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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Kaposi's sarcoma
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Accession:DOID:8632 term browser browse the term
Definition:A connective tissue cancer that derives_from lymphatic endothelium, and derives_from spindle cells, results_in_formation_of vascular channels that fill with blood cells, has_material_basis_in Human herpesvirus 8 (HHV8). (DO)
Synonyms:exact_synonym: Kaposi sarcoma;   Kaposis sarcoma;   anal Kaposi's sarcoma;   cardiac Kaposi's sarcoma;   central nervous system Kaposi's sarcoma;   conjunctival Kaposi's sarcoma;   corneal Kaposi's sarcoma;   cutaneous Kaposi's sarcoma;   esophageal Kaposi's sarcoma;   gallbladder Kaposi's sarcoma;   gastric Kaposi's sarcoma;   intestinal Kaposi's sarcoma;   multiple idiopathic pigmented hemangiosarcoma;   prostate Kaposi's sarcoma
 narrow_synonym: African lymphadenopathic Kaposi's sarcoma;   Kaposi's sarcoma of anus;   Kaposi's sarcoma of central nervous system;   Kaposi's sarcoma of conjunctiva;   Kaposi's sarcoma of cornea;   Kaposi's sarcoma of esophagus;   Kaposi's sarcoma of gastrointestinal sites;   Kaposi's sarcoma of heart;   Kaposi's sarcoma of lung;   Kaposi's sarcoma of lymph nodes;   Kaposi's sarcoma of palate;   Kaposi's sarcoma of penis;   Kaposi's sarcoma of skin;   Kaposi's sarcoma of soft tissue;   Kaposi's sarcoma of soft tissues;   Kaposi's sarcoma of the CNS;   Kaposi's sarcoma of the gallbladder;   Kaposi's sarcoma of the prostate;   Kaposi's sarcoma, lung;   Kaposi's sarcoma, skin;   MCD;   iatrogenic Kaposi's sarcoma;   lymph node Kaposi's sarcoma;   lymphadenopathic Kaposi's sarcoma;   palate Kaposi's sarcoma;   penis Kaposi's sarcoma;   pulmonary Kaposi's sarcoma;   soft tissue Kaposi's sarcoma
 related_synonym: Kaposi sarcoma, susceptibility to;   Kaposi's sarcoma-associated herpesvirus (KSHV);   MULTIPLE IDIOPATHIC PIGMENTED HEMANGIOSARCOMA, SUSCEPTIBILITY TO MULTICENTRIC CASTLEMAN DISEASE, SUSCEPTIBILITY TO
 primary_id: MESH:D012514
 alt_id: OMIM:148000
 xref: EFO:0000558;   EFO:0002613;   GARD:6814;   ICD10CM:C46;   ICD10CM:C46.0;   ICD10CM:C46.1;   ICD10CM:C46.2;   ICD10CM:C46.3;   ICD10CM:C46.4;   ICD10CM:C46.5;   ICD9CM:176;   ICD9CM:176.0;   ICD9CM:176.1;   ICD9CM:176.2;   ICD9CM:176.3;   ICD9CM:176.4;   ICD9CM:176.5;   NCI:C27500;   NCI:C3550;   NCI:C3551;   NCI:C4578;   NCI:C4579;   NCI:C5363;   NCI:C5523;   NCI:C5529;   NCI:C5602;   NCI:C5706;   NCI:C5842;   NCI:C6377;   NCI:C6749;   NCI:C7006;   NCI:C9087
For additional species annotation, visit the Alliance of Genome Resources.


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Kaposi's sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BPTF bromodomain PHD finger transcription factor ISO ClinVar Annotator: match by term: Kaposi sarcoma ClinVar PMID:28492532 NCBI chr12:14,112,943...14,254,810
Ensembl chr12:14,112,718...14,254,790 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO mRNA:increased expression:zone of skin (human) RGD PMID:18804962 RGD:155663668 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G IL6 interleukin 6 ISO ClinVar Annotator: match by term: Kaposi's sarcoma ClinVar
OMIM		 PMID:9769329 PMID:10720087 PMID:11001912 PMID:11889177 PMID:12519862 More... NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263 		JBrowse link
G PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma treatment ISO RGD PMID:21665152 RGD:38599159 NCBI chr 9:106,698,200...106,748,217
Ensembl chr 9:106,698,207...106,745,099 		JBrowse link
AIDS-Related Kaposi Sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:10861090 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879 		JBrowse link
Kaposiform Hemangioendothelioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 ISO RGD PMID:14517397 RGD:8655667 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916 		JBrowse link
G GNA14 G protein subunit alpha 14 ISO ClinVar Annotator: match by term: Kaposiform hemangioendothelioma ClinVar PMID:25741868 PMID:27476652 NCBI chr 1:230,341,947...230,545,123
Ensembl chr 1:230,341,942...230,546,120 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17412
    disease of cellular proliferation 7152
      Neoplasms by Histologic Type 4983
        Vascular Tissue Neoplasms 177
          Kaposi's sarcoma 7
            AIDS-Related Kaposi Sarcoma 1
            Kaposiform Hemangioendothelioma 2
            Non-AIDS-Related Kaposi Sarcoma 0
            rectum Kaposi's sarcoma 0
Path 2
Term Annotations click to browse term
  disease 17412
    disease of anatomical entity 14873
      Skin and Connective Tissue Diseases 6721
        connective tissue disease 5225
          Connective Tissue Neoplasms 1700
            connective tissue cancer 752
              Kaposi's sarcoma 7
                AIDS-Related Kaposi Sarcoma 1
                Kaposiform Hemangioendothelioma 2
                Non-AIDS-Related Kaposi Sarcoma 0
                rectum Kaposi's sarcoma 0
paths to the root