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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Spinal Cord Injuries
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Accession:DOID:9000039 term browser browse the term
Definition:Penetrating and non-penetrating injuries to the spinal cord resulting from traumatic external forces (e.g., WOUNDS, GUNSHOT; WHIPLASH INJURIES; etc.).
Synonyms:exact_synonym: Post Traumatic Myelopathy;   Post-Traumatic Myelopathies;   Spinal Cord Contusion;   Spinal Cord Contusions;   Spinal Cord Injury;   Spinal Cord Laceration;   Spinal Cord Lacerations;   Spinal Cord Transection;   Spinal Cord Transections;   Spinal Cord Trauma;   Spinal Cord Traumas;   Traumatic Myelopathies;   Traumatic Myelopathy
 narrow_synonym: acute spinal cord injury
 primary_id: MESH:D013119;   RDO:0006597
 xref: EFO:1001919


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Spinal Cord Injuries term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC8 ATP binding cassette subfamily C member 8 treatment IEP
ISO		 mRNA:increased expression:spinal cord RGD PMID:20410530 PMID:25763638 PMID:20410530 PMID:20410530 RGD:12790978, RGD:12791993, RGD:12790978, RGD:12790978 NCBI chr11:17,392,498...17,476,845
Ensembl chr11:17,392,498...17,476,894 		JBrowse link
G ACAN aggrecan ISO protein:altered expression:spinal cord (rat) RGD PMID:14769391 RGD:2315837 NCBI chr15:88,803,436...88,875,353
Ensembl chr15:88,803,436...88,875,353 		JBrowse link
G ADARB1 adenosine deaminase RNA specific B1 ISO RGD PMID:20456005 RGD:10755338 NCBI chr21:45,074,578...45,226,563
Ensembl chr21:45,073,853...45,226,560 		JBrowse link
G ADCYAP1 adenylate cyclase activating polypeptide 1 ISO protein:altered expression:spinal cord,dorsal root ganglion, urinary bladder RGD PMID:15698618 PMID:15913892 RGD:2325309, RGD:2325306 NCBI chr18:904,411...912,172
Ensembl chr18:904,871...912,172 		JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing IEP protein:increased expression:serum RGD PMID:16213239 RGD:5686719 NCBI chr 3:186,842,710...186,858,463
Ensembl chr 3:186,842,704...186,858,463 		JBrowse link
G ADORA1 adenosine A1 receptor ISO protein:decreased expression:spinal cord RGD PMID:18289533 PMID:17853654 RGD:5129096, RGD:4890369 NCBI chr 1:203,127,726...203,167,405
Ensembl chr 1:203,090,654...203,167,405 		JBrowse link
G ADORA2A adenosine A2a receptor ISO RGD PMID:17559837 RGD:4890378 NCBI chr22:24,423,597...24,442,357
Ensembl chr22:24,417,879...24,442,357 		JBrowse link
G ADRA1A adrenoceptor alpha 1A ISO mRNA:increased expression:aorta RGD PMID:16524515 RGD:5688371 NCBI chr 8:26,748,150...26,867,379
Ensembl chr 8:26,748,150...26,867,278 		JBrowse link
G AGER advanced glycosylation end-product specific receptor ISO protein:increased expression:spinal cord (rat) RGD PMID:20195207 RGD:2325645 NCBI chr 6:32,180,969...32,184,253
Ensembl chr 6:32,180,968...32,184,322 		JBrowse link
G AIF1 allograft inflammatory factor 1 ISO protein:altered expression:spinal cord dorsal horn (rat) RGD PMID:17158026 RGD:2313037 NCBI chr 6:31,615,234...31,617,015
Ensembl chr 6:31,615,217...31,617,021 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:20678995 RGD:10040962 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751 		JBrowse link
G AKT1S1 AKT1 substrate 1 EXP CTD Direct Evidence: therapeutic CTD PMID:17457363 NCBI chr19:49,869,033...49,878,356
Ensembl chr19:49,869,033...49,878,459 		JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr11:46,396,412...46,594,023
Ensembl chr11:46,396,414...46,594,125 		JBrowse link
G ANKRD1 ankyrin repeat domain 1 ISO mRNA:increased expression:spinal cord, dorsal root ganglion, neuron RGD PMID:17610582 RGD:5133279 NCBI chr10:90,912,096...90,921,087
Ensembl chr10:90,912,096...90,921,087 		JBrowse link
G ANP32B acidic nuclear phosphoprotein 32 family member B ISO RGD PMID:25034417 RGD:10401137 NCBI chr 9:97,983,341...98,015,943
Ensembl chr 9:97,983,341...98,015,943 		JBrowse link
G ANXA1 annexin A1 treatment IDA
ISO		 mRNA,protein:increased expression:neuron,glial cell RGD PMID:17917587 PMID:15248295 RGD:2306891, RGD:10053688 NCBI chr 9:73,151,865...73,170,393
Ensembl chr 9:73,151,865...73,170,393 		JBrowse link
G ANXA2 annexin A2 ISO mRNA,protein:increased expression:neuron,glial cell RGD PMID:15248295 RGD:10053688 NCBI chr15:60,347,151...60,397,986
Ensembl chr15:60,347,134...60,402,883 		JBrowse link
G ANXA5 annexin A5 ISO mRNA,protein:increased expression:neuron,glial cell RGD PMID:15248295 RGD:10053688 NCBI chr 4:121,667,946...121,696,980
Ensembl chr 4:121,667,946...121,696,995 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 ISO RGD PMID:21748659 RGD:10053608 NCBI chr12:98,645,290...98,735,433
Ensembl chr12:98,645,290...98,735,433 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 ISO mRNA:increased expression:spinal cord RGD PMID:18637713 RGD:2315670 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772 		JBrowse link
G APOE apolipoprotein E IAGP
ISO		 DNA:polymorphism:exon: RGD PMID:18581664 PMID:30036659 RGD:7771551, RGD:13703128 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393 		JBrowse link
G AQP1 aquaporin 1 (Colton blood group) ISO
EXP		 protein:increased expression:spinal cord, neuron, astrocyte
CTD Direct Evidence: marker/mechanism		 CTD
RGD		 PMID:21092735 PMID:18248364 PMID:21092735 RGD:2307072, RGD:5148013 NCBI chr 7:30,911,853...30,925,516
Ensembl chr 7:30,911,853...30,925,517 		JBrowse link
G AQP4 aquaporin 4 ISO
EXP		 CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:21092735 PMID:21092735 PMID:21280976 PMID:20517941 RGD:5148013, RGD:5148035, RGD:5148027 NCBI chr18:26,852,038...26,865,803
Ensembl chr18:26,852,043...26,865,771 		JBrowse link
G ATF4 activating transcription factor 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683 		JBrowse link
G ATG5 autophagy related 5 ISO
EXP		 protein:increased expression:axon
CTD Direct Evidence: marker/mechanism		 CTD
RGD		 PMID:29793971 PMID:25040536 RGD:11553820 NCBI chr 6:106,184,476...106,325,760
Ensembl chr 6:106,045,423...106,325,791 		JBrowse link
G ATG7 autophagy related 7 ISO protein:increased expression:axon RGD PMID:25040536 RGD:11553820 NCBI chr 3:11,272,397...11,576,353
Ensembl chr 3:11,272,309...11,557,665 		JBrowse link
G ATM ATM serine/threonine kinase ISO protein:increased expression:spinal cord RGD PMID:21748659 RGD:10053608 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G ATP2A1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ISO protein:decreased expression:tail, skeletal muscle RGD PMID:21930674 RGD:13782071 NCBI chr16:28,878,488...28,904,466
Ensembl chr16:28,878,405...28,904,466 		JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO protein:decreased expression:tail, skeletal muscle RGD PMID:21930674 RGD:13782071 NCBI chr12:110,280,616...110,351,093
Ensembl chr12:110,280,756...110,351,093 		JBrowse link
G BAMBI BMP and activin membrane bound inhibitor ISO mRNA,protein:decreased expression:spinal cord: RGD PMID:28035406 RGD:14390163 NCBI chr10:28,677,521...28,682,932
Ensembl chr10:28,677,510...28,682,932 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator treatment ISO RGD PMID:27256506 RGD:13792677 NCBI chr19:48,954,875...48,961,798
Ensembl chr19:48,954,815...48,961,798 		JBrowse link
G BCAN brevican treatment ISO RGD PMID:15016081 RGD:9589823 NCBI chr 1:156,642,117...156,659,528
Ensembl chr 1:156,641,390...156,659,532 		JBrowse link
G BCL2 BCL2 apoptosis regulator treatment ISO RGD PMID:27256506 RGD:13792677 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G BDNF brain derived neurotrophic factor treatment IMP
ISO		 RGD PMID:16022868 PMID:24551172 PMID:19203225 RGD:4891112, RGD:10059354, RGD:4891066 NCBI chr11:27,654,893...27,722,030
Ensembl chr11:27,654,893...27,722,058 		JBrowse link
G BECN1 beclin 1 treatment ISO
EXP		 protein:increased expression:spinal cord
CTD Direct Evidence: marker/mechanism		 CTD
RGD		 PMID:29793971 PMID:21806471 PMID:23852559 PMID:24559459 RGD:6483100, RGD:11561922, RGD:11561918 NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350 		JBrowse link
G BMP2 bone morphogenetic protein 2 ISO RGD PMID:23770801 RGD:9068404 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246 		JBrowse link
G BMP4 bone morphogenetic protein 4 treatment ISO
IDA		 RGD PMID:23770801 PMID:18803859 RGD:9068404, RGD:9068437 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G BNIP3 BCL2 interacting protein 3 ISO protein:increased expression:spinal cord RGD PMID:23637053 RGD:11564330 NCBI chr10:131,967,684...131,981,923
Ensembl chr10:131,967,684...131,981,967 		JBrowse link
G BNIP3L BCL2 interacting protein 3 like ISO protein:increased expression:spinal cord RGD PMID:23637053 RGD:11564330 NCBI chr 8:26,383,054...26,413,127
Ensembl chr 8:26,383,054...26,505,636 		JBrowse link
G BRCA2 BRCA2 DNA repair associated ISO mRNA,protein:increased expression:spinal cord: RGD PMID:21748659 RGD:10053608 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G C1QB complement C1q B chain ISO mRNA:increased expression RGD PMID:16345062 RGD:1599510 NCBI chr 1:22,653,236...22,661,637
Ensembl chr 1:22,652,762...22,661,637 		JBrowse link
G CAPN1 calpain 1 treatment ISO RGD PMID:23102374 RGD:13792496 NCBI chr11:65,181,373...65,212,006
Ensembl chr11:65,180,566...65,212,006 		JBrowse link
G CAPZB capping actin protein of muscle Z-line subunit beta ISO protein:decreased expression:spinal cord RGD PMID:20141154 RGD:9685028 NCBI chr 1:19,338,775...19,485,539
Ensembl chr 1:19,338,775...19,485,539 		JBrowse link
G CASP1 caspase 1 ISO protein:increased expression, increased activation:spinal cord RGD PMID:18367607 RGD:2315889 NCBI chr11:105,025,443...105,036,686
Ensembl chr11:105,025,397...105,035,250 		JBrowse link
G CASP12 caspase 12 (gene/pseudogene) treatment ISO associated with Diabetes Mellitus, Experimental RGD PMID:19215662 PMID:26884858 RGD:2311450, RGD:11560925 NCBI chr11:104,883,286...104,898,460
Ensembl chr11:104,885,718...104,898,670 		JBrowse link
G CASP3 caspase 3 treatment ISO
EXP		 CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:14588118 PMID:18378144 PMID:27256506 PMID:27339639 PMID:21748659 RGD:2293322, RGD:13792677, RGD:13782345, RGD:10053608 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,650,062 		JBrowse link
G CASP9 caspase 9 treatment ISO RGD PMID:21748659 PMID:27339639 RGD:10053608, RGD:13782345 NCBI chr 1:15,491,401...15,524,912
Ensembl chr 1:15,490,832...15,526,534 		JBrowse link
G CAV1 caveolin 1 ISO protein:increased phosphorylation:spinal cord RGD PMID:17275798 RGD:2289124 NCBI chr 7:116,525,009...116,561,185
Ensembl chr 7:116,524,994...116,561,179 		JBrowse link
G CCL13 C-C motif chemokine ligand 13 ISO mRNA:increased expression:spinal cord RGD PMID:9698165 RGD:5135274 NCBI chr17:34,356,480...34,358,610
Ensembl chr17:34,356,480...34,358,610 		JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO mRNA:increased expression:spinal cord segment (mouse) RGD PMID:20478301 RGD:4889905 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793 		JBrowse link
G CCND3 cyclin D3 ISO protein:increased expression:spinal cord RGD PMID:18008145 RGD:2316019 NCBI chr 6:41,934,933...42,050,035
Ensembl chr 6:41,934,934...42,050,357 		JBrowse link
G CCNE1 cyclin E1 ISO protein:increased expression:spinal cord RGD PMID:16759516 RGD:2289281 NCBI chr19:29,811,991...29,824,312
Ensembl chr19:29,811,991...29,824,312 		JBrowse link
G CCNH cyclin H ISO mRNA, protein:increased expression:spinal cord RGD PMID:21710280 RGD:9590263 NCBI chr 5:87,311,471...87,412,930
Ensembl chr 5:87,318,416...87,413,029 		JBrowse link
G CCR1 C-C motif chemokine receptor 1 ISO RGD PMID:21332278 RGD:5688138 NCBI chr 3:46,201,711...46,208,313
Ensembl chr 3:46,201,711...46,208,313 		JBrowse link
G CCR2 C-C motif chemokine receptor 2 ISO protein:increased expression:spinal cord RGD PMID:18338959 RGD:4144888 NCBI chr 3:46,354,111...46,360,940
Ensembl chr 3:46,353,864...46,360,940 		JBrowse link
G CD274 CD274 molecule ISO mRNA:increased expression:microglial cell RGD PMID:29665726 RGD:40886268 NCBI chr 9:5,450,542...5,470,554
Ensembl chr 9:5,450,503...5,470,566 		JBrowse link
G CDC42 cell division cycle 42 ISO mRNA:increased expression:spinal cord RGD PMID:15736231 RGD:5688276 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360 		JBrowse link
G CDK1 cyclin dependent kinase 1 ISO protein:increased expression:spinal cord dura mater (rat) RGD PMID:19672039 RGD:2316488 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852 		JBrowse link
G CDK19 cyclin dependent kinase 19 ISO mRNA, protein:increased expression:spinal cord RGD PMID:18008145 RGD:2316019 NCBI chr 6:110,609,978...110,815,855
Ensembl chr 6:110,609,978...110,815,958 		JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B ISO protein:decreased expression, altered localization:spinal cord, neuron, microglial cell RGD PMID:18319192 RGD:2293615 NCBI chr12:12,717,368...12,722,369
Ensembl chr12:12,685,498...12,722,369 		JBrowse link
G CHL1 cell adhesion molecule L1 like ISO protein:increased expression:spinal cord (rat) RGD PMID:21337374 RGD:6483045 NCBI chr 3:196,763...409,417
Ensembl chr 3:196,763...409,417 		JBrowse link
G CNR1 cannabinoid receptor 1 ISO RGD PMID:18930143 RGD:2316199 NCBI chr 6:88,139,864...88,167,349
Ensembl chr 6:88,139,864...88,166,347 		JBrowse link
G CNR2 cannabinoid receptor 2 ISO RGD PMID:18930143 RGD:2316199 NCBI chr 1:23,870,515...23,913,362
Ensembl chr 1:23,870,515...23,913,362 		JBrowse link
G CR2 complement C3d receptor 2 ISO protein:increased expression:cerebrospinal fluid RGD PMID:26502875 RGD:11343913 NCBI chr 1:207,454,328...207,489,892
Ensembl chr 1:207,453,024...207,489,895 		JBrowse link
G CRH corticotropin releasing hormone ISO protein:altered expression:spinal cord (rat) RGD PMID:20458328 RGD:5490964 NCBI chr 8:66,176,376...66,178,464
Ensembl chr 8:66,176,376...66,178,464 		JBrowse link
G CRP C-reactive protein ISO RGD PMID:22404382 RGD:6903321 NCBI chr 1:159,712,289...159,714,589
Ensembl chr 1:159,712,289...159,714,589 		JBrowse link
G CSF2 colony stimulating factor 2 treatment IDA RGD PMID:15658127 RGD:10449531 NCBI chr 5:132,073,789...132,076,170
Ensembl chr 5:132,073,789...132,076,170 		JBrowse link
G CSF3 colony stimulating factor 3 treatment IDA RGD PMID:21953623 RGD:10450511 NCBI chr17:40,015,440...40,017,813
Ensembl chr17:40,015,361...40,017,813 		JBrowse link
G CSPG4 chondroitin sulfate proteoglycan 4 ISO
IEP		 RGD PMID:22243800 PMID:19604403 PMID:22042562 RGD:5686844, RGD:5686859, RGD:5686848 NCBI chr15:75,674,322...75,713,466
Ensembl chr15:75,674,322...75,712,848 		JBrowse link
G CTSS cathepsin S ISO RGD PMID:16344894 RGD:2303423 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957 		JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 ISO RGD PMID:9698165 RGD:5135274 NCBI chr 4:73,869,393...73,871,308
Ensembl chr 4:73,869,393...73,871,308 		JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 ISO RGD PMID:19170890 RGD:2311365 NCBI chr 4:76,021,118...76,023,497
Ensembl chr 4:76,021,118...76,023,497 		JBrowse link
G CYBA cytochrome b-245 alpha chain ISO mRNA:increased expression:spinal cord RGD PMID:16345062 RGD:1599510 NCBI chr16:88,643,289...88,651,053
Ensembl chr16:88,643,275...88,651,083 		JBrowse link
G CYBB cytochrome b-245 beta chain ISO mRNA,protein:increased expression:microglia: RGD PMID:20679217 RGD:11040629 NCBI chr  X:37,780,059...37,813,461
Ensembl chr  X:37,780,018...37,813,461 		JBrowse link
G DAB2 DAB adaptor protein 2 ISO protein:increased expression:spinal cord RGD PMID:17317100 RGD:7243246 NCBI chr 5:39,371,677...39,424,980
Ensembl chr 5:39,371,675...39,462,300 		JBrowse link
G DCC DCC netrin 1 receptor ISO RGD PMID:16998900 RGD:2314373 NCBI chr18:52,340,197...53,535,899
Ensembl chr18:52,340,197...53,535,899 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr12:57,516,588...57,520,517
Ensembl chr12:57,516,588...57,521,737 		JBrowse link
G DUSP1 dual specificity phosphatase 1 treatment ISO protein:decreased expression:spinal cord RGD PMID:18630599 PMID:19383246 RGD:7771572, RGD:7771580 NCBI chr 5:172,768,096...172,771,195
Ensembl chr 5:172,768,096...172,771,195 		JBrowse link
G EFNB2 ephrin B2 ISO mRNA,protein:increased expression:fibroblast, astrocyte
protein:increased phosporylation:spinal cord		 RGD PMID:33794069 PMID:12944508 RGD:127285659, RGD:127285804 NCBI chr13:106,489,745...106,535,662
Ensembl chr13:106,489,745...106,535,662 		JBrowse link
G EGFR epidermal growth factor receptor ISO protein:increased phosphorylation:spinal cord, astrocyte (rat) RGD PMID:20869112 PMID:21402118 RGD:5131525, RGD:5131454 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628 		JBrowse link
G EIF5A eukaryotic translation initiation factor 5A ISO mRNA, protein:increased expression:gastrocnemius RGD PMID:23238062 RGD:10395360 NCBI chr17:7,306,999...7,312,463
Ensembl chr17:7,306,999...7,312,463 		JBrowse link
G ENDOG endonuclease G ISO RGD PMID:16689664 RGD:8655990 NCBI chr 9:128,818,500...128,822,676
Ensembl chr 9:128,818,500...128,822,676 		JBrowse link
G ENO2 enolase 2 ISO protein:increased expression:serum, cerebrospinal fluid RGD PMID:18343116 RGD:2293743 NCBI chr12:6,914,580...6,923,697
Ensembl chr12:6,913,745...6,923,698 		JBrowse link
G ENSA endosulfine alpha ISO mRNA:decreased expression:spinal cord RGD PMID:16344894 RGD:2303423 NCBI chr 1:150,621,246...150,629,612
Ensembl chr 1:150,600,851...150,629,612 		JBrowse link
G EPHA3 EPH receptor A3 ISO RGD PMID:16083359 RGD:2301766 NCBI chr 3:89,107,621...89,482,134
Ensembl chr 3:89,107,621...89,482,134 		JBrowse link
G EPHA4 EPH receptor A4 ISO RGD PMID:17970742 PMID:17418490 PMID:21931787 RGD:5688750, RGD:5688782, RGD:5688764 NCBI chr 2:221,418,027...221,574,202
Ensembl chr 2:221,418,027...221,574,202 		JBrowse link
G EPHA7 EPH receptor A7 ISO mRNA:increased expression:spinal cord RGD PMID:16983667 RGD:2301957 NCBI chr 6:93,240,020...93,419,559
Ensembl chr 6:93,240,020...93,419,687 		JBrowse link
G EPHB2 EPH receptor B2 ameliorates ISO RGD PMID:33794069 PMID:12944508 RGD:127285659, RGD:127285804 NCBI chr 1:22,710,838...22,921,500
Ensembl chr 1:22,710,839...22,921,500 		JBrowse link
G EPO erythropoietin treatment IDA RGD PMID:22196867 RGD:10401074 NCBI chr 7:100,720,468...100,723,700
Ensembl chr 7:100,720,468...100,723,700 		JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO mRNA, protein:increased expression:spinal cord RGD PMID:11797086 RGD:2289967 NCBI chr12:56,080,108...56,103,505
Ensembl chr12:56,076,799...56,103,505 		JBrowse link
G ESR1 estrogen receptor 1 ISO RGD PMID:25105782 RGD:10045844 NCBI chr 6:151,656,672...152,129,619
Ensembl chr 6:151,656,691...152,129,619 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:25105782 RGD:10045844 NCBI chr14:64,226,707...64,338,613
Ensembl chr14:64,084,232...64,338,112 		JBrowse link
G F2 coagulation factor II, thrombin ISO RGD PMID:16344894 RGD:2303423 NCBI chr11:46,719,213...46,739,506
Ensembl chr11:46,719,196...46,739,506 		JBrowse link
G FADD Fas associated via death domain treatment ISO RGD PMID:23574812 RGD:11344882 NCBI chr11:70,203,296...70,207,390
Ensembl chr11:70,203,296...70,207,390 		JBrowse link
G FAS Fas cell surface death receptor ISO protein:increased expression:cervical spinal cord RGD PMID:17703359 PMID:29738767 PMID:17518537 RGD:2290176, RGD:13792580, RGD:2290177 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605 		JBrowse link
G FGF1 fibroblast growth factor 1 IDA
ISO		 Human FGF1 used in rat model of spinal cord injury RGD PMID:21663406 PMID:18482974 PMID:20488178 PMID:8662542 RGD:5509875, RGD:2317692, RGD:5509877, RGD:5509876 NCBI chr 5:142,592,178...142,698,070
Ensembl chr 5:142,592,178...142,698,070 		JBrowse link
G FGF2 fibroblast growth factor 2 treatment ISO RGD PMID:24968269 RGD:40924652 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,682...122,898,236 		JBrowse link
G FIS1 fission, mitochondrial 1 treatment ISO RGD PMID:26079325 RGD:12437066 NCBI chr 7:101,239,472...101,245,081
Ensembl chr 7:101,239,458...101,252,316 		JBrowse link
G FKBP1B FKBP prolyl isomerase 1B ISO RGD PMID:27998200 RGD:329853757 NCBI chr 2:24,033,206...24,063,681
Ensembl chr 2:24,049,701...24,063,681 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO mRNA:increased expression:spinal cord, astrocyte, macrophage RGD PMID:17409380 RGD:5684414 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145 		JBrowse link
G FN1 fibronectin 1 IDA RGD PMID:20347014 RGD:7205459 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073 		JBrowse link
G FOXO3 forkhead box O3 ISO protein:decreased expression:spinal cord,neuron, astrocyte: RGD PMID:22930444 RGD:10402202 NCBI chr 6:108,559,825...108,684,774
Ensembl chr 6:108,559,835...108,684,774 		JBrowse link
G FOXP3 forkhead box P3 treatment ISO RGD PMID:30287503 RGD:38549580 NCBI chr  X:49,250,438...49,264,710
Ensembl chr  X:49,250,438...49,264,800 		JBrowse link
G GAP43 growth associated protein 43 treatment ISO RGD PMID:24968269 RGD:40924652 NCBI chr 3:115,623,510...115,721,483
Ensembl chr 3:115,623,510...115,721,490 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase treatment ISO RGD PMID:27256506 RGD:13792677 NCBI chr12:6,534,517...6,538,371
Ensembl chr12:6,534,512...6,538,374 		JBrowse link
G GDNF glial cell derived neurotrophic factor ISO RGD PMID:22342994 RGD:5688774 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G GFAP glial fibrillary acidic protein treatment ISO protein:increased expression:spinal cord RGD PMID:10225952 PMID:24968269 PMID:21250919 RGD:6480471, RGD:40924652, RGD:6480511 NCBI chr17:44,903,159...44,915,500
Ensembl chr17:44,903,159...44,916,937 		JBrowse link
G GHSR growth hormone secretagogue receptor ISO RGD PMID:25261791 RGD:12907564 NCBI chr 3:172,443,291...172,448,456
Ensembl chr 3:172,443,291...172,448,456 		JBrowse link
G GJA1 gap junction protein alpha 1 treatment ISO RGD PMID:23403365 PMID:24183749 RGD:8662431, RGD:8662460 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727 		JBrowse link
G GJC2 gap junction protein gamma 2 treatment ISO RGD PMID:26415641 RGD:13208513 NCBI chr 1:228,149,930...228,159,826
Ensembl chr 1:228,149,930...228,159,826 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO protein:increased expression:spinal cord (rat) RGD PMID:27150525 RGD:13506243 NCBI chr16:58,707,131...58,734,316
Ensembl chr16:58,707,131...58,734,342 		JBrowse link
G GPER1 G protein-coupled estrogen receptor 1 ISO RGD PMID:22975889 RGD:8552988 NCBI chr 7:1,087,118...1,093,810
Ensembl chr 7:1,082,208...1,093,815 		JBrowse link
G GPX3 glutathione peroxidase 3 ISO protein:increased expression:cerebrospinal fluid RGD PMID:21559420 RGD:40907059 NCBI chr 5:151,020,591...151,028,988
Ensembl chr 5:151,020,591...151,028,988 		JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO protein:increased expression:spinal cord, neuron, microglial cell (rat) RGD PMID:23359120 RGD:13792782 NCBI chr 5:177,425,523...177,442,891
Ensembl chr 5:177,403,204...177,442,901 		JBrowse link
G GRN granulin precursor ISO mRNA, protein:increased expression:spinal cord: RGD PMID:19946692 RGD:5509603 NCBI chr17:44,345,302...44,353,106
Ensembl chr17:44,345,246...44,353,106 		JBrowse link
G GSTA4 glutathione S-transferase alpha 4 ISO mRNA:increased expression:lumbar segment of spinal cord (rat) RGD PMID:22160604 RGD:5687769 NCBI chr 6:52,977,953...52,995,284
Ensembl chr 6:52,977,948...52,995,304 		JBrowse link
G HGF hepatocyte growth factor treatment IDA
ISO		 mRNA,protein:increased expression:spinal cord: RGD PMID:22140459 PMID:17549731 PMID:17549731 RGD:8548666, RGD:2317487, RGD:2317487 NCBI chr 7:81,699,010...81,770,047
Ensembl chr 7:81,699,010...81,770,438 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO
EXP		 protein:increased expression:spinal cord
CTD Direct Evidence: marker/mechanism		 CTD
RGD		 PMID:21092735 PMID:21092735 RGD:5148013 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G HMGB1 high mobility group box 1 ISO mRNA:increased expression:spinal cord RGD PMID:20195207 RGD:2325645 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G HMOX1 heme oxygenase 1 treatment ISO RGD PMID:23943397 RGD:10766443 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,214 		JBrowse link
G HRH3 histamine receptor H3 ISO RGD PMID:16671478 RGD:1626425 NCBI chr20:62,214,960...62,220,278
Ensembl chr20:62,214,960...62,220,278 		JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO protein:decreased expression:spinal cord (rat) RGD PMID:24499940 RGD:10445836 NCBI chr 6:44,246,194...44,253,883
Ensembl chr 6:44,246,166...44,253,888 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO mRNA: increased expression RGD PMID:21933012 RGD:5685666 NCBI chr 9:125,234,853...125,241,343
Ensembl chr 9:125,234,853...125,241,382 		JBrowse link
G HSPB1 heat shock protein family B (small) member 1 treatment ISO mRNA,protein:increased expression:spinal cord: RGD PMID:12098653 PMID:30287503 RGD:10402749, RGD:38549580 NCBI chr 7:76,302,673...76,304,292
Ensembl chr 7:76,302,673...76,304,295 		JBrowse link
G ICAM1 intercellular adhesion molecule 1 treatment ISO RGD PMID:8627308 RGD:11522712 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615 		JBrowse link
G ID1 inhibitor of DNA binding 1 ISO mRNA:increased expression:spinal cord (rat) RGD PMID:11746449 RGD:9686138 NCBI chr20:31,605,289...31,606,510
Ensembl chr20:31,605,283...31,606,515 		JBrowse link
G ID2 inhibitor of DNA binding 2 ISO mRNA:increased expression:spinal cord (rat) RGD PMID:11746449 RGD:9686138 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461 		JBrowse link
G ID3 inhibitor of DNA binding 3 ISO mRNA:increased expression:spinal cord (rat) RGD PMID:11746449 RGD:9686138 NCBI chr 1:23,557,926...23,559,501
Ensembl chr 1:23,557,926...23,559,501 		JBrowse link
G IFNB1 interferon beta 1 ameliorates IDA
ISO		 RGD PMID:17426631 PMID:20109445 RGD:401854235, RGD:401854241 NCBI chr 9:21,077,104...21,077,942
Ensembl chr 9:21,077,104...21,077,942 		JBrowse link
G IL10 interleukin 10 treatment ISO RGD PMID:29691718 RGD:14975124 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541 		JBrowse link
G IL18 interleukin 18 treatment ISO RGD PMID:18367607 PMID:23140983 RGD:2315889, RGD:8655974 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,253...112,164,096 		JBrowse link
G IL1B interleukin 1 beta treatment ISO mRNA, protein:increased expression:spinal cord RGD PMID:16038625 PMID:29691718 PMID:23209732 RGD:1626673, RGD:14975124, RGD:7175523 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816 		JBrowse link
G IL1R1 interleukin 1 receptor type 1 ISO mRNA,protein:increased expression:spinal cord RGD PMID:16456668 RGD:7207035 NCBI chr 2:102,070,390...102,179,874
Ensembl chr 2:102,064,544...102,179,874 		JBrowse link
G IL1RN interleukin 1 receptor antagonist ISO
IEP		 protein:increased expression:serum (human) RGD PMID:16038625 PMID:17964877 RGD:1626673, RGD:6907102 NCBI chr 2:113,099,360...113,134,014
Ensembl chr 2:113,099,315...113,134,016 		JBrowse link
G IL4 interleukin 4 ISO RGD PMID:20623539 RGD:5128562 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678 		JBrowse link
G IL4R interleukin 4 receptor ISO mRNA:increased expression:spinal cord RGD PMID:20623539 RGD:5128562 NCBI chr16:27,313,756...27,364,778
Ensembl chr16:27,313,668...27,364,778 		JBrowse link
G IL6 interleukin 6 treatment ISO RGD PMID:27085942 PMID:29691718 RGD:11062150, RGD:14975124 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002 		JBrowse link
G IRF1 interferon regulatory factor 1 ISO RGD PMID:11723173 RGD:2298928 NCBI chr 5:132,481,609...132,490,773
Ensembl chr 5:132,440,440...132,508,719 		JBrowse link
G IRF5 interferon regulatory factor 5 treatment ISO RGD PMID:24968269 RGD:40924652 NCBI chr 7:128,937,032...128,950,038
Ensembl chr 7:128,937,457...128,950,038 		JBrowse link
G ITIH4 inter-alpha-trypsin inhibitor heavy chain 4 severity ISO protein:decreased expression:cerebrospinal fluid RGD PMID:21559420 RGD:40907059 NCBI chr 3:52,812,962...52,830,672
Ensembl chr 3:52,812,962...52,830,688 		JBrowse link
G JAK2 Janus kinase 2 treatment ISO RGD PMID:23274522 RGD:10411896 NCBI chr 9:4,984,390...5,129,948
Ensembl chr 9:4,984,390...5,129,948 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO protein:increased phosphorylation:neuron RGD PMID:21132399 RGD:4889994 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048 		JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 ISO protein:decreased expression:spinal cord RGD PMID:20375134 RGD:8662905 NCBI chr 1:160,037,467...160,070,160
Ensembl chr 1:159,998,651...160,070,160 		JBrowse link
G KCNK2 potassium two pore domain channel subfamily K member 2 treatment ISO RGD PMID:22425721 RGD:9831183 NCBI chr 1:215,005,542...215,237,090
Ensembl chr 1:215,005,775...215,237,090 		JBrowse link
G KCNN4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:24606313 RGD:329955563 NCBI chr19:43,766,533...43,780,973
Ensembl chr19:43,766,533...43,780,976 		JBrowse link
G KDM6B lysine demethylase 6B ISO mRNA:increased expression:spinal cord (rat) RGD PMID:22578249 RGD:9587821 NCBI chr17:7,834,217...7,854,796
Ensembl chr17:7,834,217...7,854,796 		JBrowse link
G KDR kinase insert domain receptor ISO mRNA:increased expression:spinal cord, astrocyte, macrophage RGD PMID:17409380 RGD:5684414 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595 		JBrowse link
G KIF3B kinesin family member 3B ISO protein:increased expression:spinal cord RGD PMID:23093447 RGD:11049594 NCBI chr20:32,277,651...32,335,011
Ensembl chr20:32,277,651...32,335,011 		JBrowse link
G KLK6 kallikrein related peptidase 6 IEP protein:increased expression:spinal cord RGD PMID:16987227 RGD:2314866 NCBI chr19:50,958,631...50,969,591
Ensembl chr19:50,958,631...50,969,673 		JBrowse link
G KMO kynurenine 3-monooxygenase ISO mRNA,protein:increased expression:spinal cord: RGD PMID:26524415 RGD:13703043 NCBI chr 1:241,532,378...241,595,642
Ensembl chr 1:241,532,134...241,595,642 		JBrowse link
G LEP leptin ISO RGD PMID:19777863 RGD:5128780 NCBI chr 7:128,241,278...128,257,629
Ensembl chr 7:128,241,278...128,257,629 		JBrowse link
G LRP1 LDL receptor related protein 1 treatment ISO RGD PMID:23867460 RGD:13800520 NCBI chr12:57,128,483...57,213,361
Ensembl chr12:57,128,483...57,213,361 		JBrowse link
G LRP5 LDL receptor related protein 5 treatment ISO RGD PMID:24090150 RGD:12798566 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275 		JBrowse link
G LUM lumican ISO protein:increased expression:spinal cord RGD PMID:18482974 RGD:2317692 NCBI chr12:91,102,629...91,111,494
Ensembl chr12:91,102,629...91,111,494 		JBrowse link
G MAP1B microtubule associated protein 1B ISO protein:increased phosphorylation:spinal cord, neuron RGD PMID:17880387 RGD:2304007 NCBI chr 5:72,107,475...72,209,565
Ensembl chr 5:72,107,234...72,209,565 		JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha treatment ISO protein:increased expression:spinal cord RGD PMID:24559459 PMID:23637053 PMID:23852559 RGD:11561918, RGD:11564330, RGD:11561922 NCBI chr20:34,546,844...34,560,345
Ensembl chr20:34,546,854...34,560,345 		JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr16:87,392,336...87,404,774
Ensembl chr16:87,383,953...87,404,779 		JBrowse link
G MAP2 microtubule associated protein 2 ISO RGD PMID:21704982 RGD:6483323 NCBI chr 2:209,424,047...209,734,112
Ensembl chr 2:209,424,047...209,734,147 		JBrowse link
G MAP3K5 mitogen-activated protein kinase kinase kinase 5 ISO protein:increased expression:white matter and grey matter: RGD PMID:10331432 RGD:10412645 NCBI chr 6:136,557,046...136,793,091
Ensembl chr 6:136,557,046...136,793,097 		JBrowse link
G MAPT microtubule associated protein tau treatment ISO RGD PMID:22052241 RGD:8158113 NCBI chr17:45,894,554...46,028,334
Ensembl chr17:45,894,527...46,028,334 		JBrowse link
G MDM2 MDM2 proto-oncogene ISO protein:increased expression:spinal cord RGD PMID:23595775 RGD:10412063 NCBI chr12:68,808,172...68,850,686
Ensembl chr12:68,808,177...68,845,544 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO mRNA, protein:increased expression:spinal cord (rat) RGD PMID:17549731 RGD:2317487 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377 		JBrowse link
G MFN1 mitofusin 1 treatment ISO protein:altered expression:spinal cord, mitochondrion (rat) RGD PMID:26981103 PMID:26079325 RGD:12910837, RGD:12437066 NCBI chr 3:179,347,709...179,394,936
Ensembl chr 3:179,347,709...179,394,936 		JBrowse link
G MFN2 mitofusin 2 treatment ISO protein:increased expression:spinal cord (rat) RGD PMID:28404953 PMID:26079325 RGD:12910735, RGD:12437066 NCBI chr 1:11,980,444...12,013,508
Ensembl chr 1:11,980,181...12,015,211 		JBrowse link
G MIF macrophage migration inhibitory factor ISO mRNA:increased expression:spinal cord, microglial cell RGD PMID:15067555 RGD:1641997 NCBI chr22:23,894,383...23,895,223
Ensembl chr22:23,894,383...23,895,227 		JBrowse link
G MIR21 microRNA 21 exacerbates ISO RGD PMID:31102912 RGD:41410823 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337 		JBrowse link
G MIR214 microRNA 214 treatment ISO RGD PMID:30287503 RGD:38549580 NCBI chr 1:172,138,798...172,138,907
Ensembl chr 1:172,138,798...172,138,907 		JBrowse link
G MIR411 microRNA 411 ISO RGD PMID:29738767 RGD:13792580 NCBI chr14:101,023,325...101,023,420
Ensembl chr14:101,023,325...101,023,420 		JBrowse link
G MIR494 microRNA 494 ameliorates ISO RGD PMID:28601045 RGD:156420142 NCBI chr14:101,029,634...101,029,714
Ensembl chr14:101,029,634...101,029,714 		JBrowse link
G MMP2 matrix metallopeptidase 2 treatment ISO RGD PMID:24436993 RGD:8657106 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691 		JBrowse link
G MMP9 matrix metallopeptidase 9 treatment ISO RGD PMID:25763638 RGD:12791993 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561 		JBrowse link
G MPO myeloperoxidase ISO protein:increased activity:spinal cord RGD PMID:22986158 RGD:6909148 NCBI chr17:58,269,855...58,280,935
Ensembl chr17:58,269,855...58,280,935 		JBrowse link
G MRC1 mannose receptor C-type 1 treatment ISO RGD PMID:24968269 RGD:40924652 NCBI chr10:17,809,348...17,911,164
Ensembl chr10:17,809,348...17,911,164 		JBrowse link
G MT-ND3 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 ISO RGD PMID:20438613 RGD:5687694 NCBI chr MT:10,059...10,404
Ensembl chr MT:10,059...10,404 		JBrowse link
G MTOR mechanistic target of rapamycin kinase treatment ISO RGD PMID:20678995 RGD:10040962 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556 		JBrowse link
G MYRF myelin regulatory factor ameliorates ISO RGD PMID:27370227 RGD:213230157 NCBI chr11:61,752,636...61,788,518
Ensembl chr11:61,752,636...61,788,518 		JBrowse link
G NAPEPLD N-acyl phosphatidylethanolamine phospholipase D ISO mRNA:increased expression:spinal cord RGD PMID:18930143 RGD:2316199 NCBI chr 7:103,099,776...103,150,001
Ensembl chr 7:103,099,776...103,149,560 		JBrowse link
G NCAM1 neural cell adhesion molecule 1 treatment IMP RGD PMID:28529158 RGD:40924632 NCBI chr11:112,961,420...113,278,436
Ensembl chr11:112,961,275...113,278,436 		JBrowse link
G NCF2 neutrophil cytosolic factor 2 ISO protein:increased expression:spinal cord RGD PMID:14644473 RGD:2314450 NCBI chr 1:183,555,562...183,601,849
Ensembl chr 1:183,554,461...183,590,905 		JBrowse link
G NEFH neurofilament heavy chain treatment ISO RGD PMID:18772508 PMID:32168135 RGD:9698443, RGD:27226888 NCBI chr22:29,480,218...29,491,390
Ensembl chr22:29,480,218...29,491,390 		JBrowse link
G NEFL neurofilament light chain treatment ISO RGD PMID:18772508 RGD:9698443 NCBI chr 8:24,950,955...24,956,612
Ensembl chr 8:24,950,955...24,956,721 		JBrowse link
G NEFM neurofilament medium chain treatment ISO RGD PMID:18772508 RGD:9698443 NCBI chr 8:24,913,761...24,919,093
Ensembl chr 8:24,913,758...24,919,098 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 treatment ISO RGD PMID:24747453 RGD:10412730 NCBI chr 2:177,230,303...177,264,727
Ensembl chr 2:177,218,667...177,392,756 		JBrowse link
G NFKBIA NFKB inhibitor alpha treatment ISO RGD PMID:21134362 RGD:10413867 NCBI chr14:35,401,513...35,404,749
Ensembl chr14:35,401,079...35,404,749 		JBrowse link
G NGF nerve growth factor ISO RGD PMID:16915089 PMID:12499054 RGD:5144069, RGD:5144073 NCBI chr 1:115,285,917...115,338,249
Ensembl chr 1:115,285,904...115,338,770 		JBrowse link
G NGFR nerve growth factor receptor treatment ISO mRNA:increased expression:spinal cord RGD PMID:11223160 PMID:23748892 RGD:5144100, RGD:10414079 NCBI chr17:49,495,293...49,515,008
Ensembl chr17:49,495,293...49,515,008 		JBrowse link
G NKX6-1 NK6 homeobox 1 ISO RGD PMID:18687784 RGD:2311166 NCBI chr 4:84,491,985...84,499,292
Ensembl chr 4:84,491,985...84,499,292 		JBrowse link
G NLK nemo like kinase ISO protein:increased expression:grey matter: RGD PMID:24395089 RGD:12791278 NCBI chr17:28,042,677...28,206,074
Ensembl chr17:28,041,737...28,196,381 		JBrowse link
G NOG noggin treatment ISO RGD PMID:18221366 RGD:10429192 NCBI chr17:56,593,699...56,595,611
Ensembl chr17:56,593,699...56,595,611 		JBrowse link
G NOS1 nitric oxide synthase 1 ISO protein:increased expression:spinal cord RGD PMID:20633123 PMID:19291395 RGD:5131936, RGD:5132595 NCBI chr12:117,208,142...117,361,626
Ensembl chr12:117,208,142...117,452,170 		JBrowse link
G NOS2 nitric oxide synthase 2 ISO mRNA:altered expression:thoracic aorta RGD PMID:17287083 RGD:4891407 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529 		JBrowse link
G NOS3 nitric oxide synthase 3 ISO RGD PMID:17287083 RGD:4891407 NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588 		JBrowse link
G NOX4 NADPH oxidase 4 ISO mRNA,protein:increased expression:gastrocnemius muscle RGD PMID:27998200 RGD:329853757 NCBI chr11:89,324,353...89,589,557
Ensembl chr11:89,324,353...89,498,187 		JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 treatment ISO protein:increased expression:spinal cord (rat) RGD PMID:24747453 PMID:28881715 RGD:10412730, RGD:13434916 NCBI chr16:69,709,401...69,726,560
Ensembl chr16:69,706,996...69,726,668 		JBrowse link
G NRG1 neuregulin 1 exacerbates ISO RGD PMID:26993800 RGD:11056189 NCBI chr 8:31,639,245...32,774,046
Ensembl chr 8:31,639,222...32,855,666 		JBrowse link
G NTF3 neurotrophin 3 IMP RGD PMID:16022868 RGD:4891112 NCBI chr12:5,430,332...5,495,299
Ensembl chr12:5,432,108...5,521,536 		JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 ISO mRNA:decreased expression:spinal cord RGD PMID:18585435 RGD:2308892 NCBI chr 1:156,815,750...156,881,850
Ensembl chr 1:156,815,636...156,881,850 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 ISO RGD PMID:22027236 PMID:20597685 RGD:5684547, RGD:5684898 NCBI chr 9:84,668,522...85,027,054
Ensembl chr 9:84,668,375...85,095,751 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 ISO mRNA:decreased expression:spinal cord RGD PMID:18585435 RGD:2308892 NCBI chr15:87,859,751...88,256,739
Ensembl chr15:87,859,751...88,256,791 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 treatment ISO RGD PMID:28452182 PMID:22173726 RGD:40902836, RGD:40902844 NCBI chr21:33,025,935...33,029,185
Ensembl chr21:33,025,935...33,029,196 		JBrowse link
G P2RX7 purinergic receptor P2X 7 EXP CTD Direct Evidence: therapeutic CTD PMID:15258577 NCBI chr12:121,132,876...121,188,032
Ensembl chr12:121,132,819...121,188,032 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO
EXP		 CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:15696051 PMID:21748659 RGD:10053608 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
G PDCD1 programmed cell death 1 treatment ISO RGD PMID:29665726 RGD:40886268 NCBI chr 2:241,849,884...241,858,894
Ensembl chr 2:241,849,884...241,858,894 		JBrowse link
G PDCD1LG2 programmed cell death 1 ligand 2 ISO mRNA:increased expression:microglial cell RGD PMID:29665726 RGD:40886268 NCBI chr 9:5,510,531...5,571,282
Ensembl chr 9:5,510,531...5,571,282 		JBrowse link
G PDGFB platelet derived growth factor subunit B ISO RGD PMID:21568693 RGD:6482306 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982 		JBrowse link
G PLA2G2A phospholipase A2 group IIA ISO protein:increased expression:spinal cord RGD PMID:21868473 PMID:19306380 RGD:6482718, RGD:6482721 NCBI chr 1:19,975,431...19,980,434
Ensembl chr 1:19,975,431...19,980,416 		JBrowse link
G PLA2G6 phospholipase A2 group VI ISO protein:increased expression:spinal cord RGD PMID:21868473 RGD:6482718 NCBI chr22:38,111,495...38,181,830
Ensembl chr22:38,111,495...38,214,778 		JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:21573723 RGD:6483797 NCBI chr10:73,909,164...73,917,494
Ensembl chr10:73,909,177...73,917,496 		JBrowse link
G PLAUR plasminogen activator, urokinase receptor ISO RGD PMID:21573723 RGD:6483797 NCBI chr19:43,646,095...43,670,169
Ensembl chr19:43,646,095...43,670,547 		JBrowse link
G PON1 paraoxonase 1 treatment ISO RGD PMID:12897486 RGD:8547682 NCBI chr 7:95,297,676...95,324,532
Ensembl chr 7:95,297,676...95,324,532 		JBrowse link
G PPARD peroxisome proliferator activated receptor delta ISO RGD PMID:20058304 RGD:2324875 NCBI chr 6:35,342,558...35,428,178
Ensembl chr 6:35,342,558...35,428,191 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:22208735 RGD:6484263 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089 		JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma ISO protein:increased expression:spinal cord, astrocyte, microglial cell RGD PMID:29033188 RGD:13514047 NCBI chr12:110,708,376...110,742,891
Ensembl chr12:110,719,680...110,742,939 		JBrowse link
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO
EXP		 mRNA:increased expression:spinal cord (rat)
CTD Direct Evidence: marker/mechanism		 CTD
RGD		 PMID:29793971 PMID:17578450 RGD:9999410 NCBI chr19:48,872,421...48,876,058
Ensembl chr19:48,872,212...48,876,059 		JBrowse link
G PRKCG protein kinase C gamma ISO protein:decreased expression:spinal cord (mouse) RGD PMID:10501452 RGD:28867228 NCBI chr19:53,881,094...53,907,652
Ensembl chr19:53,879,190...53,907,652 		JBrowse link
G PTEN phosphatase and tensin homolog ISO mRNA:increased expression:spinal cord: RGD PMID:28601045 RGD:156420142 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,862,638...87,971,930 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 ISO protein:increased expression:microglia, macrophage RGD PMID:17184185 PMID:11063829 RGD:5688221, RGD:5688246 NCBI chr 9:122,370,533...122,395,703
Ensembl chr 9:122,370,530...122,395,703 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18606213 RGD:5135219 NCBI chr 1:186,671,791...186,680,423
Ensembl chr 1:186,671,791...186,680,922 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 treatment ISO RGD PMID:15016081 PMID:18065151 PMID:12895450 RGD:9589823, RGD:9590124, RGD:9590113 NCBI chr 7:121,873,161...122,062,036
Ensembl chr 7:121,873,089...122,062,036 		JBrowse link
G RAD21 RAD21 cohesin complex component treatment ISO RGD PMID:33741460 RGD:243065262 NCBI chr 8:116,845,934...116,874,776
Ensembl chr 8:116,845,934...116,874,776 		JBrowse link
G RARA retinoic acid receptor alpha ISO RGD PMID:16420438 RGD:2314291 NCBI chr17:40,309,180...40,357,643
Ensembl chr17:40,309,180...40,357,643 		JBrowse link
G RBMX RNA binding motif protein X-linked ISO RGD PMID:23180094 RGD:10053723 NCBI chr  X:136,869,192...136,880,725
Ensembl chr  X:136,848,004...136,880,764 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit ISO RGD PMID:17918744 RGD:2298849 NCBI chr11:65,653,601...65,663,857
Ensembl chr11:65,653,599...65,663,090 		JBrowse link
G RGMA repulsive guidance molecule BMP co-receptor a treatment ISO RGD PMID:16585268 RGD:9850138 NCBI chr15:93,035,271...93,089,211
Ensembl chr15:93,035,271...93,089,211 		JBrowse link
G RHOA ras homolog family member A ISO mRNA,protein:increased expression:spinal cord: RGD PMID:27893610 RGD:243048440 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998 		JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO mRNA,protein:increased expression:spinal cord: RGD PMID:27893610 RGD:243048440 NCBI chr 3:78,597,239...79,767,998
Ensembl chr 3:78,597,239...79,767,998 		JBrowse link
G RPSA ribosomal protein SA ISO RGD PMID:19196078 RGD:11041651 NCBI chr 3:39,406,720...39,412,542
Ensembl chr 3:39,406,716...39,426,255 		JBrowse link
G RYR1 ryanodine receptor 1 ISO protein:hyperoxidation,hypernitrosylation:gastrocnemius muscle RGD PMID:27998200 RGD:329853757 NCBI chr19:38,433,691...38,587,564
Ensembl chr19:38,433,691...38,595,273 		JBrowse link
G SCN3A sodium voltage-gated channel alpha subunit 3 ISO RGD PMID:16109750 PMID:16718433 RGD:2317320 RGD:2317321 NCBI chr 2:165,087,526...165,204,050
Ensembl chr 2:165,087,526...165,204,050 		JBrowse link
G SERPINC1 serpin family C member 1 treatment IDA RGD PMID:15792522 RGD:1599333 NCBI chr 1:173,903,800...173,917,327
Ensembl chr 1:173,903,800...173,917,327 		JBrowse link
G SHH sonic hedgehog signaling molecule treatment ISO RGD PMID:24837681 RGD:12879409 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463 		JBrowse link
G SIAH1 siah E3 ubiquitin protein ligase 1 treatment ISO RGD PMID:27256506 RGD:13792677 NCBI chr16:48,360,531...48,387,246
Ensembl chr16:48,356,364...48,448,402 		JBrowse link
G SLC25A27 solute carrier family 25 member 27 ISO protein:increased expression:spinal cord RGD PMID:18534681 RGD:6482843 NCBI chr 6:46,652,975...46,678,190
Ensembl chr 6:46,652,915...46,678,190 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO protein:increased expression:spinal cord RGD PMID:19388351 RGD:151361131 NCBI chr16:87,830,023...87,869,507
Ensembl chr16:87,830,023...87,869,507 		JBrowse link
G SLIT1 slit guidance ligand 1 ISO RGD PMID:16262652 RGD:2316136 NCBI chr10:96,998,038...97,185,959
Ensembl chr10:96,998,038...97,185,959 		JBrowse link
G SLIT2 slit guidance ligand 2 ISO mRNA, protein:increased expression:spinal cord
mRNA,protein:decreased expression:spinal cord:		 RGD PMID:19783284 PMID:27893610 RGD:2316127, RGD:243048440 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561 		JBrowse link
G SLIT3 slit guidance ligand 3 ISO RGD PMID:16262652 RGD:2316136 NCBI chr 5:168,661,740...169,301,139
Ensembl chr 5:168,661,740...169,301,139 		JBrowse link
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 ISO protein:increased expression:spinal cord RGD PMID:23595775 RGD:10412063 NCBI chr 7:99,027,440...99,144,108
Ensembl chr 7:99,027,440...99,144,108 		JBrowse link
G SOCS2 suppressor of cytokine signaling 2 ISO RGD PMID:11723173 RGD:2298928 NCBI chr12:93,569,969...93,626,236
Ensembl chr12:93,569,814...93,583,487 		JBrowse link
G SOD1 superoxide dismutase 1 treatment IDA
EXP
IMP		 human protein in a rat model
CTD Direct Evidence: therapeutic
human gene in a rat model		 CTD
RGD		 PMID:17457363 PMID:18722523 PMID:16689664 RGD:8655939, RGD:8655990 NCBI chr21:31,659,693...31,668,931
Ensembl chr21:31,659,666...31,668,931 		JBrowse link
G SOX2 SRY-box transcription factor 2 ISO mRNA, protein:increased expression:spinal cord RGD PMID:23169458 RGD:8661675 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436 		JBrowse link
G SPARC secreted protein acidic and cysteine rich ISO RGD PMID:17611274 RGD:2300052 NCBI chr 5:151,661,096...151,686,915
Ensembl chr 5:151,661,096...151,686,975 		JBrowse link
G SPP1 secreted phosphoprotein 1 ISO RGD PMID:15592854 RGD:6483848 NCBI chr 4:87,975,714...87,983,411
Ensembl chr 4:87,975,667...87,983,532 		JBrowse link
G SQSTM1 sequestosome 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr 5:179,806,393...179,838,078
Ensembl chr 5:179,806,398...179,838,078 		JBrowse link
G TACR1 tachykinin receptor 1 ISO RGD PMID:18945947 RGD:2304258 NCBI chr 2:75,046,463...75,199,520
Ensembl chr 2:75,046,463...75,199,520 		JBrowse link
G TBP TATA-box binding protein ISO protein:increased expression:spinal cord, astrocyte, microglial cell RGD PMID:24710803 RGD:9681729 NCBI chr 6:170,554,369...170,572,859
Ensembl chr 6:170,554,302...170,572,870 		JBrowse link
G TERT telomerase reverse transcriptase IDA
ISO		 mRNA, protein:increased expression:spinal cord RGD PMID:15798365 PMID:23793903 RGD:2291993, RGD:11038671 NCBI chr 5:1,253,167...1,295,068
Ensembl chr 5:1,253,147...1,295,068 		JBrowse link
G TGFB1 transforming growth factor beta 1 ISO RGD PMID:15145083 RGD:2302103 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:15145083 RGD:2302103 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619 		JBrowse link
G THBD thrombomodulin IDA RGD PMID:15307903 RGD:1580060 NCBI chr20:23,045,633...23,049,672
Ensembl chr20:23,045,633...23,049,672 		JBrowse link
G THBS1 thrombospondin 1 ISO protein:increased expression:spinal cord RGD PMID:19719963 RGD:2317939 NCBI chr15:39,581,079...39,599,466
Ensembl chr15:39,581,079...39,599,466 		JBrowse link
G TLR1 toll like receptor 1 treatment ISO mRNA:increased expression:spinal cord (mouse) RGD PMID:21970496 PMID:21970496 RGD:7246886, RGD:7246886 NCBI chr 4:38,787,569...38,805,644
Ensembl chr 4:38,790,677...38,856,817 		JBrowse link
G TLR4 toll like receptor 4 severity ISO RGD PMID:25990044 RGD:14700556 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735 		JBrowse link
G TNC tenascin C ISO mRNA:increased expression:spinal cord RGD PMID:11085900 RGD:4889619 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207 		JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:20633123 RGD:5131936 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO protein:increased expression:cerebrospinal fluid RGD PMID:16083358 RGD:1624185 NCBI chr12:6,328,771...6,342,076
Ensembl chr12:6,328,757...6,342,114 		JBrowse link
G TP53 tumor protein p53 ISO protein:increased expression:spinal cord RGD PMID:23595775 RGD:10412063 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G TRAF7 TNF receptor associated factor 7 ISO mRNA, protein:increased expression:spinal cord RGD PMID:30100091 RGD:151356968 NCBI chr16:2,155,782...2,178,129
Ensembl chr16:2,155,698...2,178,129 		JBrowse link
G TRPA1 transient receptor potential cation channel subfamily A member 1 ISO mRNA,protein:increased expression:urinary bladder, dorsal root ganglion: RGD PMID:21367919 RGD:10043365 NCBI chr 8:72,021,250...72,090,010
Ensembl chr 8:72,019,917...72,075,584 		JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 treatment ISO RGD PMID:19169264 PMID:25763638 RGD:10003030, RGD:12791993 NCBI chr19:49,157,792...49,211,836
Ensembl chr19:49,157,741...49,211,836 		JBrowse link
G TUG1 taurine up-regulated 1 treatment ISO RGD PMID:30287503 RGD:38549580 NCBI chr22:30,969,265...30,979,395
Ensembl chr22:30,969,245...30,979,395 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 ISO protein:increased expression:neuron, axon RGD PMID:25040536 RGD:11553820 NCBI chr12:131,894,622...131,923,150
Ensembl chr12:131,894,622...131,923,150 		JBrowse link
G VEGFA vascular endothelial growth factor A ISO
EXP		 protein:increased expression:spinal cord
CTD Direct Evidence: marker/mechanism		 CTD
RGD		 PMID:21092735 PMID:21092735 RGD:5148013 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor ISO RGD PMID:20125055 RGD:2325181 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,667 		JBrowse link
G VIM vimentin ISO protein:increased expression:spinal cord RGD PMID:10225952 PMID:21250919 RGD:6480471, RGD:6480511 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593 		JBrowse link
G VWF von Willebrand factor ISO RGD PMID:25771801 RGD:13673888 NCBI chr12:5,948,877...6,124,670
Ensembl chr12:5,948,877...6,124,770 		JBrowse link
G XBP1 X-box binding protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29793971 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597 		JBrowse link
G XDH xanthine dehydrogenase ISO protein:increased expression:spinal cord RGD PMID:1649310 RGD:13209021 NCBI chr 2:31,334,321...31,414,742
Ensembl chr 2:31,334,321...31,414,742 		JBrowse link
G XYLT1 xylosyltransferase 1 ISO RGD PMID:18765417 RGD:2313145 NCBI chr16:17,101,769...17,470,960
Ensembl chr16:17,101,769...17,470,960 		JBrowse link
Spinal Cord Compression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO mRNA, protein:increased expression, increased activity:spinal cord (rat) RGD PMID:22425718 RGD:10449098 NCBI chr 9:133,414,337...133,459,386
Ensembl chr 9:133,414,358...133,459,402 		JBrowse link
G AMIGO3 adhesion molecule with Ig like domain 3 ISO mRNA, protein:increased expression:dorsal root ganglion (rat) RGD PMID:23613963 RGD:14390159 NCBI chr 3:49,716,829...49,719,684
Ensembl chr 3:49,716,829...49,719,684 		JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO
EXP		 mRNA, protein:increased expression:liver, serum (rat)
CTD Direct Evidence: marker/mechanism		 CTD
RGD		 PMID:15135227 PMID:15855648 RGD:11526154 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208 		JBrowse link
G CD163 CD163 molecule disease_progression ISO protein:increased expression:gray matter of spinal cord, white matter of spinal cord (rat) RGD PMID:23775900 RGD:149735576 NCBI chr12:7,470,811...7,503,777
Ensembl chr12:7,470,811...7,503,893 		JBrowse link
G CHST14 carbohydrate sulfotransferase 14 exacerbates ISO RGD PMID:26586562 RGD:155663489 NCBI chr15:40,470,984...40,473,158
Ensembl chr15:40,470,984...40,473,158 		JBrowse link
G EGR1 early growth response 1 ISO protein:increased expression:spinal cord dorsal horn (rat) RGD PMID:20675054 RGD:5131876 NCBI chr 5:138,465,479...138,469,303
Ensembl chr 5:138,465,479...138,469,303 		JBrowse link
G ELANE elastase, neutrophil expressed treatment ISO RGD PMID:9675307 RGD:10450552 NCBI chr19:852,303...856,243
Ensembl chr19:851,014...856,247 		JBrowse link
G EPO erythropoietin ISO protein:increased expression:neuron, endothelium, glia: RGD PMID:15792521 RGD:11041719 NCBI chr 7:100,720,468...100,723,700
Ensembl chr 7:100,720,468...100,723,700 		JBrowse link
G EPOR erythropoietin receptor ISO protein:increased expression:neuron, endothelium, glia: RGD PMID:15792521 RGD:11041719 NCBI chr19:11,377,207...11,384,314
Ensembl chr19:11,377,207...11,384,342 		JBrowse link
G FAS Fas cell surface death receptor treatment IDA
IEP
ISO		 human protein in a rat model
protein:increased expression:spinal cord:		 RGD PMID:16689665 PMID:21490053 PMID:16202410 RGD:1582444, RGD:12904017, RGD:8663485 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605 		JBrowse link
G FASLG Fas ligand treatment IEP
ISO		 protein:increased expression:spinal cord: RGD PMID:21490053 PMID:21490053 RGD:12904017, RGD:12904017 NCBI chr 1:172,659,103...172,666,876
Ensembl chr 1:172,659,103...172,666,876 		JBrowse link
G FGF2 fibroblast growth factor 2 ISO protein:increased expression:spinal cord RGD PMID:17244329 RGD:8655633 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,682...122,898,236 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO protein:increased expression:spinal cord (rat) RGD PMID:28981091 RGD:155782905 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458 		JBrowse link
G FIS1 fission, mitochondrial 1 treatment ISO RGD PMID:25595990 RGD:12437079 NCBI chr 7:101,239,472...101,245,081
Ensembl chr 7:101,239,458...101,252,316 		JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO protein:decreased expression:spinal cord, thoracic vertebrae (rat) RGD PMID:20399821 RGD:2326108 NCBI chr 5:43,287,470...43,313,412
Ensembl chr 5:43,287,470...43,313,512 		JBrowse link
G HSPA4 heat shock protein family A (Hsp70) member 4 ISO protein:increased expression:spinal cord (mouse) RGD PMID:21787762 RGD:6218959 NCBI chr 5:133,052,013...133,106,449
Ensembl chr 5:133,052,013...133,106,449 		JBrowse link
G IL6 interleukin 6 ISO protein:increased expression:cerebrospinal fluid, serum RGD PMID:30327453 RGD:14975119 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002 		JBrowse link
G ITGAM integrin subunit alpha M treatment ISO RGD PMID:19457130 RGD:329902059 NCBI chr16:31,259,975...31,332,877
Ensembl chr16:31,259,967...31,332,892 		JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:21671795 RGD:6483029 NCBI chr  X:153,861,514...153,886,173
Ensembl chr  X:153,861,514...153,886,173 		JBrowse link
G MIR17 microRNA 17 treatment ISO RGD PMID:31115018 RGD:329403058 NCBI chr13:91,350,605...91,350,688
Ensembl chr13:91,350,605...91,350,688 		JBrowse link
G MT2A metallothionein 2A ISO mRNA:increased expression:spinal cord (mouse) RGD PMID:15592854 RGD:6483848 NCBI chr16:56,608,584...56,609,497
Ensembl chr16:56,608,584...56,609,497 		JBrowse link
G NOS3 nitric oxide synthase 3 treatment ISO RGD PMID:29323048 RGD:13504709 NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588 		JBrowse link
G PLAT plasminogen activator, tissue type EXP CTD Direct Evidence: marker/mechanism CTD PMID:12227717 NCBI chr 8:42,174,718...42,207,565
Ensembl chr 8:42,174,718...42,207,709 		JBrowse link
G TNF tumor necrosis factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:15135227 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO protein:increased expression:spinal cord (rat) RGD PMID:21224756 RGD:5130917 NCBI chr12:6,328,771...6,342,076
Ensembl chr12:6,328,757...6,342,114 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B IMP
ISO		 human protein in rat model
protein:increased expression:spinal cord (rat)		 RGD PMID:21224756 PMID:21224756 RGD:5130917, RGD:5130917 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 41189
    Wounds and Injuries 1007
      Spinal Cord Injuries 287
        Autonomic Dysreflexia 0
        Central Cord Syndrome 0
        Spinal Cord Compression 26
Path 2
Term Annotations click to browse term
  disease 41189
    disease of anatomical entity 32344
      nervous system disease 26233
        central nervous system disease 23468
          spinal cord disease 2507
            Spinal Cord Injuries 287
              Autonomic Dysreflexia 0
              Central Cord Syndrome 0
              Spinal Cord Compression 26
paths to the root