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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Kaposi's sarcoma
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Accession:DOID:8632 term browser browse the term
Definition:A connective tissue cancer that derives_from lymphatic endothelium, and derives_from spindle cells, results_in_formation_of vascular channels that fill with blood cells, has_material_basis_in Human herpesvirus 8 (HHV8). (DO)
Synonyms:exact_synonym: Kaposi sarcoma;   Kaposis sarcoma;   anal Kaposi's sarcoma;   cardiac Kaposi's sarcoma;   central nervous system Kaposi's sarcoma;   conjunctival Kaposi's sarcoma;   corneal Kaposi's sarcoma;   cutaneous Kaposi's sarcoma;   esophageal Kaposi's sarcoma;   gallbladder Kaposi's sarcoma;   gastric Kaposi's sarcoma;   intestinal Kaposi's sarcoma;   multiple idiopathic pigmented hemangiosarcoma;   prostate Kaposi's sarcoma
 narrow_synonym: African lymphadenopathic Kaposi's sarcoma;   Kaposi's sarcoma of anus;   Kaposi's sarcoma of central nervous system;   Kaposi's sarcoma of conjunctiva;   Kaposi's sarcoma of cornea;   Kaposi's sarcoma of esophagus;   Kaposi's sarcoma of gastrointestinal sites;   Kaposi's sarcoma of heart;   Kaposi's sarcoma of lung;   Kaposi's sarcoma of lymph nodes;   Kaposi's sarcoma of palate;   Kaposi's sarcoma of penis;   Kaposi's sarcoma of skin;   Kaposi's sarcoma of soft tissue;   Kaposi's sarcoma of soft tissues;   Kaposi's sarcoma of the CNS;   Kaposi's sarcoma of the gallbladder;   Kaposi's sarcoma of the prostate;   Kaposi's sarcoma, lung;   Kaposi's sarcoma, skin;   MCD;   iatrogenic Kaposi's sarcoma;   lymph node Kaposi's sarcoma;   lymphadenopathic Kaposi's sarcoma;   palate Kaposi's sarcoma;   penis Kaposi's sarcoma;   pulmonary Kaposi's sarcoma;   soft tissue Kaposi's sarcoma
 related_synonym: Kaposi sarcoma, susceptibility to;   Kaposi's sarcoma-associated herpesvirus (KSHV);   MULTIPLE IDIOPATHIC PIGMENTED HEMANGIOSARCOMA, SUSCEPTIBILITY TO MULTICENTRIC CASTLEMAN DISEASE, SUSCEPTIBILITY TO
 primary_id: MESH:D012514
 alt_id: OMIM:148000
 xref: EFO:0000558;   EFO:0002613;   GARD:6814;   ICD10CM:C46;   ICD10CM:C46.0;   ICD10CM:C46.1;   ICD10CM:C46.2;   ICD10CM:C46.3;   ICD10CM:C46.4;   ICD10CM:C46.5;   ICD9CM:176;   ICD9CM:176.0;   ICD9CM:176.1;   ICD9CM:176.2;   ICD9CM:176.3;   ICD9CM:176.4;   ICD9CM:176.5;   NCI:C27500;   NCI:C3550;   NCI:C3551;   NCI:C4578;   NCI:C4579;   NCI:C5363;   NCI:C5523;   NCI:C5529;   NCI:C5602;   NCI:C5706;   NCI:C5842;   NCI:C6377;   NCI:C6749;   NCI:C7006;   NCI:C9087
For additional species annotation, visit the Alliance of Genome Resources.


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Kaposi's sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BPTF bromodomain PHD finger transcription factor ISO ClinVar Annotator: match by term: Kaposi sarcoma ClinVar PMID:28492532 NCBI chr 9:12,586,107...12,703,296
Ensembl chr 9:12,590,333...12,703,422 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO mRNA:increased expression:zone of skin (human) RGD PMID:18804962 RGD:155663668 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G IL6 interleukin 6 ISO ClinVar Annotator: match by term: Kaposi's sarcoma ClinVar
OMIM		 PMID:9769329 PMID:10720087 PMID:11001912 PMID:11889177 PMID:12519862 More... NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519 		JBrowse link
G PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma treatment ISO RGD PMID:21665152 RGD:38599159 NCBI chr18:13,576,966...13,611,748
Ensembl chr18:13,570,999...13,611,141 		JBrowse link
AIDS-Related Kaposi Sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:10861090 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G IL32 interleukin 32 ISO mRNA:increased expression:zone of skin, blood serum (human) RGD PMID:29037857 RGD:150340744 NCBI chr 6:38,119,287...38,122,979 JBrowse link
Kaposiform Hemangioendothelioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 ISO RGD PMID:14517397 RGD:8655667 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G GNA14 G protein subunit alpha 14 ISO ClinVar Annotator: match by term: Kaposiform hemangioendothelioma ClinVar PMID:25741868 PMID:27476652 NCBI chr 1:80,992,992...81,178,362
Ensembl chr 1:80,992,863...81,177,674 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17774
    disease of cellular proliferation 7264
      Neoplasms by Histologic Type 5064
        Vascular Tissue Neoplasms 179
          Kaposi's sarcoma 8
            AIDS-Related Kaposi Sarcoma 2
            Kaposiform Hemangioendothelioma 2
            Non-AIDS-Related Kaposi Sarcoma 0
            rectum Kaposi's sarcoma 0
Path 2
Term Annotations click to browse term
  disease 17774
    disease of anatomical entity 15146
      Skin and Connective Tissue Diseases 6797
        connective tissue disease 5278
          Connective Tissue Neoplasms 1710
            connective tissue cancer 763
              Kaposi's sarcoma 8
                AIDS-Related Kaposi Sarcoma 2
                Kaposiform Hemangioendothelioma 2
                Non-AIDS-Related Kaposi Sarcoma 0
                rectum Kaposi's sarcoma 0
paths to the root