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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:adenosquamous carcinoma
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Accession:DOID:4830 term browser browse the term
Definition:A squamous cell carcinoma that contains squamous cells and gland-like cells. (DO)
Synonyms:exact_synonym: adenosquamous carcinomas;   adenosquamous cell carcinoma;   mixed adenocarcinoma and squamous carcinoma
 primary_id: MESH:D018196
 xref: EFO:1000073;   NCI:C3727
For additional species annotation, visit the Alliance of Genome Resources.


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adenosquamous gallbladder carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr2 discoidin domain receptor tyrosine kinase 2 disease_progression ISO RGD PMID:29043607 RGD:150429712 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 disease_progression ISO RGD PMID:29043607 RGD:150429712 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169 		JBrowse link
adenosquamous lung carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ttr transthyretin ISO protein:increased expression:lung (human) RGD PMID:26943652 RGD:151665207 NCBI chr18:11,941,791...11,951,008
Ensembl chr18:11,943,789...11,951,008 		JBrowse link
pancreatic adenosquamous carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb2 transforming growth factor, beta 2 ameliorates ISO human cells in a mouse model RGD PMID:21366804 RGD:155630611 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 21128
    disease of cellular proliferation 7667
      Neoplasms by Histologic Type 5258
        Complex and Mixed Neoplasms 356
          adenosquamous carcinoma 4
            Bartholin's gland adenosquamous carcinoma 0
            adenosquamous bile duct carcinoma + 0
            adenosquamous breast carcinoma 0
            adenosquamous colon carcinoma 0
            adenosquamous gallbladder carcinoma 2
            adenosquamous lung carcinoma 1
            adenosquamous prostate carcinoma 0
            cervical adenosquamous carcinoma + 0
            endometrial adenosquamous carcinoma 0
            esophageal adenosquamous carcinoma 0
            gastric adenosquamous carcinoma 0
            pancreatic adenosquamous carcinoma 1
            thymus adenosquamous carcinoma 0
Path 2
Term Annotations click to browse term
  disease 21128
    disease of cellular proliferation 7667
      cancer 5483
        cell type cancer 3731
          carcinoma 3200
            squamous cell carcinoma 643
              adenosquamous carcinoma 4
                Bartholin's gland adenosquamous carcinoma 0
                adenosquamous bile duct carcinoma + 0
                adenosquamous breast carcinoma 0
                adenosquamous colon carcinoma 0
                adenosquamous gallbladder carcinoma 2
                adenosquamous lung carcinoma 1
                adenosquamous prostate carcinoma 0
                cervical adenosquamous carcinoma + 0
                endometrial adenosquamous carcinoma 0
                esophageal adenosquamous carcinoma 0
                gastric adenosquamous carcinoma 0
                pancreatic adenosquamous carcinoma 1
                thymus adenosquamous carcinoma 0
paths to the root