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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:bladder urothelial carcinoma
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Accession:DOID:4006 term browser browse the term
Definition:A bladder carcinoma that has_material_basis_in transitional cells located_in the lining of the bladder. (DO)
Synonyms:related_synonym: bladder transitional cell carcinoma;   transitional cell carcinoma of bladder;   urinary bladder urothelial carcinoma
 xref: EFO:0006544;   NCI:C39851
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
bladder urothelial carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl7a actin-like 7a ISO RGD PMID:29058301 RGD:13831338 NCBI chr 5:71,447,447...71,450,440
Ensembl chr 5:71,447,071...71,450,908
JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 disease_progression ISO mRNA:increased expression:urinary bladder (human) RGD PMID:31964418 RGD:153344516 NCBI chr10:103,072,530...103,081,382
Ensembl chr10:103,073,408...103,081,380
JBrowse link
G Birc7 baculoviral IAP repeat-containing 7 disease_progression ISO mRNA:increased expression:urinary bladder (human) RGD PMID:31964418 RGD:153344516 NCBI chr 3:168,047,824...168,052,606
Ensembl chr 3:168,047,824...168,052,606
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 severity ISO protein:increased expression:urothelial cells (human) RGD PMID:28507621 RGD:38500205 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Kdm6a lysine demethylase 6A susceptibility ISO associated with upper tract urothelial carcinoma; DNA:mutations:multiple: (human) RGD PMID:30352907 RGD:150429735 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 21120
    disease of cellular proliferation 7671
      cancer 5497
        cell type cancer 3756
          carcinoma 3199
            transitional cell carcinoma 139
              bladder urothelial carcinoma 5
                bladder urachal urothelial carcinoma 0
                bladder urothelial papillary carcinoma 0
                invasive bladder transitional cell carcinoma + 0
                non-invasive bladder urothelial carcinoma 0
Path 2
Term Annotations click to browse term
  disease 21120
    disease of anatomical entity 18195
      Urogenital Diseases 5193
        Urogenital Neoplasms 2192
          Urologic Neoplasms 733
            Urinary Bladder Neoplasm 307
              urinary bladder cancer 307
                bladder carcinoma 9
                  bladder urothelial carcinoma 5
                    bladder urachal urothelial carcinoma 0
                    bladder urothelial papillary carcinoma 0
                    invasive bladder transitional cell carcinoma + 0
                    non-invasive bladder urothelial carcinoma 0
paths to the root