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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:small intestine adenocarcinoma
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Accession:DOID:4906 term browser browse the term
Definition:A small intestine carcinoma that derives_from epithelial cells of glandular origin. (DO)
Synonyms:exact_synonym: small intestinal adenocarcinoma
 related_synonym: adenocarcinoma of small Intestine
 primary_id: RDO:9002553
 xref: GARD:13090;   NCI:C7888
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
small intestine adenocarcinoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gstm1 glutathione S-transferase mu 1 ISO RGD PMID:12940438 RGD:14700963 NCBI chr 2:210,803,869...210,809,461
Ensembl chr 2:210,803,869...210,809,306
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 ISO RGD PMID:19014680 RGD:13464351 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 ISO RGD PMID:19014680 RGD:13464351 NCBI chr 7:11,458,971...11,478,520
Ensembl chr 7:11,458,967...11,478,489
JBrowse link
duodenum adenocarcinoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Duodenal adenocarcinoma ClinVar PMID:24033266 PMID:25741868 PMID:26530882 PMID:28195569 PMID:28492532 PMID:30111351 PMID:30833958 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17014
    disease of cellular proliferation 6936
      cancer 4887
        cell type cancer 3390
          carcinoma 2909
            adenocarcinoma 1467
              small intestine adenocarcinoma 4
                duodenum adenocarcinoma + 1
Path 2
Term Annotations click to browse term
  disease 17014
    disease of anatomical entity 16363
      gastrointestinal system disease 5751
        Digestive System Neoplasms 3103
          Gastrointestinal Neoplasms 2976
            Intestinal Neoplasms 1165
              intestinal cancer 741
                small intestine cancer 7
                  small intestine carcinoma 6
                    small intestine adenocarcinoma 4
                      duodenum adenocarcinoma + 1
paths to the root