865...24,241,506
JBrowse link
G Il4 interleukin 4 ISO RGD PMID:20623539 RGD:5128562 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496
JBrowse link
G Il4ra interleukin 4 receptor, alpha ISO mRNA:increased expression:spinal cord RGD PMID:20623539 RGD:5128562 NCBI chr 7:125,151,443...125,178,646
Ensembl chr 7:125,151,292...125,178,646
JBrowse link
G Il6 interleukin 6 treatment ISO RGD PMID:27085942 PMID:29691718 RGD:11062150, RGD:14975124 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979
JBrowse link
G Irf1 interferon regulatory factor 1 ISO RGD PMID:11723173 RGD:2298928 NCBI chr11:53,660,841...53,669,200
Ensembl chr11:53,660,841...53,669,200
JBrowse link
G Irf5 interferon regulatory factor 5 treatment ISO RGD PMID:24968269 RGD:40924652 NCBI chr 6:29,526,129...29,541,874
Ensembl chr 6:29,526,624...29,541,870
JBrowse link
G Itih4 inter alpha-trypsin inhibitor, heavy chain 4 severity ISO protein:decreased expression:cerebrospinal fluid RGD PMID:21559420 RGD:40907059 NCBI chr14:30,608,433...30,623,943
Ensembl chr14:30,608,433...30,624,310
JBrowse link
G Jak2 Janus kinase 2 treatment ISO RGD PMID:23274522 RGD:10411896 NCBI chr19:29,229,006...29,290,495
Ensembl chr19:29,229,228...29,290,480
JBrowse link
G Jun jun proto-oncogene ISO protein:increased phosphorylation:neuron RGD PMID:21132399 RGD:4889994 NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 ISO protein:decreased expression:spinal cord RGD PMID:20375134 RGD:8662905 NCBI chr 1:172,168,777...172,201,652
Ensembl chr 1:172,168,777...172,201,652
JBrowse link
G Kcnk2 potassium channel, subfamily K, member 2 treatment ISO RGD PMID:22425721 RGD:9831183 NCBI chr 1:188,940,127...189,134,951
Ensembl chr 1:188,940,127...189,134,470
JBrowse link
G Kcnn4 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 IMP RGD PMID:24606313 RGD:329955563 NCBI chr 7:24,069,750...24,084,635
Ensembl chr 7:24,069,688...24,086,115
JBrowse link
G Kdm6b KDM1 lysine (K)-specific demethylase 6B ISO mRNA:increased expression:spinal cord (rat) RGD PMID:22578249 RGD:9587821 NCBI chr11:69,289,334...69,311,188
Ensembl chr11:69,289,334...69,304,501
JBrowse link
G Kdr kinase insert domain protein receptor ISO mRNA:increased expression:spinal cord, astrocyte, macrophage RGD PMID:17409380 RGD:5684414 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118
JBrowse link
G Kif3b kinesin family member 3B ISO protein:increased expression:spinal cord RGD PMID:23093447 RGD:11049594 NCBI chr 2:153,132,028...153,175,310
Ensembl chr 2:153,133,333...153,175,310
JBrowse link
G Klk6 kallikrein related-peptidase 6 ISO protein:increased expression:spinal cord RGD PMID:16987227 RGD:2314866 NCBI chr 7:43,473,967...43,481,219
Ensembl chr 7:43,473,923...43,481,454
JBrowse link
G Kmo kynurenine 3-monooxygenase ISO mRNA,protein:increased expression:spinal cord: RGD PMID:26524415 RGD:13703043 NCBI chr 1:175,459,759...175,488,419
Ensembl chr 1:175,447,947...175,489,682
JBrowse link
G Lep leptin ISO RGD PMID:19777863 RGD:5128780 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 treatment ISO RGD PMID:23867460 RGD:13800520 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 treatment ISO RGD PMID:24090150 RGD:12798566 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564
JBrowse link
G Lum lumican ISO protein:increased expression:spinal cord RGD PMID:18482974 RGD:2317692 NCBI chr10:97,401,363...97,408,565
Ensembl chr10:97,400,990...97,408,565
JBrowse link
G Map1b microtubule-associated protein 1B ISO protein:increased phosphorylation:spinal cord, neuron RGD PMID:17880387 RGD:2304007 NCBI chr13:99,557,972...99,653,110
Ensembl chr13:99,557,954...99,653,048
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha treatment ISO protein:increased expression:spinal cord RGD PMID:24559459 PMID:23637053 PMID:23852559 RGD:11561918, RGD:11564330, RGD:11561922 NCBI chr 2:155,118,284...155,119,993
Ensembl chr 2:155,118,217...155,119,993
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr 8:122,317,177...122,325,499
Ensembl chr 8:122,317,100...122,325,499
JBrowse link
G Map2 microtubule-associated protein 2 ISO RGD PMID:21704982 RGD:6483323 NCBI chr 1:66,214,337...66,481,742
Ensembl chr 1:66,214,432...66,481,742
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 ISO protein:increased expression:white matter and grey matter: RGD PMID:10331432 RGD:10412645 NCBI chr10:19,809,847...20,018,496
Ensembl chr10:19,810,218...20,018,499
JBrowse link
G Mapt microtubule-associated protein tau treatment ISO RGD PMID:22052241 RGD:8158113 NCBI chr11:104,120,235...104,222,916
Ensembl chr11:104,122,216...104,222,916
JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 ISO protein:increased expression:spinal cord RGD PMID:23595775 RGD:10412063 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663
JBrowse link
G Met met proto-oncogene ISO mRNA, protein:increased expression:spinal cord (rat) RGD PMID:17549731 RGD:2317487 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979
JBrowse link
G Mfn1 mitofusin 1 treatment ISO protein:altered expression:spinal cord, mitochondrion (rat) RGD PMID:26981103 PMID:26079325 RGD:12910837, RGD:12437066 NCBI chr 3:32,583,594...32,633,384
Ensembl chr 3:32,583,614...32,633,388
JBrowse link
G Mfn2 mitofusin 2 treatment ISO protein:increased expression:spinal cord (rat) RGD PMID:28404953 PMID:26079325 RGD:12910735, RGD:12437066 NCBI chr 4:147,958,043...147,989,527
Ensembl chr 4:147,958,056...147,989,161
JBrowse link
G Mif macrophage migration inhibitory factor (glycosylation-inhibiting factor) ISO mRNA:increased expression:spinal cord, microglial cell RGD PMID:15067555 RGD:1641997 NCBI chr10:75,695,187...75,696,111
Ensembl chr10:75,695,187...75,696,074
JBrowse link
G Mir214 microRNA 214 treatment ISO RGD PMID:30287503 RGD:38549580 NCBI chr 1:162,050,937...162,051,046
Ensembl chr 1:162,050,937...162,051,046
JBrowse link
G Mir21a microRNA 21a exacerbates ISO RGD PMID:31102912 RGD:41410823 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984
JBrowse link
G Mir411 microRNA 411 ISO RGD PMID:29738767 RGD:13792580 NCBI chr12:109,676,609...109,676,690
Ensembl chr12:109,676,609...109,676,690
JBrowse link
G Mir494 microRNA 494 ameliorates ISO RGD PMID:28601045 RGD:156420142 NCBI chr12:109,681,752...109,681,836
Ensembl chr12:109,681,752...109,681,836
JBrowse link
G Mmp2 matrix metallopeptidase 2 treatment ISO RGD PMID:24436993 RGD:8657106 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048
JBrowse link
G Mmp9 matrix metallopeptidase 9 treatment ISO RGD PMID:25763638 RGD:12791993 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770
JBrowse link
G Mpo myeloperoxidase ISO protein:increased activity:spinal cord RGD PMID:22986158 RGD:6909148 NCBI chr11:87,684,610...87,695,238
Ensembl chr11:87,684,407...87,695,239
JBrowse link
G Mrc1 mannose receptor, C type 1 treatment ISO RGD PMID:24968269 RGD:40924652 NCBI chr 2:14,234,225...14,336,834
Ensembl chr 2:14,234,203...14,336,868
JBrowse link
G mt-Nd3 NADH dehydrogenase 3, mitochondrial ISO RGD PMID:20438613 RGD:5687694 NCBI chr MT:9,459...9,806
Ensembl chr MT:9,459...9,806
JBrowse link
G Mtor mechanistic target of rapamycin kinase treatment ISO RGD PMID:20678995 RGD:10040962 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140
JBrowse link
G Myrf myelin regulatory factor ameliorates ISO RGD PMID:27370227 RGD:213230157 NCBI chr19:10,185,635...10,218,134
Ensembl chr19:10,185,636...10,218,112
JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D ISO mRNA:increased expression:spinal cord RGD PMID:18930143 RGD:2316199 NCBI chr 5:21,867,899...21,906,620
Ensembl chr 5:21,867,899...21,906,394
JBrowse link
G Ncf2 neutrophil cytosolic factor 2 ISO protein:increased expression:spinal cord RGD PMID:14644473 RGD:2314450 NCBI chr 1:152,675,904...152,712,743
Ensembl chr 1:152,675,945...152,712,742
JBrowse link
G Nefh neurofilament, heavy polypeptide treatment ISO RGD PMID:18772508 PMID:32168135 RGD:9698443, RGD:27226888 NCBI chr11:4,888,754...4,898,064
Ensembl chr11:4,888,754...4,898,064
JBrowse link
G Nefl neurofilament, light polypeptide treatment ISO RGD PMID:18772508 RGD:9698443 NCBI chr14:68,321,312...68,326,544
Ensembl chr14:68,321,312...68,326,544
JBrowse link
G Nefm neurofilament, medium polypeptide treatment ISO RGD PMID:18772508 RGD:9698443 NCBI chr14:68,356,994...68,362,453
Ensembl chr14:68,320,039...68,362,295
JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 treatment ISO RGD PMID:24747453 RGD:10412730 NCBI chr 2:75,505,860...75,535,007
Ensembl chr 2:75,505,857...75,534,985
JBrowse link
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha treatment ISO RGD PMID:21134362 RGD:10413867 NCBI chr12:55,536,194...55,539,432
Ensembl chr12:55,536,195...55,539,432
JBrowse link
G Ngf nerve growth factor ISO RGD PMID:16915089 PMID:12499054 RGD:5144069, RGD:5144073 NCBI chr 3:102,377,235...102,428,329
Ensembl chr 3:102,377,235...102,428,329
JBrowse link
G Ngfr nerve growth factor receptor (TNFR superfamily, member 16) treatment ISO mRNA:increased expression:spinal cord RGD PMID:11223160 PMID:23748892 RGD:5144100, RGD:10414079 NCBI chr11:95,459,644...95,478,524
Ensembl chr11:95,459,644...95,478,561
JBrowse link
G Nkx6-1 NK6 homeobox 1 ISO RGD PMID:18687784 RGD:2311166 NCBI chr 5:101,807,050...101,812,577
Ensembl chr 5:101,806,005...101,812,862
JBrowse link
G Nlk nemo like kinase ISO protein:increased expression:grey matter: RGD PMID:24395089 RGD:12791278 NCBI chr11:78,457,994...78,588,848
Ensembl chr11:78,457,994...78,588,199
JBrowse link
G Nog noggin treatment IDA RGD PMID:18221366 RGD:10429192 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158
JBrowse link
G Nos1 nitric oxide synthase 1, neuronal ISO protein:increased expression:spinal cord RGD PMID:20633123 PMID:19291395 RGD:5131936, RGD:5132595 NCBI chr 5:118,004,904...118,096,905
Ensembl chr 5:117,919,097...118,096,905
JBrowse link
G Nos2 nitric oxide synthase 2, inducible ISO mRNA:altered expression:thoracic aorta RGD PMID:17287083 RGD:4891407 NCBI chr11:78,811,613...78,851,052
Ensembl chr11:78,811,613...78,851,080
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell ISO RGD PMID:17287083 RGD:4891407 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472
JBrowse link
G Nox4 NADPH oxidase 4 ISO mRNA,protein:increased expression:gastrocnemius muscle RGD PMID:27998200 RGD:329853757 NCBI chr 7:86,893,638...87,047,918
Ensembl chr 7:86,895,304...87,047,918
JBrowse link
G Nqo1 NAD(P)H dehydrogenase, quinone 1 treatment ISO protein:increased expression:spinal cord (rat) RGD PMID:24747453 PMID:28881715 RGD:10412730, RGD:13434916 NCBI chr 8:108,114,856...108,139,012
Ensembl chr 8:108,114,857...108,129,838
JBrowse link
G Nrg1 neuregulin 1 exacerbates
ameliorates
IMP
ISO
RGD PMID:26993800 PMID:20734425 RGD:11056189, RGD:405650600 NCBI chr 8:32,299,493...33,381,858
Ensembl chr 8:32,304,579...33,374,825
Ensembl chr 8:32,304,579...33,374,825
JBrowse link
G Ntf3 neurotrophin 3 ISO RGD PMID:16022868 RGD:4891112 NCBI chr 6:126,078,375...126,143,703
Ensembl chr 6:126,078,375...126,143,873
JBrowse link
G Ntf5 neurotrophin 5 ISO mRNA:decreased expression:spinal cord RGD PMID:25476166 RGD:597015775 NCBI chr 7:45,063,119...45,066,603
Ensembl chr 7:45,063,119...45,066,603
JBrowse link
G Ntrk1 neurotrophic tyrosine kinase, receptor, type 1 ISO mRNA:decreased expression:spinal cord RGD PMID:18585435 RGD:2308892 NCBI chr 3:87,685,551...87,702,549
Ensembl chr 3:87,685,551...87,702,469
JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 ISO mRNA:altered expression:spinal cord RGD PMID:22027236 PMID:25476166 PMID:20597685 RGD:5684547, RGD:597015775, RGD:5684898 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784
JBrowse link
G Ntrk3 neurotrophic tyrosine kinase, receptor, type 3 ISO mRNA:decreased expression:spinal cord RGD PMID:18585435 RGD:2308892 NCBI chr 7:77,825,711...78,228,865
Ensembl chr 7:77,825,707...78,387,760
JBrowse link
G Olig2 oligodendrocyte transcription factor 2 treatment IMP
ISO
RGD PMID:28452182 PMID:22173726 RGD:40902836, RGD:40902844 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565
JBrowse link
G P2rx7 purinergic receptor P2X, ligand-gated ion channel, 7 ISO CTD Direct Evidence: therapeutic CTD PMID:15258577 NCBI chr 5:122,781,990...122,830,399
Ensembl chr 5:122,781,974...122,829,495
JBrowse link
G Parp1 poly (ADP-ribose) polymerase family, member 1 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:15696051 PMID:21748659 RGD:10053608 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819
JBrowse link
G Pdcd1 programmed cell death 1 treatment ISO RGD PMID:29665726 RGD:40886268 NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278
JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 ISO mRNA:increased expression:microglial cell RGD PMID:29665726 RGD:40886268 NCBI chr19:29,388,319...29,450,327
Ensembl chr19:29,388,319...29,448,561
JBrowse link
G Pde4d phosphodiesterase 4D, cAMP specific treatment ISO RGD PMID:24970286 RGD:407550181 NCBI chr13:108,790,711...110,092,503
Ensembl chr13:108,586,482...110,089,995
JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide IDA RGD PMID:21568693 RGD:6482306 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178
JBrowse link
G Pla2g2a phospholipase A2, group IIA (platelets, synovial fluid) IEP
ISO
protein:increased expression:spinal cord RGD PMID:21868473 PMID:19306380 RGD:6482718, RGD:6482721 NCBI chr 4:138,559,168...138,562,500
Ensembl chr 4:138,559,171...138,562,497
JBrowse link
G Pla2g6 phospholipase A2, group VI IEP protein:increased expression:spinal cord RGD PMID:21868473 RGD:6482718 NCBI chr15:79,170,428...79,212,915
Ensembl chr15:79,170,428...79,212,590
JBrowse link
G Plau plasminogen activator, urokinase IMP RGD PMID:21573723 RGD:6483797 NCBI chr14:20,886,730...20,893,456
Ensembl chr14:20,886,728...20,893,453
JBrowse link
G Plaur plasminogen activator, urokinase receptor IMP RGD PMID:21573723 RGD:6483797 NCBI chr 7:24,161,857...24,175,393
Ensembl chr 7:24,161,909...24,175,393
JBrowse link
G Pon1 paraoxonase 1 treatment ISO RGD PMID:12897486 RGD:8547682 NCBI chr 6:5,168,101...5,193,824
Ensembl chr 6:5,168,090...5,193,946
JBrowse link
G Ppard peroxisome proliferator activator receptor delta ISO RGD PMID:20058304 RGD:2324875 NCBI chr17:28,451,715...28,520,446
Ensembl chr17:28,451,674...28,520,448
JBrowse link
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha ISO RGD PMID:22208735 RGD:6484263 NCBI chr 5:51,611,591...52,273,316
Ensembl chr 5:51,611,592...51,725,068
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISO protein:increased expression:spinal cord, astrocyte, microglial cell RGD PMID:29033188 RGD:13514047 NCBI chr 5:122,296,338...122,313,336
Ensembl chr 5:122,296,341...122,313,336
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A ISO mRNA:increased expression:spinal cord (rat)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:29793971 PMID:17578450 RGD:9999410 NCBI chr 7:45,172,341...45,175,692
Ensembl chr 7:45,172,340...45,175,692
JBrowse link
G Prkcg protein kinase C, gamma IEP protein:decreased expression:spinal cord (mouse) RGD PMID:10501452 RGD:28867228 NCBI chr 7:3,352,038...3,379,615
Ensembl chr 7:3,337,704...3,379,615
JBrowse link
G Pten phosphatase and tensin homolog ISO mRNA:increased expression:spinal cord: RGD PMID:28601045 RGD:156420142 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 ISO protein:increased expression:microglia, macrophage RGD PMID:17184185 PMID:11063829 RGD:5688221, RGD:5688246 NCBI chr 2:36,106,758...36,142,287
Ensembl chr 2:36,120,438...36,142,284
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18606213 RGD:5135219 NCBI chr 1:149,975,851...149,983,978
Ensembl chr 1:149,975,782...149,983,978
JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z, polypeptide 1 treatment ISO RGD PMID:15016081 PMID:18065151 PMID:12895450 RGD:9589823, RGD:9590124, RGD:9590113 NCBI chr 6:22,875,302...23,052,915
Ensembl chr 6:22,875,501...23,052,915
JBrowse link
G Rad21 RAD21 cohesin complex component treatment ISO RGD PMID:33741460 RGD:243065262 NCBI chr15:51,826,000...51,856,934
Ensembl chr15:51,825,636...51,855,143
JBrowse link
G Rara retinoic acid receptor, alpha ISO RGD PMID:16420438 RGD:2314291 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768
JBrowse link
G Rbmx RNA binding motif protein, X chromosome ISO RGD PMID:23180094 RGD:10053723 NCBI chr  X:56,428,708...56,438,405
Ensembl chr  X:56,428,890...56,438,396
JBrowse link
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) ISO RGD PMID:17918744 RGD:2298849 NCBI chr19:5,686,993...5,698,162
Ensembl chr19:5,687,511...5,698,158
JBrowse link
G Rgma repulsive guidance molecule family member A treatment ISO RGD PMID:16585268 RGD:9850138 NCBI chr 7:73,025,268...73,069,647
Ensembl chr 7:73,025,257...73,069,647
JBrowse link
G Rhoa ras homolog family member A ISO mRNA,protein:increased expression:spinal cord: RGD PMID:27893610 RGD:243048440 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133
JBrowse link
G Robo1 roundabout guidance receptor 1 ISO mRNA,protein:increased expression:spinal cord: RGD PMID:27893610 RGD:243048440 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983
JBrowse link
G Rpsa ribosomal protein SA ISO RGD PMID:19196078 RGD:11041651 NCBI chr 9:119,956,832...119,961,435
Ensembl chr 9:119,956,755...119,961,435
JBrowse link
G Ryr1 ryanodine receptor 1, skeletal muscle ISO protein:hyperoxidation,hypernitrosylation:gastrocnemius muscle RGD PMID:27998200 RGD:329853757 NCBI chr 7:28,702,765...28,824,599
Ensembl chr 7:28,702,769...28,824,604
JBrowse link
G Scn3a sodium channel, voltage-gated, type III, alpha ISO RGD PMID:16109750 PMID:16718433 RGD:2317320 RGD:2317321 NCBI chr 2:65,287,462...65,397,935
Ensembl chr 2:65,288,607...65,397,971
JBrowse link
G Serpinc1 serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 treatment ISO RGD PMID:15792522 RGD:1599333 NCBI chr 1:160,806,153...160,830,113
Ensembl chr 1:160,806,155...160,833,433
JBrowse link
G Shh sonic hedgehog treatment ISO RGD PMID:24837681 RGD:12879409 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Siah1a siah E3 ubiquitin protein ligase 1A treatment ISO RGD PMID:27256506 RGD:13792677 NCBI chr 8:87,442,450...87,472,634
Ensembl chr 8:87,450,635...87,472,562
JBrowse link
G Slc25a27 solute carrier family 25, member 27 IEP protein:increased expression:spinal cord RGD PMID:18534681 RGD:6482843 NCBI chr17:43,948,630...43,978,105
Ensembl chr17:43,952,782...43,978,105
JBrowse link
G Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 ISO protein:increased expression:spinal cord RGD PMID:19388351 RGD:151361131 NCBI chr 8:122,607,885...122,634,425
Ensembl chr 8:122,607,889...122,634,433
JBrowse link
G Slit1 slit guidance ligand 1 IEP RGD PMID:16262652 RGD:2316136 NCBI chr19:41,586,263...41,735,714
Ensembl chr19:41,588,696...41,732,104
JBrowse link
G Slit2 slit guidance ligand 2 ISO mRNA, protein:increased expression:spinal cord
mRNA,protein:decreased expression:spinal cord:
RGD PMID:19783284 PMID:27893610 RGD:2316127, RGD:243048440 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075
JBrowse link
G Slit3 slit guidance ligand 3 IEP RGD PMID:16262652 RGD:2316136 NCBI chr11:35,012,283...35,599,334
Ensembl chr11:35,012,051...35,599,334
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO protein:increased expression:spinal cord RGD PMID:23595775 RGD:10412063 NCBI chr 5:144,813,305...144,902,657
Ensembl chr 5:144,813,305...144,902,657
JBrowse link
G Socs2 suppressor of cytokine signaling 2 ISO RGD PMID:11723173 RGD:2298928 NCBI chr10:95,219,765...95,253,176
Ensembl chr10:95,221,224...95,253,042
JBrowse link
G Sod1 superoxide dismutase 1, soluble treatment ISO human protein in a rat model
CTD Direct Evidence: therapeutic
human gene in a rat model
CTD
RGD
PMID:17457363 PMID:18722523 PMID:16689664 RGD:8655939, RGD:8655990 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IEP mRNA, protein:increased expression:spinal cord RGD PMID:23169458 RGD:8661675 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Sparc secreted acidic cysteine rich glycoprotein IMP RGD PMID:17611274 RGD:2300052 NCBI chr11:55,284,985...55,310,906
Ensembl chr11:55,285,326...55,314,009
JBrowse link
G Spp1 secreted phosphoprotein 1 IDA RGD PMID:15592854 RGD:6483848 NCBI chr 5:104,582,977...104,588,919
Ensembl chr 5:104,582,984...104,588,916
JBrowse link
G Sqstm1 sequestosome 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr11:50,090,979...50,105,303
Ensembl chr11:50,090,193...50,101,654
JBrowse link
G Tacr1 tachykinin receptor 1 ISO RGD PMID:18945947 RGD:2304258 NCBI chr 6:82,378,990...82,537,085
Ensembl chr 6:82,379,315...82,537,085
JBrowse link
G Tbp TATA box binding protein ISO protein:increased expression:spinal cord, astrocyte, microglial cell RGD PMID:24710803 RGD:9681729 NCBI chr17:15,720,150...15,737,689
Ensembl chr17:15,720,150...15,748,641
JBrowse link
G Tert telomerase reverse transcriptase ISO mRNA, protein:increased expression:spinal cord RGD PMID:15798365 PMID:23793903 RGD:2291993, RGD:11038671 NCBI chr13:73,775,030...73,797,962
Ensembl chr13:73,775,030...73,797,962
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO RGD PMID:15145083 RGD:2302103 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO RGD PMID:15145083 RGD:2302103 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
JBrowse link
G Thbd thrombomodulin ISO RGD PMID:15307903 RGD:1580060 NCBI chr 2:148,246,391...148,250,108
Ensembl chr 2:148,246,386...148,250,108
JBrowse link
G Thbs1 thrombospondin 1 ISO protein:increased expression:spinal cord RGD PMID:19719963 RGD:2317939 NCBI chr 2:117,942,357...117,957,614
Ensembl chr 2:117,942,357...117,957,614
JBrowse link
G Tlr1 toll-like receptor 1 treatment IEP
IDA
mRNA:increased expression:spinal cord (mouse) RGD PMID:21970496 PMID:21970496 RGD:7246886, RGD:7246886 NCBI chr 5:65,082,023...65,090,945
Ensembl chr 5:65,082,022...65,090,906
JBrowse link
G Tlr2 toll-like receptor 2 treatment ISO RGD PMID:24966901 RGD:597538512 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074
JBrowse link
G Tlr4 toll-like receptor 4 severity IMP RGD PMID:25990044 RGD:14700556 NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521
JBrowse link
G Tnc tenascin C ISO mRNA:increased expression:spinal cord RGD PMID:11085900 RGD:4889619 NCBI chr 4:63,878,022...63,965,554
Ensembl chr 4:63,878,022...63,965,252
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:20633123 RGD:5131936 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a ISO protein:increased expression:cerebrospinal fluid RGD PMID:16083358 RGD:1624185 NCBI chr 6:125,326,686...125,339,446
Ensembl chr 6:125,326,325...125,339,447
JBrowse link
G Traf7 TNF receptor-associated factor 7 ISO mRNA, protein:increased expression:spinal cord RGD PMID:30100091 RGD:151356968 NCBI chr17:24,727,824...24,746,912
Ensembl chr17:24,727,536...24,746,912
JBrowse link
G Trp53 transformation related protein 53 ISO protein:increased expression:spinal cord RGD PMID:23595775 RGD:10412063 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 ISO mRNA,protein:increased expression:urinary bladder, dorsal root ganglion: RGD PMID:21367919 RGD:10043365 NCBI chr 1:14,942,868...14,989,086
Ensembl chr 1:14,942,872...14,989,086
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 treatment ISO RGD PMID:19169264 PMID:25763638 RGD:10003030, RGD:12791993 NCBI chr 7:44,952,579...44,983,495
Ensembl chr 7:44,952,056...44,983,204
JBrowse link
G Tug1 taurine upregulated gene 1 treatment ISO RGD PMID:30287503 RGD:38549580 NCBI chr11:3,589,313...3,599,021
Ensembl chr11:3,589,785...3,599,673
JBrowse link
G Ulk1 unc-51 like kinase 1 ISO protein:increased expression:neuron, axon RGD PMID:25040536 RGD:11553820 NCBI chr 5:110,932,355...110,957,991
Ensembl chr 5:110,932,354...110,957,963
JBrowse link
G Vegfa vascular endothelial growth factor A ISO protein:increased expression:spinal cord
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:21092735 PMID:21092735 RGD:5148013 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:20125055 RGD:2325181 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594
JBrowse link
G Vim vimentin IMP
ISO
protein:increased expression:spinal cord RGD PMID:10225952 PMID:21250919 RGD:6480471, RGD:6480511 NCBI chr 2:13,579,122...13,587,637
Ensembl chr 2:13,578,738...13,587,637
JBrowse link
G Vwf Von Willebrand factor ISO RGD PMID:25771801 RGD:13673888 NCBI chr 6:125,529,911...125,663,642
Ensembl chr 6:125,523,737...125,663,642
JBrowse link
G Xbp1 X-box binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893
JBrowse link
G Xdh xanthine dehydrogenase ISO protein:increased expression:spinal cord RGD PMID:1649310 RGD:13209021 NCBI chr17:74,190,890...74,257,191
Ensembl chr17:74,190,890...74,257,191
JBrowse link
G Xylt1 xylosyltransferase 1 ISO RGD PMID:18765417 RGD:2313145 NCBI chr 7:116,980,214...117,266,853
Ensembl chr 7:116,980,214...117,272,803
JBrowse link
Spinal Cord Compression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO mRNA, protein:increased expression, increased activity:spinal cord (rat) RGD PMID:22425718 RGD:10449098 NCBI chr 2:26,863,363...26,899,638
Ensembl chr 2:26,863,428...26,899,640
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 ISO mRNA, protein:increased expression:dorsal root ganglion (rat) RGD PMID:23613963 RGD:14390159 NCBI chr 9:107,930,358...107,932,900
Ensembl chr 9:107,930,358...107,932,900
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 ISO mRNA, protein:increased expression:liver, serum (rat)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:15135227 PMID:15855648 RGD:11526154 NCBI chr11:81,926,403...81,928,278
Ensembl chr11:81,926,397...81,928,279
JBrowse link
G Cd163 CD163 antigen disease_progression ISO protein:increased expression:gray matter of spinal cord, white matter of spinal cord (rat) RGD PMID:23775900 RGD:149735576 NCBI chr 6:124,281,596...124,307,488
Ensembl chr 6:124,281,615...124,307,486
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 exacerbates IMP RGD PMID:26586562 RGD:155663489 NCBI chr 2:118,756,978...118,759,066
Ensembl chr 2:118,756,977...118,759,066
JBrowse link
G Egr1 early growth response 1 ISO protein:increased expression:spinal cord dorsal horn (rat) RGD PMID:20675054 RGD:5131876 NCBI chr18:34,994,260...34,998,009
Ensembl chr18:34,992,876...34,998,037
JBrowse link
G Elane elastase, neutrophil expressed treatment ISO RGD PMID:9675307 RGD:10450552 NCBI chr10:79,722,146...79,724,050
Ensembl chr10:79,722,081...79,724,049
JBrowse link
G Epo erythropoietin ISO protein:increased expression:neuron, endothelium, glia: RGD PMID:15792521 RGD:11041719 NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504
JBrowse link
G Epor erythropoietin receptor ISO protein:increased expression:neuron, endothelium, glia: RGD PMID:15792521 RGD:11041719 NCBI chr 9:21,870,193...21,874,915
Ensembl chr 9:21,870,193...21,874,802
JBrowse link
G Fas Fas cell surface death receptor treatment ISO
IMP
human protein in a rat model
protein:increased expression:spinal cord:
RGD PMID:16689665 PMID:16202410 PMID:21490053 RGD:1582444, RGD:8663485, RGD:12904017 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fasl Fas ligand treatment ISO
IMP
protein:increased expression:spinal cord: RGD PMID:21490053 PMID:21490053 RGD:12904017, RGD:12904017 NCBI chr 1:161,608,260...161,616,064
Ensembl chr 1:161,608,258...161,616,064
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO protein:increased expression:spinal cord RGD PMID:17244329 RGD:8655633 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO protein:increased expression:spinal cord (rat) RGD PMID:28981091 RGD:155782905 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Fis1 fission, mitochondrial 1 treatment ISO RGD PMID:25595990 RGD:12437079 NCBI chr 5:136,982,129...136,995,088
Ensembl chr 5:136,982,129...136,995,088
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 ISO protein:decreased expression:spinal cord, thoracic vertebrae (rat) RGD PMID:20399821 RGD:2326108 NCBI chr13:120,151,887...120,169,796
Ensembl chr13:120,151,915...120,169,796
JBrowse link
G Hspa4 heat shock protein 4 IEP protein:increased expression:spinal cord (mouse) RGD PMID:21787762 RGD:6218959 NCBI chr11:53,150,641...53,191,306
Ensembl chr11:53,150,641...53,191,284
JBrowse link
G Il6 interleukin 6 ISO protein:increased expression:cerebrospinal fluid, serum RGD PMID:30327453 RGD:14975119 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979
JBrowse link
G Itgam integrin alpha M treatment ISO RGD PMID:19457130 RGD:329902059 NCBI chr 7:127,661,812...127,717,663
Ensembl chr 7:127,661,812...127,717,663
JBrowse link
G L1cam L1 cell adhesion molecule IMP RGD PMID:21671795 RGD:6483029 NCBI chr  X:72,897,384...72,924,843
Ensembl chr  X:72,897,384...72,939,711
JBrowse link
G Mir17 microRNA 17 treatment ISO RGD PMID:31115018 RGD:329403058 NCBI chr14:115,281,103...115,281,186
Ensembl chr14:115,281,103...115,281,186
JBrowse link
G Mt2 metallothionein 2 IEP mRNA:increased expression:spinal cord (mouse) RGD PMID:15592854 RGD:6483848 NCBI chr 8:94,899,246...94,900,195
Ensembl chr 8:94,899,292...94,900,196
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell treatment ISO RGD PMID:29323048 RGD:13504709 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472
JBrowse link
G Plat plasminogen activator, tissue ISO CTD Direct Evidence: marker/mechanism CTD PMID:12227717 NCBI chr 8:23,247,655...23,272,864
Ensembl chr 8:23,247,743...23,272,860
JBrowse link
G Tnf tumor necrosis factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:15135227 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a ISO protein:increased expression:spinal cord (rat) RGD PMID:21224756 RGD:5130917 NCBI chr 6:125,326,686...125,339,446
Ensembl chr 6:125,326,325...125,339,447
JBrowse link
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b ISO human protein in rat model
protein:increased expression:spinal cord (rat)
RGD PMID:21224756 PMID:21224756 RGD:5130917, RGD:5130917 NCBI chr 4:144,938,938...144,973,453
Ensembl chr 4:144,940,033...144,973,440
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16273
    Wounds and Injuries 1004
      Spinal Cord Injuries 290
        Autonomic Dysreflexia 0
        Central Cord Syndrome 0
        Spinal Cord Compression 26
Path 2
Term Annotations click to browse term
  disease 16273
    disease of anatomical entity 15866
      nervous system disease 13800
        central nervous system disease 12316
          spinal cord disease 1974
            Spinal Cord Injuries 290
              Autonomic Dysreflexia 0
              Central Cord Syndrome 0
              Spinal Cord Compression 26
paths to the root