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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:extraskeletal myxoid chondrosarcoma
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Accession:DOID:6496 term browser browse the term
Definition:An extraosseous chondrosarcoma that has_material_basis_in cells derived from transformed cells that produce cartilage and is characterized by a marked abundance of extracellular mucoid (myxoid) matrix. (DO)
Synonyms:exact_synonym: EMC;   myxoid extraosseous chondrosarcoma
 primary_id: MESH:C563195
 alt_id: OMIM:612237
 xref: NCI:C27502;   ORDO:209916
For additional species annotation, visit the Alliance of Genome Resources.


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extraskeletal myxoid chondrosarcoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 ISO OMIM NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO OMIM NCBI chr10:70,689,863...70,721,892
Ensembl chr10:70,689,863...70,721,892
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17147
    disease of cellular proliferation 6946
      Neoplasms by Histologic Type 4765
        Connective and Soft Tissue Neoplasms 1719
          extraskeletal myxoid chondrosarcoma 2
Path 2
Term Annotations click to browse term
  disease 17147
    disease of cellular proliferation 6946
      cancer 4896
        organ system cancer 4728
          musculoskeletal system cancer 724
            connective tissue cancer 703
              bone cancer 671
                bone sarcoma 73
                  chondrosarcoma 12
                    extraosseous chondrosarcoma 2
                      extraskeletal myxoid chondrosarcoma 2
paths to the root