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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:chorioretinitis
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Accession:DOID:8886 term browser browse the term
Definition:Inflammation of the choroid in which the sensory retina becomes edematous and opaque. The inflammatory cells and exudate may burst through the sensory retina to cloud the vitreous body.
Synonyms:exact_synonym: Chorioretinitides;   Choroidoretinitis;   Retinochoroiditis
 primary_id: MESH:D002825
 xref: GARD:6060;   ICD9CM:363.20;   NCI:C110923
For additional species annotation, visit the Alliance of Genome Resources.

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chorioretinitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain ISO associated with Toxoplasmosis, Congenital;DNA:snp:intron:IVS2-218 (rs1793958) (human) RGD PMID:18523590 RGD:8657355 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853 		JBrowse link
birdshot chorioretinopathy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erap2 endoplasmic reticulum aminopeptidase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:36013011 NCBI chrNW_004936523:6,545,281...6,584,403
Ensembl chrNW_004936523:6,544,207...6,584,452 		JBrowse link
G Il2 interleukin 2 ISO protein:increased expression:aqueous humor RGD PMID:21570674 RGD:5147908 NCBI chrNW_004936662:1,594,953...1,599,625
Ensembl chrNW_004936662:1,594,953...1,599,625 		JBrowse link
Toxoplasma Chorioretinitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO DNA:SNP:promoter:−1082G>A (human) RGD PMID:18436829 RGD:7365046 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502 		JBrowse link
G Il6 interleukin 6 susceptibility ISO DNA:polymorphism:promoter:-174G>C(human) RGD PMID:23336844 RGD:7829805 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G LOC101964975 interleukin-8 severity ISO protein:increased expression:serum (human) RGD PMID:17488320 RGD:39939053 NCBI chrNW_004936598:1,779,471...1,781,353
Ensembl chrNW_004936598:1,779,471...1,781,353 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16465
    sensory system disease 6279
      eye disease 3211
        retinal disease 1118
          retinitis 23
            chorioretinitis 6
              Toxoplasma Chorioretinitis 3
              birdshot chorioretinopathy 2
              disseminated chorioretinitis 0
              focal chorioretinitis + 0
              pars planitis + 0
Path 2
Term Annotations click to browse term
  disease 16465
    disease of anatomical entity 14116
      nervous system disease 12340
        Neurologic Manifestations 9046
          sensory system disease 6279
            eye disease 3211
              uveal disease 207
                uveitis 114
                  panuveitis 78
                    posterior uveitis 9
                      choroiditis 8
                        chorioretinitis 6
                          Toxoplasma Chorioretinitis 3
                          birdshot chorioretinopathy 2
                          disseminated chorioretinitis 0
                          focal chorioretinitis + 0
                          pars planitis + 0
paths to the root