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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:migraine
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Accession:DOID:6364 term browser browse the term
Definition:A brain disease that is characterized by moderate to severe headaches, nausea, extreme sensitivity to light and sound and intense unilaterial throbbing or pulsing. (DO)
Synonyms:exact_synonym: MA;   MFTS;   MGAU;   abdominal migraine;   abdominal migraines;   acute confusional migraine;   acute confusional migraines;   cervical migraine syndrome;   cervical migraine syndromes;   hemicrania migraine;   hemicrania migraines;   migraine disorder;   migraine disorders;   migraine headache;   migraine headaches;   migraine variant;   migraine variants;   migraine with or without aura;   migraines;   sick headache;   sick headaches;   status migrainosus
 related_synonym: MGR1;   MGR10;   MGR11;   MGR12;   MGR2;   MGR3;   MGR5;   MGR8;   migraine with or without aura, susceptibility to;   migraine with or without aura, susceptibility to, 1;   migraine with or without aura, susceptibility to, 10;   migraine with or without aura, susceptibility to, 11;   migraine with or without aura, susceptibility to, 12;   migraine with or without aura, susceptibility to, 13;   migraine with or without aura, susceptibility to, 2;   migraine with or without aura, susceptibility to, 3;   migraine with or without aura, susceptibility to, 5;   migraine with or without aura, susceptibility to, 8;   migraine, resistance to
 primary_id: MESH:D008881
 alt_id: OMIM:157300;   OMIM:300125;   OMIM:607498;   OMIM:607508;   OMIM:609570;   OMIM:610208;   OMIM:610209;   OMIM:611706;   OMIM:613656
 xref: EFO:0003821;   ICD10CM:G43;   ICD9CM:346;   MONDO:0005277;   NCI:C89715;   OMIM:PS157300
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
migraine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 breast cancer 2, early onset ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:15070707 PMID:16030099 PMID:16758124 PMID:17020472 PMID:18783588 More... NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794
JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit ISO DNA:missense mutation:cds:p.E1015K(human)
ClinVar Annotator: match by term: Migraine
ClinVar
RGD
PMID:22249839 PMID:25741868 PMID:27959697 PMID:28007337 PMID:28492532 More... RGD:10054426 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875
JBrowse link
G Calca calcitonin/calcitonin-related polypeptide, alpha no_association ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:12574409 PMID:17635592 PMID:35115687 PMID:21195698 PMID:20959432 RGD:5684017, RGD:5684020 NCBI chr 7:114,225,223...114,236,145
Ensembl chr 7:114,230,713...114,235,592
JBrowse link
G Calcb calcitonin-related polypeptide, beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:35115687 NCBI chr 7:114,315,790...114,322,603
Ensembl chr 7:114,317,878...114,322,600
JBrowse link
G Capn3 calpain 3 ISO ClinVar Annotator: match by term: Migraine Disorders ClinVar PMID:7720071 PMID:9266733 PMID:10330340 PMID:10679950 PMID:14578192 More... NCBI chr 2:120,294,074...120,335,400
Ensembl chr 2:120,294,053...120,335,399
JBrowse link
G Cd40lg CD40 ligand ISO protein:increased expression:serum RGD PMID:21331754 RGD:5490597 NCBI chr  X:56,257,448...56,269,402
Ensembl chr  X:56,257,503...56,269,402
JBrowse link
G Clcn1 chloride channel, voltage-sensitive 1 ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:8533761 PMID:8845168 PMID:10737121 PMID:12163078 PMID:20301529 More... NCBI chr 6:42,263,552...42,292,693
Ensembl chr 6:42,263,619...42,292,690
JBrowse link
G Dsp desmoplakin ISO ClinVar Annotator: match by term: Migraine Disorders ClinVar PMID:21606396 PMID:23292937 PMID:23861362 PMID:24033266 PMID:24503780 More... NCBI chr13:38,335,357...38,382,553
Ensembl chr13:38,335,270...38,382,553
JBrowse link
G Ednra endothelin receptor type A ISO DNA:polymorphism:-231A>G
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Migraine, resistance to
CTD
OMIM
ClinVar
RGD
PMID:11376172 PMID:23058564 PMID:11376172 RGD:734916 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
JBrowse link
G Esr1 estrogen receptor 1 (alpha) ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Migraine with or without aura, susceptibility to
CTD
OMIM
ClinVar
PMID:15133719 PMID:25741868 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614
JBrowse link
G Fhl5 four and a half LIM domains 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23793025 NCBI chr 4:25,199,907...25,242,852
Ensembl chr 4:25,199,908...25,242,876
JBrowse link
G Htr1f 5-hydroxytryptamine (serotonin) receptor 1F ISO CTD Direct Evidence: marker/mechanism CTD PMID:35115687 NCBI chr16:64,745,092...64,926,147
Ensembl chr16:64,745,092...64,926,217
JBrowse link
G Htr2a 5-hydroxytryptamine (serotonin) receptor 2A ISO CTD Direct Evidence: marker/mechanism CTD PMID:12482207 NCBI chr14:74,878,314...74,944,299
Ensembl chr14:74,878,280...74,946,934
JBrowse link
G Htr7 5-hydroxytryptamine (serotonin) receptor 7 ISO RGD PMID:20236348 RGD:6482182 NCBI chr19:35,935,815...36,035,533
Ensembl chr19:35,936,134...36,034,907
JBrowse link
G Kcnk18 potassium channel, subfamily K, member 18 susceptibility ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Migraine, with or without aura, susceptibility to, 13
CTD
ClinVar
OMIM
PMID:20871611 PMID:25741868 PMID:28492532 PMID:30573346 NCBI chr19:59,208,080...59,225,802
Ensembl chr19:59,207,646...59,225,806
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21666692 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Maoa monoamine oxidase A no_association ISO RGD PMID:15088153 RGD:1600725 NCBI chr  X:16,485,937...16,554,051
Ensembl chr  X:16,485,937...16,554,057
JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:25741868 PMID:28492532 NCBI chr10:80,941,749...80,960,531
Ensembl chr10:80,941,749...80,969,809
JBrowse link
G Mfn1 mitofusin 1 ISO protein:decreased expression:trigeminal ganglion (rat) RGD PMID:27984195 RGD:12910755 NCBI chr 3:32,583,594...32,633,384
Ensembl chr 3:32,583,614...32,633,388
JBrowse link
G mt-Nd1 NADH dehydrogenase 1, mitochondrial ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:15466014 PMID:16969869 PMID:17562939 PMID:20301353 PMID:24830958 More... NCBI chr MT:2,751...3,707
Ensembl chr MT:2,751...3,707
JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility ISO DNA:SNP:cds:677C>T(human) RGD PMID:21635773 RGD:7387244 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
JBrowse link
G Myh6 myosin, heavy polypeptide 6, cardiac muscle, alpha ISO ClinVar Annotator: match by term: Migraine Disorders ClinVar PMID:15998695 PMID:23861362 PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr14:55,179,378...55,205,553
Ensembl chr14:55,179,378...55,204,384
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell ISO associated with Glaucoma;DNA:snp, haplotype:promoter:g.-786T>C (human) RGD PMID:16123422 RGD:7771539 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472
JBrowse link
G Notch3 notch 3 ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:25741868 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826
JBrowse link
G Nppb natriuretic peptide type B ISO protein:increased expression:serum RGD PMID:22165670 RGD:5685652 NCBI chr 4:148,070,264...148,071,662
Ensembl chr 4:148,070,245...148,071,662
JBrowse link
G Phactr1 phosphatase and actin regulator 1 ISO DNA:SNP:intron:g.13011943 (rs9349379) (human) RGD PMID:28957430 PMID:27066539 RGD:401901172, RGD:401901243 NCBI chr13:42,833,909...43,292,002
Ensembl chr13:42,834,099...43,292,002
JBrowse link
G Ppox protoporphyrinogen oxidase ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:25741868 NCBI chr 1:171,104,564...171,108,955
Ensembl chr 1:171,103,563...171,108,760
JBrowse link
G Prdm16 PR domain containing 16 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21666692 NCBI chr 4:154,400,579...154,721,851
Ensembl chr 4:154,400,582...154,721,330
JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha ISO ClinVar Annotator: match by term: Migraine Disorders ClinVar PMID:11804990 PMID:19056759 PMID:22581653 PMID:24033266 PMID:25741868 More... NCBI chr 9:119,312,470...119,408,096
Ensembl chr 9:119,312,474...119,408,082
JBrowse link
G Slc2a1 solute carrier family 2 (facilitated glucose transporter), member 1 ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:25741868 PMID:28492532 NCBI chr 4:118,966,001...118,994,527
Ensembl chr 4:118,965,908...118,995,180
JBrowse link
G Stim1 stromal interaction molecule 1 ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:25741868 NCBI chr 7:101,909,279...102,086,525
Ensembl chr 7:101,917,013...102,086,526
JBrowse link
G Sugct succinyl-CoA glutarate-CoA transferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:23793025 NCBI chr13:17,032,057...17,869,380
Ensembl chr13:17,032,057...17,870,138
JBrowse link
G Tab2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 ISO ClinVar Annotator: match by term: Migraine ClinVar PMID:25741868 PMID:28386937 PMID:28492532 PMID:29700987 PMID:31250519 NCBI chr10:7,781,412...7,832,039
Ensembl chr10:7,781,417...7,831,994
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II ISO CTD Direct Evidence: marker/mechanism CTD PMID:16885183 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
JBrowse link
G Tnf tumor necrosis factor susceptibility ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Migraine with or without aura, susceptibility to, 1
CTD
ClinVar
OMIM
PMID:25741868 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Trpm8 transient receptor potential cation channel, subfamily M, member 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21666692 NCBI chr 1:88,234,457...88,318,909
Ensembl chr 1:88,205,383...88,317,015
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 ISO DNA:snp:intron:g.IVS2+2841C>T rs222741 (human) RGD PMID:22162417 RGD:7175557 NCBI chr11:73,124,975...73,152,148
Ensembl chr11:73,125,118...73,152,068
JBrowse link
Familial Basilar Migraine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide ISO ClinVar Annotator: match by term: Migraine, familial basilar ClinVar PMID:16344534 PMID:18498390 PMID:23954377 PMID:25741868 PMID:28492532 NCBI chr 1:172,099,276...172,125,631
Ensembl chr 1:172,099,276...172,125,631
JBrowse link
familial hemiplegic migraine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:9536098 PMID:11439943 PMID:12023326 PMID:12539047 PMID:14667076 More... NCBI chr 1:172,099,276...172,125,631
Ensembl chr 1:172,099,276...172,125,631
JBrowse link
G Atp1a4 ATPase, Na+/K+ transporting, alpha 4 polypeptide ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:172,051,075...172,085,991
Ensembl chr 1:172,051,080...172,085,981
JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit IAGP
ISO
OMIM:141500 | OMIM:300125 | OMIM:602481 | OMIM:607516 | OMIM:609634
ClinVar Annotator: match by term: Familial hemiplegic migraine
MouseDO
ClinVar
PMID:8734765 PMID:8898206 PMID:9488686 PMID:9566402 PMID:9915947 More... NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875
JBrowse link
G Casq1 calsequestrin 1 ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:172,037,461...172,047,462
Ensembl chr 1:172,037,461...172,047,435
JBrowse link
G Copa coatomer protein complex subunit alpha ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:171,909,885...171,949,899
Ensembl chr 1:171,910,096...171,949,897
JBrowse link
G Dcaf8 DDB1 and CUL4 associated factor 8 ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:171,975,574...172,023,959
Ensembl chr 1:171,975,651...172,024,572
JBrowse link
G Igsf8 immunoglobulin superfamily, member 8 ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:172,139,934...172,147,410
Ensembl chr 1:172,089,208...172,147,408
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:172,168,777...172,201,652
Ensembl chr 1:172,168,777...172,201,652
JBrowse link
G Kcnj9 potassium inwardly-rectifying channel, subfamily J, member 9 ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:172,148,075...172,156,889
Ensembl chr 1:172,148,068...172,156,885
JBrowse link
G Ncstn nicastrin ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:171,893,580...171,910,356
Ensembl chr 1:171,893,580...171,910,362
JBrowse link
G Pea15a proliferation and apoptosis adaptor protein 15A ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:172,024,295...172,034,298
Ensembl chr 1:172,024,295...172,034,371
JBrowse link
G Pex19 peroxisomal biogenesis factor 19 ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:28492532 NCBI chr 1:171,954,322...171,964,064
Ensembl chr 1:171,954,322...171,964,060
JBrowse link
G Scn1a sodium channel, voltage-gated, type I, alpha ISO ClinVar Annotator: match by term: Familial hemiplegic migraine ClinVar PMID:18621678 PMID:19220312 PMID:20301562 PMID:25741868 PMID:26467025 More... NCBI chr 2:66,101,125...66,271,181
Ensembl chr 2:66,101,122...66,271,184
JBrowse link
familial hemiplegic migraine 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit ISO ClinVar Annotator: match by term: Migraine, familial hemiplegic 1, with progressive cerebellar ataxia | ClinVar Annotator: match by term: Migraine, familial hemiplegic, 1 | ClinVar Annotator: match by term: Migraine, sporadic hemiplegic, with progressive cerebellar ataxia | ClinVar Annotator: match by term: Sporadic hemiplegic migraine
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:7537420 PMID:8734765 PMID:8898206 PMID:9488686 PMID:9566402 More... NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875
JBrowse link
G Wdr45 WD repeat domain 45 ISO ClinVar Annotator: match by term: Migraine, familial hemiplegic, 1 ClinVar PMID:25741868 NCBI chr  X:7,588,212...7,594,439
Ensembl chr  X:7,580,572...7,594,445
JBrowse link
familial hemiplegic migraine 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide ISO
IAGP
ClinVar Annotator: match by term: Migraine, familial hemiplegic, 2
OMIM:602481
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
MouseDO
CTD
PMID:9536098 PMID:9579893 PMID:11439943 PMID:12023326 PMID:12539047 More... NCBI chr 1:172,099,276...172,125,631
Ensembl chr 1:172,099,276...172,125,631
JBrowse link
familial hemiplegic migraine 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1a sodium channel, voltage-gated, type I, alpha ISO ClinVar Annotator: match by term: Migraine, familial hemiplegic, 3
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:1893099 PMID:9536098 PMID:11254444 PMID:11254445 PMID:11359211 More... NCBI chr 2:66,101,125...66,271,181
Ensembl chr 2:66,101,122...66,271,184
JBrowse link
migraine with aura term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide ISO RGD PMID:12953268 RGD:1358436 NCBI chr 1:172,099,276...172,125,631
Ensembl chr 1:172,099,276...172,125,631
JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit ISO DNA:mutation:cds:P.V1457L(human)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:35115687 PMID:10408532 RGD:10054422 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875
JBrowse link
G Dbh dopamine beta hydroxylase ISO DNA:insertion, deletion:5' utr:g.-4767+?--4688-? (human) RGD PMID:17095019 RGD:1625569 NCBI chr 2:27,055,519...27,073,216
Ensembl chr 2:27,055,245...27,073,212
JBrowse link
G Drd2 dopamine receptor D2 ISO DNA:snp:cds:p.H313H (human) RGD PMID:9513185 RGD:1358603 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477
JBrowse link
G Hmox2 heme oxygenase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35115687 NCBI chr16:4,544,225...4,584,606
Ensembl chr16:4,544,225...4,584,606
JBrowse link
G Mpped2 metallophosphoesterase domain containing 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35115687 NCBI chr 2:106,523,526...106,699,684
Ensembl chr 2:106,523,614...106,698,701
JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility ISO DNA:SNP:cds:677C>T(human) RGD PMID:21635773 RGD:7387244 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
JBrowse link
G Notch3 notch 3 ISO ClinVar Annotator: match by term: Migraine with aura ClinVar PMID:32581362 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826
JBrowse link
G Trpv3 transient receptor potential cation channel, subfamily V, member 3 ISO DNA:snp:intron:g.36670T>C rs7217270 (human) RGD PMID:22162417 RGD:7175557 NCBI chr11:73,158,315...73,191,194
Ensembl chr11:73,158,214...73,191,189
JBrowse link
migraine without aura term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Astn2 astrotactin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22683712 NCBI chr 4:65,299,040...66,322,774
Ensembl chr 4:65,299,040...66,322,848
JBrowse link
G Calca calcitonin/calcitonin-related polypeptide, alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:11304026 PMID:14659530 NCBI chr 7:114,225,223...114,236,145
Ensembl chr 7:114,230,713...114,235,592
JBrowse link
G Eno2 enolase 2, gamma neuronal ISO protein:increased expression:serum RGD PMID:21293918 RGD:5508769 NCBI chr 6:124,737,018...124,746,489
Ensembl chr 6:124,737,016...124,746,636
JBrowse link
G Ldlr low density lipoprotein receptor ISO DNA:repeat:exon (human) RGD PMID:12873747 RGD:5490245 NCBI chr 9:21,634,872...21,661,215
Ensembl chr 9:21,634,779...21,661,215
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22683712 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Mef2d myocyte enhancer factor 2D ISO CTD Direct Evidence: marker/mechanism CTD PMID:22683712 NCBI chr 3:88,049,248...88,079,398
Ensembl chr 3:88,049,679...88,079,393
JBrowse link
G Notch3 notch 3 ISO ClinVar Annotator: match by term: Migraine without aura ClinVar PMID:8878478 PMID:9388399 PMID:12754354 PMID:15229130 PMID:15857853 More... NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826
JBrowse link
G Phactr1 phosphatase and actin regulator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22683712 NCBI chr13:42,833,909...43,292,002
Ensembl chr13:42,834,099...43,292,002
JBrowse link
G S100b S100 protein, beta polypeptide, neural ISO protein:increased expression:serum RGD PMID:21293918 RGD:5508769 NCBI chr10:76,089,670...76,097,153
Ensembl chr10:76,089,687...76,096,993
JBrowse link
G Tac1 tachykinin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11304026 NCBI chr 6:7,555,061...7,562,978
Ensembl chr 6:7,554,879...7,565,834
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:14718719 RGD:1580316 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Trpm8 transient receptor potential cation channel, subfamily M, member 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22683712 NCBI chr 1:88,234,457...88,318,909
Ensembl chr 1:88,205,383...88,317,015
JBrowse link
Retinal Dystrophy, Optic Nerve Edema, Splenomegaly, Anhidrosis, and Migraine Headache Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpk1 alpha-kinase 1 ISO ClinVar Annotator: match by term: ALPK1-related condition | ClinVar Annotator: match by term: Retinal dystrophy, optic nerve edema, splenomegaly, anhidrosis, and migraine headache syndrome OMIM
ClinVar
PMID:25741868 PMID:28492532 PMID:30967659 PMID:31053777 PMID:31939038 More... NCBI chr 3:127,460,367...127,574,195
Ensembl chr 3:127,463,959...127,574,176
JBrowse link
Sensorineural Deafness and Migraine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G mt-Tq tRNA glutamine, mitochondrial ISO ClinVar Annotator: match by term: Sensorineural deafness and migraine ClinVar PMID:11424923 PMID:20700462 PMID:21526175 PMID:25741868 PMID:26467025 More... NCBI chr MT:3,772...3,842
Ensembl chr MT:3,772...3,842
JBrowse link
Sporadic Hemiplegic Migraine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit ISO ClinVar Annotator: match by term: Sporadic hemiplegic migraine ClinVar PMID:10408534 PMID:10734061 PMID:11176968 PMID:11439943 PMID:12056940 More... NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875
JBrowse link
Stormorken syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgap2 post-GPI attachment to proteins 2 ISO ClinVar Annotator: match by term: Stormorken syndrome ClinVar PMID:28492532 NCBI chr 7:101,859,153...101,887,771
Ensembl chr 7:101,859,415...101,887,774
JBrowse link
G Rhog ras homolog family member G ISO ClinVar Annotator: match by term: Stormorken syndrome ClinVar PMID:28492532 NCBI chr 7:101,888,330...101,899,325
Ensembl chr 7:101,888,330...101,905,261
JBrowse link
G Stim1 stromal interaction molecule 1 ISO ClinVar Annotator: match by term: Stormorken syndrome OMIM
ClinVar
PMID:4085141 PMID:9536098 PMID:12623447 PMID:12745453 PMID:12944247 More... NCBI chr 7:101,909,279...102,086,525
Ensembl chr 7:101,917,013...102,086,526
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18296
    disease of anatomical entity 15613
      nervous system disease 13469
        central nervous system disease 12052
          brain disease 11311
            Headache Disorders 66
              Primary Headache Disorders 66
                migraine 65
                  Alice in Wonderland Syndrome 0
                  Familial Basilar Migraine 1
                  Ophthalmoplegic Migraine 0
                  Retinal Dystrophy, Optic Nerve Edema, Splenomegaly, Anhidrosis, and Migraine Headache Syndrome 1
                  Sensorineural Deafness and Migraine 1
                  Stormorken syndrome 3
                  migraine with aura + 21
                  migraine without aura + 12
paths to the root