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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:choroid plexus carcinoma
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Accession:DOID:5648 term browser browse the term
Definition:A choroid plexus cancer that has_material_basis_in epithelial cells of the choroid plexus. (DO)
Synonyms:exact_synonym: cancer of Choroid Plexus;   malignant neoplasm of choroid plexus;   malignant neoplasm of the Choroid Plexus
 related_synonym: malignant tumor of choroid plexus
 primary_id: MESH:C562943;   RDO:0012443
 xref: GARD:8238;   NCI:C4533;   NCI:C4715
For additional species annotation, visit the Alliance of Genome Resources.


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choroid plexus carcinoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxo3 forkhead box O3 ISO ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Nf2 neurofibromin 2 ISO ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523
JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 ISO ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr17:9,840,859...9,955,391
Ensembl chr17:9,844,133...9,952,898
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:1631137 PMID:1978757 PMID:8099841 PMID:8425176 PMID:8527048 PMID:9242456 PMID:9598730 PMID:9825943 PMID:11051239 PMID:12826609 PMID:16489069 PMID:17417627 PMID:17427234 PMID:17606709 PMID:18762572 PMID:19378321 PMID:20013323 PMID:20128691 PMID:20522432 PMID:21343334 PMID:22265402 PMID:22713868 PMID:23172776 PMID:23667202 PMID:23950206 PMID:24033266 PMID:24038938 PMID:24573247 PMID:24603336 PMID:24651015 PMID:25157968 PMID:25584008 PMID:25741868 PMID:25925845 PMID:26467025 PMID:26619011 PMID:26787237 PMID:27374712 PMID:28472496 PMID:28492532 PMID:28724667 PMID:29025599 PMID:31775759 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17150
    disease of cellular proliferation 6946
      cancer 4896
        cell type cancer 3395
          carcinoma 2914
            choroid plexus carcinoma 4
Path 2
Term Annotations click to browse term
  disease 17150
    disease of cellular proliferation 6946
      Neoplasms by Site 6588
        Nervous System Neoplasms 1688
          Central Nervous System Neoplasms 1366
            central nervous system cancer 735
              brain cancer 702
                supratentorial cancer 440
                  cerebrum cancer 388
                    cerebral ventricle cancer 9
                      choroid plexus cancer 4
                        choroid plexus carcinoma 4
paths to the root