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ONTOLOGY REPORT - ANNOTATIONS
Term:encephalomyelitis
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Accession:DOID:640 term browser browse the term
Definition:A general term indicating inflammation of the BRAIN and SPINAL CORD, often used to indicate an infectious process, but also applicable to a variety of autoimmune and toxic-metabolic conditions. There is significant overlap regarding the usage of this term and ENCEPHALITIS in the literature.
Synonyms:exact_synonym: encephalitis &/or myelitis;   inflammatory encephalomyelitis;   myeloencephalitides;   myeloencephalitis
 primary_id: MESH:D004679
 xref: NCI:C34580
For additional species annotation, visit the Alliance of Genome Resources.

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encephalomyelitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:6482701
RGD:6482707
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase JBrowse link 10 88,490,798 88,497,357 RGD:6483347
G Mir155 microRNA 155 JBrowse link 11 24,176,603 24,176,667 RGD:21079465
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:1581329
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:12904033
acute disseminated encephalomyelitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:8157598
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:5147662
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147662
Acute Experimental Autoimmune Encephalomyelitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mag myelin-associated glycoprotein JBrowse link 1 89,345,325 89,360,905 RGD:9685300
chronic fatigue syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl24 C-C motif chemokine ligand 24 JBrowse link 12 24,131,529 24,152,626 RGD:11538286
G Cd28 Cd28 molecule JBrowse link 9 67,546,408 67,573,858 RGD:5131614
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:11538286
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:11538286
G Disc1 DISC1 scaffold protein JBrowse link 19 57,818,838 58,069,992 RGD:5509831
G Il16 interleukin 16 JBrowse link 1 145,781,923 145,881,538 RGD:11538286
G Prf1 perforin 1 JBrowse link 20 30,915,294 30,920,804 RGD:6482801
G Ren renin JBrowse link 13 50,502,724 50,513,953 RGD:6892702
G RT1-Ba RT1 class II, locus Ba JBrowse link 20 4,066,133 4,070,726 RGD:5147827
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:28867246
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:11538286
Chronic Relapsing Experimental Autoimmune Encephalomyelitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8655962
G Nefh neurofilament heavy JBrowse link 14 85,181,572 85,191,557 RGD:27226817
G Plp1 proteolipid protein 1 JBrowse link X 107,494,326 107,511,355 RGD:30296670
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:13208507
Experimental Autoimmune Encephalomyelitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2m alpha-2-macroglobulin JBrowse link 4 154,309,426 154,359,138 RGD:10046021
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:1559178
G Adam8 ADAM metallopeptidase domain 8 JBrowse link 1 212,317,510 212,332,895 RGD:2325244
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:2313022
G Akap12 A-kinase anchoring protein 12 JBrowse link 1 40,816,130 40,906,582 RGD:14348972
G Alox15 arachidonate 15-lipoxygenase JBrowse link 10 56,953,692 56,962,145 RGD:5509618
G Amigo2 adhesion molecule with Ig like domain 2 JBrowse link 7 138,704,124 138,707,221 RGD:14392778
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:2306942
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:13703134
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:5148015
RGD:8696030
RGD:5490117
RGD:5490116
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:6482690
G B4galt6 beta-1,4-galactosyltransferase 6 JBrowse link 18 15,462,913 15,525,584 RGD:14390079
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:10059360
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:7175513
G C6 complement C6 JBrowse link 2 54,460,333 54,533,801 RGD:625607
G Cacna1b calcium voltage-gated channel subunit alpha1 B JBrowse link 3 1,740,026 1,924,959 RGD:1580151
G Calca calcitonin-related polypeptide alpha JBrowse link 1 184,184,018 184,188,922 RGD:5684360
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:2311436
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:2311436
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:2311436
G Cav3 caveolin 3 JBrowse link 4 144,382,945 144,398,919 RGD:1582168
G Cblb Cbl proto-oncogene B JBrowse link 11 51,037,383 51,202,761 RGD:11554173
G Ccl1 C-C motif chemokine ligand 1 JBrowse link 10 69,534,976 69,537,836 RGD:4145472
G Ccl11 C-C motif chemokine ligand 11 JBrowse link 10 69,434,965 69,439,566 RGD:4145472
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:2307114
RGD:4145472
RGD:8548888
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:2307114
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4890027
RGD:2307114
G Ccr1 C-C motif chemokine receptor 1 JBrowse link 8 132,996,646 133,002,201 RGD:5688165
RGD:5688167
G Ccr2 C-C motif chemokine receptor 2 RGD:632391
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:6893394
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4890436
G Cd28 Cd28 molecule JBrowse link 9 67,546,408 67,573,858 RGD:2307203
G Cd4 Cd4 molecule JBrowse link 4 157,381,862 157,408,357 RGD:10058963
RGD:10058968
G Cd80 Cd80 molecule JBrowse link 11 64,815,201 64,855,293 RGD:6902906
G Cd86 CD86 molecule JBrowse link 11 67,060,305 67,117,990 RGD:4892227
RGD:4892207
G Ciita class II, major histocompatibility complex, transactivator JBrowse link 10 5,212,621 5,260,641 RGD:1358146
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase JBrowse link 10 88,490,798 88,497,357 RGD:6483335
RGD:6483353
RGD:6483351
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:13450949
G Cpb2 carboxypeptidase B2 JBrowse link 15 57,290,849 57,339,762 RGD:7243111
G Cspg4 chondroitin sulfate proteoglycan 4 JBrowse link 8 61,532,465 61,567,510 RGD:5686852
RGD:5686863
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:6902906
G Ctsc cathepsin C JBrowse link 1 151,918,514 151,949,979 RGD:1599653
G Ctss cathepsin S JBrowse link 2 197,655,780 197,679,768 RGD:5686915
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:4891973
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link 8 128,740,756 128,754,514 RGD:4891973
RGD:9491767
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:7257694
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:5135506
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:7243155
G Dll1 delta like canonical Notch ligand 1 JBrowse link 1 57,318,621 57,326,732 RGD:6482235
G Dusp10 dual specificity phosphatase 10 JBrowse link 13 104,284,660 104,321,455 RGD:7775013
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 JBrowse link 1 259,692,020 259,818,922 RGD:9685491
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:11554173
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5508732
RGD:5508735
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:12903984
G Fcgr2a Fc fragment of IgG receptor IIa JBrowse link 13 91,146,878 91,163,691 RGD:5508383
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:8655647
RGD:9831448
G Flt1 Fms related receptor tyrosine kinase 1 JBrowse link 12 9,033,993 9,205,886 RGD:10402153
G Foxo3 forkhead box O3 JBrowse link 20 46,428,078 46,519,156 RGD:11554173
G Ghrh growth hormone releasing hormone JBrowse link 3 153,449,124 153,468,794 RGD:5687168
G Ghrl ghrelin and obestatin prepropeptide JBrowse link 4 145,674,157 145,678,066 RGD:12905041
G Gjc2 gap junction protein, gamma 2 JBrowse link 10 45,526,740 45,535,520 RGD:13208593
G Gli1 GLI family zinc finger 1 JBrowse link 7 70,620,794 70,633,171 RGD:12801440
G Glud1 glutamate dehydrogenase 1 JBrowse link 16 10,661,486 10,695,557 RGD:6484657
G Havcr2 hepatitis A virus cellular receptor 2 JBrowse link 10 31,561,838 31,590,624 RGD:9686086
RGD:9686113
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:5508469
RGD:5508476
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:7987912
RGD:10755692
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:6483353
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7364993
G Il10ra interleukin 10 receptor subunit alpha JBrowse link 8 49,558,062 49,573,891 RGD:2316323
G Il12a interleukin 12A JBrowse link 2 165,076,945 165,083,996 RGD:724447
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:4831840
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:5684366
RGD:5684367
G Il16 interleukin 16 JBrowse link 1 145,781,923 145,881,538 RGD:5024940
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:4831840
RGD:9212317
RGD:4888522
RGD:4889113
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889543
RGD:4889542
G Il18r1 interleukin 18 receptor 1 JBrowse link 9 47,184,404 47,217,403 RGD:2311529
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:8551836
G Il21 interleukin 21 JBrowse link 2 123,965,021 123,972,356 RGD:5147399
G Il21r interleukin 21 receptor JBrowse link 1 196,996,405 197,024,185 RGD:6892939
RGD:6892940
G Il22 interleukin 22 JBrowse link 7 61,236,037 61,240,502 RGD:2311529
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:2311529
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:7829778
RGD:8142395
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:2307412
RGD:12791289
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:9698418
RGD:9698436
G Jag1 jagged canonical Notch ligand 1 JBrowse link 3 130,079,361 130,114,781 RGD:6482235
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:6483041
G Jak3 Janus kinase 3 JBrowse link 16 20,107,471 20,120,678 RGD:11533939
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:5684404
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:12910744
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:13800552
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:1625038
RGD:4143220
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:1358431
G Mbp myelin basic protein JBrowse link 18 79,326,738 79,437,310 RGD:7349334
RGD:30296670
RGD:11554173
G Mdk midkine JBrowse link 3 80,841,003 80,843,895 RGD:9831448
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2325703
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:8547909
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:8547909
RGD:13204801
RGD:13204762
RGD:8547936
G Mobp myelin-associated oligodendrocyte basic protein JBrowse link 8 128,824,420 128,854,492 RGD:27226694
G Mog myelin oligodendrocyte glycoprotein JBrowse link 20 2,003,871 2,014,284 RGD:9685372
RGD:11554173
RGD:9685375
RGD:9685373
G Mt1 metallothionein 1 JBrowse link 19 11,301,991 11,303,007 RGD:6484112
G Mt2A metallothionein 2A JBrowse link 19 11,307,966 11,308,740 RGD:6484112
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:6484112
G Nefl neurofilament light JBrowse link 15 44,799,378 44,803,251 RGD:2299007
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:11554173
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:5508386
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:5508312
RGD:5508386
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:5509069
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 1 100,554,577 100,559,896 RGD:6480877
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:4892331
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:5684777
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:11080975
G Pdgfra platelet derived growth factor receptor alpha JBrowse link 14 35,527,926 35,581,130 RGD:11080975
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:11080975
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma JBrowse link 6 51,465,696 51,501,234 RGD:6482686
G Plp1 proteolipid protein 1 JBrowse link X 107,494,326 107,511,355 RGD:11554173
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:11554173
G Prf1 perforin 1 JBrowse link 20 30,915,294 30,920,804 RGD:6482806
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:6484540
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link 3 15,560,685 15,582,339 RGD:5688149
RGD:5688250
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5688149
RGD:5688250
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:9831448
G Qk quaking JBrowse link 1 50,983,647 51,050,692 RGD:10045997
G Rangrf RAN guanine nucleotide release factor JBrowse link 10 55,559,049 55,560,420 RGD:6771380
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:2298887
G RT1-Ba RT1 class II, locus Ba JBrowse link 20 4,066,133 4,070,726 RGD:5147622
RGD:5147639
RGD:5147666
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:5147639
RGD:5147666
RGD:5147647
G RT1-Da RT1 class II, locus Da JBrowse link 20 4,127,644 4,132,616 RGD:5490166
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147647
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:13208549
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:12801423
RGD:12801440
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:11554173
G Slpi secretory leukocyte peptidase inhibitor JBrowse link 3 160,799,979 160,802,228 RGD:9999395
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:730073
G Srsf9 serine and arginine rich splicing factor 9 JBrowse link 12 47,039,714 47,046,022 RGD:11040805
G Stat1 signal transducer and activator of transcription 1 JBrowse link 9 54,287,540 54,327,958 RGD:6483041
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:6483041
RGD:6892946
G Stat4 signal transducer and activator of transcription 4 JBrowse link 9 54,340,649 54,457,753 RGD:7207888
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:2302088
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:2302088
G Timp3 TIMP metallopeptidase inhibitor 3 JBrowse link 7 23,543,125 23,594,170 RGD:1559178
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:2312575
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:2312575
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:12904661
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:1580348
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:8158064
RGD:13210791
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:634258
RGD:7421596
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:5685386
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15984
    disease of anatomical entity 15262
      nervous system disease 10752
        central nervous system disease 8839
          encephalomyelitis 221
            Equine Encephalomyelitis + 0
            Experimental Autoimmune Encephalomyelitis + 214
            Progressive Encephalomyelitis with Rigidity 0
            acute disseminated encephalomyelitis + 3
            chronic fatigue syndrome 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.