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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:clear cell sarcoma
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Accession:DOID:4233 term browser browse the term
Definition:A sarcoma that is characterized by solid nests and fascicles of tumor cells with clear cytoplasm and prominent nucleoli. It presents as a slow growing mass that especially affects tendons and aponeuroses and it is deeply situated. (DO)
Synonyms:exact_synonym: Clear Cell Sarcomas;   adult soft part clear cell sarcoma;   clear cell sarcoma of soft parts;   malignant melanoma of soft parts;   malignant melanoma of soft tissues
 primary_id: MESH:D018227
 xref: NCI:C27370;   NCI:C3745
For additional species annotation, visit the Alliance of Genome Resources.


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clear cell sarcoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCOR BCL6 corepressor EXP CTD Direct Evidence: marker/mechanism CTD PMID:26098867 NCBI chr  X:40,051,246...40,177,329
Ensembl chr  X:40,049,815...40,177,329 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 22089
    disease of cellular proliferation 8443
      cancer 5852
        cell type cancer 4015
          sarcoma 264
            clear cell sarcoma 1
              kidney clear cell sarcoma 0
paths to the root