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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Kaposi's sarcoma
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Accession:DOID:8632 term browser browse the term
Definition:A connective tissue cancer that derives_from lymphatic endothelium, and derives_from spindle cells, results_in_formation_of vascular channels that fill with blood cells, has_material_basis_in Human herpesvirus 8 (HHV8). (DO)
Synonyms:exact_synonym: Kaposi sarcoma;   Kaposi sarcoma, susceptibility to;   Kaposi's sarcoma of anus;   Kaposi's sarcoma of conjunctiva;   Kaposi's sarcoma of cornea;   Kaposi's sarcoma of esophagus;   Kaposi's sarcoma of gastrointestinal sites;   Kaposi's sarcoma of lung;   Kaposi's sarcoma of lymph nodes;   Kaposi's sarcoma of palate;   Kaposi's sarcoma of penis;   Kaposi's sarcoma of skin;   Kaposi's sarcoma of soft tissue;   Kaposi's sarcoma of soft tissues;   Kaposi's sarcoma of the CNS;   Kaposi's sarcoma of the gallbladder;   Kaposi's sarcoma of the prostate;   Kaposi's sarcoma, lung;   Kaposi's sarcoma, skin;   Kaposis sarcoma;   anal Kaposi's sarcoma;   cardiac Kaposi's sarcoma;   central nervous system Kaposi's sarcoma;   conjunctival Kaposi's sarcoma;   corneal Kaposi's sarcoma;   cutaneous Kaposi's sarcoma;   esophageal Kaposi's sarcoma;   gallbladder Kaposi's sarcoma;   gastric Kaposi's sarcoma;   intestinal Kaposi's sarcoma;   lymph node Kaposi's sarcoma;   lymphadenopathic Kaposi's sarcoma;   multiple idiopathic pigmented hemangiosarcoma;   palate Kaposi's sarcoma;   penis Kaposi's sarcoma;   prostate Kaposi's sarcoma;   pulmonary Kaposi's sarcoma;   soft tissue Kaposi's sarcoma
 narrow_synonym: Kaposi's sarcoma of central nervous system;   Kaposi's sarcoma of heart;   MCD;   MULTIPLE IDIOPATHIC PIGMENTED HEMANGIOSARCOMA, SUSCEPTIBILITY TO MULTICENTRIC CASTLEMAN DISEASE, SUSCEPTIBILITY TO
 related_synonym: African lymphadenopathic Kaposi's sarcoma;   Kaposi's sarcoma-associated herpesvirus (KSHV)
 primary_id: MESH:D012514
 alt_id: OMIM:148000
 xref: GARD:6814;   ICD10CM:C46;   ICD10CM:C46.0;   ICD10CM:C46.1;   ICD10CM:C46.2;   ICD10CM:C46.3;   ICD10CM:C46.4;   ICD10CM:C46.5;   ICD9CM:176;   ICD9CM:176.0;   ICD9CM:176.1;   ICD9CM:176.2;   ICD9CM:176.3;   ICD9CM:176.4;   ICD9CM:176.5;   NCI:C27500;   NCI:C3550;   NCI:C3551;   NCI:C4578;   NCI:C4579;   NCI:C5363;   NCI:C5523;   NCI:C5529;   NCI:C5602;   NCI:C5706;   NCI:C5842;   NCI:C6377;   NCI:C6749;   NCI:C7006;   NCI:C9087
For additional species annotation, visit the Alliance of Genome Resources.


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Kaposi's sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 susceptibility ISO ClinVar Annotator: match by synonym: Kaposi sarcoma, susceptibility to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:9769329 PMID:10720087 PMID:11001912 PMID:11889177 PMID:12519862 PMID:12560873 PMID:12719374 PMID:15070960 PMID:15331795 PMID:15472205 PMID:16150725 PMID:16278864 PMID:17623760 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma treatment ISO RGD PMID:21665152 RGD:38599159 NCBI chr 6:51,465,696...51,501,234
Ensembl chr 6:51,465,908...51,498,337
JBrowse link
G Tp53 tumor protein p53 ISO GAD PMID:15118671 RGD:1331525 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
AIDS-Related Kaposi Sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:10861090 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
Kaposiform Hemangioendothelioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 ISO RGD PMID:14517397 RGD:8655667 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Gna14 G protein subunit alpha 14 ISO ClinVar Annotator: match by term: Kaposiform hemangioendothelioma ClinVar PMID:27476652 NCBI chr 1:235,165,775...235,347,986
Ensembl chr 1:235,166,718...235,347,937
JBrowse link
Non-AIDS-Related Kaposi Sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 ISO ClinVar Annotator: match by term: Non AIDS related Kaposi sarcoma ClinVar PMID:9769329 PMID:10720087 PMID:11001912 PMID:11889177 PMID:12519862 PMID:12560873 PMID:12719374 PMID:15070960 PMID:15331795 PMID:15472205 PMID:16150725 PMID:16278864 PMID:17623760 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16918
    disease of cellular proliferation 6900
      Neoplasms by Histologic Type 4436
        Vascular Tissue Neoplasms 130
          Kaposi's sarcoma 6
            AIDS-Related Kaposi Sarcoma 1
            Kaposiform Hemangioendothelioma 2
            Non-AIDS-Related Kaposi Sarcoma 1
            rectum Kaposi's sarcoma 0
Path 2
Term Annotations click to browse term
  disease 16918
    disease of anatomical entity 16286
      Skin and Connective Tissue Diseases 5625
        connective tissue disease 4355
          Connective Tissue Neoplasms 1609
            connective tissue cancer 691
              Kaposi's sarcoma 6
                AIDS-Related Kaposi Sarcoma 1
                Kaposiform Hemangioendothelioma 2
                Non-AIDS-Related Kaposi Sarcoma 1
                rectum Kaposi's sarcoma 0
paths to the root