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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:clear cell adenocarcinoma
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Accession:DOID:4468 term browser browse the term
Definition:An adenocarcinoma that derives_from epithelial cells which have clear cytoplasm. (DO)
Synonyms:exact_synonym: Wolffian duct neoplasm;   clear cell adenocarcinomas;   malignant mesonephroma;   mesonephroid clear cell carcinoma;   water-clear cell adenocarcinoma;   water-clear cell carcinoma
 primary_id: MESH:D018262
 xref: NCI:C36815;   NCI:C3766;   NCI:C4072;   NCI:C4156
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
clear cell adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:9754764 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Cbx7 chromobox 7 disease_progression ISO RGD PMID:24375438 RGD:9587359 NCBI chr 7:121,136,067...121,153,503
Ensembl chr 7:121,136,058...121,153,383
JBrowse link
G Daxx death-domain associated protein ISO protein:increased expression:ovary: RGD PMID:23539629 RGD:9587820 NCBI chr20:5,480,103...5,485,962
Ensembl chr20:5,480,103...5,485,926
JBrowse link
G Tp53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9754764 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17014
    disease of cellular proliferation 6936
      Neoplasms by Histologic Type 4454
        Germ Cell and Embryonal Neoplasms 736
          Mesonephroma 10
            clear cell adenocarcinoma 4
              bile duct clear cell adenocarcinoma + 0
              bladder clear cell adenocarcinoma + 0
              cervical clear cell adenocarcinoma 0
              endometrial clear cell adenocarcinoma 0
              fallopian tube clear cell adenocarcinoma 0
              ovarian clear cell adenocarcinoma 0
              urethra clear cell adenocarcinoma 0
              uterine ligament clear cell adenocarcinoma 0
Path 2
Term Annotations click to browse term
  disease 17014
    disease of cellular proliferation 6936
      cancer 4887
        cell type cancer 3390
          carcinoma 2909
            adenocarcinoma 1467
              clear cell adenocarcinoma 4
                bile duct clear cell adenocarcinoma + 0
                bladder clear cell adenocarcinoma + 0
                cervical clear cell adenocarcinoma 0
                endometrial clear cell adenocarcinoma 0
                fallopian tube clear cell adenocarcinoma 0
                ovarian clear cell adenocarcinoma 0
                urethra clear cell adenocarcinoma 0
                uterine ligament clear cell adenocarcinoma 0
paths to the root