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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:ovarian carcinoma
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Accession:DOID:4001 term browser browse the term
Definition:An ovarian cancer that has_material_basis_in epithelial tissue and is located_in the ovary. (DO)
Synonyms:narrow_synonym: undifferentiated ovarian carcinoma
 related_synonym: epithelial ovarian carcinoma
 primary_id: MESH:D000077216
 xref: EFO:0001075;   EFO:1000605;   NCI:C4908
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
ovarian carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr 2:26,732,508...26,754,973
Ensembl chr 2:26,732,515...26,754,991 		JBrowse link
G Ager advanced glycosylation end product-specific receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr17:34,816,545...34,819,911
Ensembl chr17:34,816,836...34,819,910 		JBrowse link
G Akt2 thymoma viral proto-oncogene 2 ISO DNA:amplification (human) RGD PMID:16721043 RGD:2315603 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G Amh anti-Mullerian hormone treatment ISO RGD PMID:16533786 RGD:2315652 NCBI chr10:80,641,074...80,643,513
Ensembl chr10:80,641,077...80,643,482 		JBrowse link
G Atad5 ATPase family, AAA domain containing 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr11:79,980,205...80,026,623
Ensembl chr11:79,980,226...80,026,620 		JBrowse link
G Atm ataxia telangiectasia mutated ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:10330348 PMID:10817650 PMID:16461462 PMID:17124347 PMID:23807571 More... NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO protein:increased expression:ovary RGD PMID:15277215 RGD:2289032 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Brca1 breast cancer 1, early onset ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:7894493 PMID:8808710 PMID:9150154 PMID:10227398 PMID:10389907 More... NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781 		JBrowse link
G Cabin1 calcineurin binding protein 1 ISO DNA:hypermethylation: : RGD PMID:18757082 RGD:10054392 NCBI chr10:75,481,944...75,600,194
Ensembl chr10:75,481,946...75,600,175 		JBrowse link
G Camk2n1 calcium/calmodulin-dependent protein kinase II inhibitor 1 treatment ISO RGD PMID:26910918 RGD:18337281 NCBI chr 4:138,182,459...138,187,437
Ensembl chr 4:138,181,625...138,187,434 		JBrowse link
G Casp6 caspase 6 ISO RGD PMID:17283169 RGD:2301336 NCBI chr 3:129,695,064...129,707,761
Ensembl chr 3:129,695,074...129,707,752 		JBrowse link
G Cav1 caveolin 1, caveolae protein ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:35622184 PMID:11032026 RGD:2289113 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451 		JBrowse link
G Ccn2 cellular communication network factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581 		JBrowse link
G Ccnd1 cyclin D1 treatment ISO RGD PMID:18025280 RGD:2296036 NCBI chr 7:144,483,668...144,493,568
Ensembl chr 7:144,483,668...144,493,662 		JBrowse link
G Ccne1 cyclin E1 ISO protein:increased expression:ovary RGD PMID:12713563 RGD:2289335 NCBI chr 7:37,797,409...37,806,915
Ensembl chr 7:37,797,409...37,806,959 		JBrowse link
G Ccng1 cyclin G1 ISO mRNA:increased expression:ovary (human) RGD PMID:26872615 RGD:11555725 NCBI chr11:40,639,379...40,646,044
Ensembl chr11:40,639,379...40,646,138 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 ISO protein:increased expression:peritoneal fluid, leukocyte (human) RGD PMID:11948121 RGD:4892092 NCBI chr 9:123,921,557...123,934,153
Ensembl chr 9:123,921,580...123,947,736 		JBrowse link
G Chek2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:16199547 PMID:21876083 PMID:24713400 PMID:28492532 NCBI chr 5:110,987,668...111,022,006
Ensembl chr 5:110,987,845...111,022,011 		JBrowse link
G Cldn7 claudin 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21134740 NCBI chr11:69,855,605...69,858,712
Ensembl chr11:69,855,605...69,858,711 		JBrowse link
G Dusp1 dual specificity phosphatase 1 disease_progression ISO RGD PMID:12432554 RGD:2298695 NCBI chr17:26,724,565...26,727,446
Ensembl chr17:26,724,564...26,781,102 		JBrowse link
G Edn1 endothelin 1 ISO mRNA, protein:increased expression:ovarian tumor (human) RGD PMID:9973223 RGD:4144954 NCBI chr13:42,454,952...42,461,466
Ensembl chr13:42,454,952...42,461,466 		JBrowse link
G Ehmt2 euchromatic histone lysine N-methyltransferase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25115793 NCBI chr17:35,117,427...35,133,049
Ensembl chr17:35,117,445...35,133,028 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Fos FBJ osteosarcoma oncogene ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr12:85,520,664...85,524,048
Ensembl chr12:85,520,664...85,524,047 		JBrowse link
G Glra3 glycine receptor, alpha 3 subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 8:56,393,454...56,583,111
Ensembl chr 8:56,393,495...56,583,105 		JBrowse link
G Gpx6 glutathione peroxidase 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr13:21,479,635...21,503,795
Ensembl chr13:21,496,295...21,503,794 		JBrowse link
G Gstm1 glutathione S-transferase, mu 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:31569996 NCBI chr 3:107,919,566...107,925,289
Ensembl chr 3:107,919,571...107,925,289 		JBrowse link
G Gstt1 glutathione S-transferase, theta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:31569996 NCBI chr10:75,619,647...75,634,418
Ensembl chr10:75,619,647...75,634,418 		JBrowse link
G Hdac3 histone deacetylase 3 disease_progression ISO RGD PMID:18714364 RGD:2306205 NCBI chr18:38,070,024...38,088,073
Ensembl chr18:38,068,897...38,088,069 		JBrowse link
G Il13 interleukin 13 ISO RGD PMID:14984938 RGD:2290344 NCBI chr11:53,522,150...53,525,529
Ensembl chr11:53,522,151...53,525,529 		JBrowse link
G Kiss1 KiSS-1 metastasis-suppressor disease_progression ISO RGD PMID:18005407 RGD:2302169 NCBI chr 1:133,249,625...133,257,460
Ensembl chr 1:133,237,565...133,257,460
Ensembl chr 1:133,237,565...133,257,460 		JBrowse link
G Klk13 kallikrein related-peptidase 13 ISO mRNA:increased expression:ovary RGD PMID:19707197 RGD:2314862 NCBI chr 7:43,361,991...43,377,288
Ensembl chr 7:43,361,991...43,376,958 		JBrowse link
G Kpnb1 karyopherin subunit beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr11:97,050,536...97,078,718
Ensembl chr11:97,050,540...97,078,707 		JBrowse link
G L1cam L1 cell adhesion molecule severity ISO protein:increased expression:ovary, serum (human)
human cells, mouse model		 RGD PMID:13678974 PMID:16424028 RGD:6483445, RGD:6483449 NCBI chr  X:72,897,384...72,924,843
Ensembl chr  X:72,897,384...72,939,711 		JBrowse link
G Letmd1 LETM1 domain containing 1 ISO mRNA, protein:increased expression:ovary RGD PMID:12879013 RGD:2314918 NCBI chr15:100,360,302...100,377,133
Ensembl chr15:100,366,904...100,377,045 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:12644821 RGD:2306053 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 disease_progression ISO expression of the human gene inhibits metastatic colonization of secondary sites by cancer cells in the SKOV3ip.1 cell line model system RGD PMID:16489030 RGD:2293338 NCBI chr11:110,289,928...110,416,348
Ensembl chr11:110,289,948...110,416,348 		JBrowse link
G Mdh2 malate dehydrogenase 2, NAD (mitochondrial) ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 5:135,807,503...135,819,240
Ensembl chr 5:135,807,334...135,819,252 		JBrowse link
G Mir145a microRNA 145a ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr18:61,780,896...61,780,965
Ensembl chr18:61,780,896...61,780,965 		JBrowse link
G Mir17 microRNA 17 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr14:115,281,103...115,281,186
Ensembl chr14:115,281,103...115,281,186 		JBrowse link
G Mir23b microRNA 23b treatment ISO human cells in mouse model RGD PMID:26872615 RGD:11555725 NCBI chr13:63,448,298...63,448,371
Ensembl chr13:63,448,298...63,448,371 		JBrowse link
G Mir376c microRNA 376c ISO CTD Direct Evidence: marker/mechanism CTD PMID:21224400 NCBI chr12:109,689,152...109,689,237
Ensembl chr12:109,689,152...109,689,237 		JBrowse link
G Mir98 microRNA 98 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr  X:150,696,210...150,696,317
Ensembl chr  X:150,696,210...150,696,317 		JBrowse link
G Mmp13 matrix metallopeptidase 13 disease_progression ISO DNA:polymorphism:promoter RGD PMID:12974393 PMID:19258954 RGD:2306083, RGD:2306074 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331 		JBrowse link
G Msh6 mutS homolog 6 ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:18269114 PMID:20028993 PMID:24362816 PMID:25741868 PMID:26467025 More... NCBI chr17:88,282,478...88,298,320
Ensembl chr17:88,282,490...88,298,320 		JBrowse link
G mt-Cytb cytochrome b, mitochondrial ISO DNA:polymorphisms, nonsense mutation RGD PMID:11507041 RGD:2298954 NCBI chr MT:14,145...15,288
Ensembl chr MT:14,145...15,288 		JBrowse link
G Mtmr14 myotubularin related protein 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr 6:113,214,596...113,258,353
Ensembl chr 6:113,214,804...113,258,353 		JBrowse link
G Mtus1 mitochondrial tumor suppressor 1 ISO mRNA:decreased expression:ovarian carcinoma (human) RGD PMID:16270321 RGD:2317019 NCBI chr 8:41,443,949...41,587,318
Ensembl chr 8:41,443,951...41,586,763 		JBrowse link
G Muc16 mucin 16 ISO RGD PMID:20356397 RGD:2325203 NCBI chr 9:18,406,741...18,586,117
Ensembl chr 9:18,406,751...18,585,826 		JBrowse link
G Mutyh mutY DNA glycosylase ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:11818965 PMID:12606733 PMID:12917422 PMID:15036665 PMID:15635083 More... NCBI chr 4:116,664,846...116,676,641
Ensembl chr 4:116,664,920...116,676,637 		JBrowse link
G Nbn nibrin ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:9590180 PMID:16415040 PMID:25741868 PMID:28492532 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Ncoa4 nuclear receptor coactivator 4 ISO mRNA:increased expression:ovary RGD PMID:11161850 RGD:2293537 NCBI chr14:31,881,884...31,901,210
Ensembl chr14:31,881,822...31,901,812 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:7907945 RGD:2299073 NCBI chr11:93,840,640...93,847,082
Ensembl chr11:93,840,640...93,847,085 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 severity ISO protein:increased expression:ovary RGD PMID:17533742 RGD:2299164 NCBI chr 7:97,437,748...97,561,588
Ensembl chr 7:97,437,748...97,561,588 		JBrowse link
G Palb2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:17200671 PMID:20927582 PMID:21165770 PMID:21365267 PMID:25741868 More... NCBI chr 7:121,706,485...121,732,203
Ensembl chr 7:121,706,485...121,732,208 		JBrowse link
G Phf21a PHD finger protein 21A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 2:92,014,096...92,195,011
Ensembl chr 2:92,014,451...92,195,011 		JBrowse link
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr 3:136,375,778...136,643,488
Ensembl chr 3:136,375,885...136,643,488 		JBrowse link
G Prkca protein kinase C, alpha severity ISO RGD PMID:12888898 RGD:2292460 NCBI chr11:107,824,213...108,237,360
Ensembl chr11:107,824,213...108,234,754 		JBrowse link
G Prkci protein kinase C, iota disease_progression ISO RGD PMID:12888898 RGD:2292460 NCBI chr 3:31,049,893...31,106,889
Ensembl chr 3:31,049,896...31,107,108 		JBrowse link
G Ptk2 PTK2 protein tyrosine kinase 2 ISO protein:increased expression:ovary
protein:increased tyrosine phosphorylation:ovary		 RGD PMID:10526262 PMID:15455382 RGD:2292572, RGD:2292563 NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129 		JBrowse link
G Rad51d RAD51 paralog D ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:16199547 PMID:21822267 PMID:25741868 PMID:26720727 PMID:26720728 More... NCBI chr11:82,762,786...82,781,571
Ensembl chr11:82,767,260...82,781,440 		JBrowse link
G Raf1 v-raf-leukemia viral oncogene 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 6:115,595,530...115,653,596
Ensembl chr 6:115,595,028...115,653,596 		JBrowse link
G Rhoa ras homolog family member A disease_progression ISO mRNA, protein:increased expression:ovary RGD PMID:12808121 RGD:2298873 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133 		JBrowse link
G Rhoc ras homolog family member C ISO mRNA:increased expression:ovary RGD PMID:12808121 RGD:2298873 NCBI chr 3:104,696,350...104,701,775
Ensembl chr 3:104,695,691...104,701,775 		JBrowse link
G Rspo1 R-spondin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr 4:124,880,197...124,902,895
Ensembl chr 4:124,880,223...124,902,892 		JBrowse link
G Six1 sine oculis-related homeobox 1 severity ISO mRNA:increased expression:female gonad (human) RGD PMID:17409410 RGD:11561962 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Smad2 SMAD family member 2 ISO RGD PMID:14985451 RGD:2299967 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO DNA:hypermethylation RGD PMID:15361843 RGD:2298907 NCBI chr16:10,601,672...10,603,400
Ensembl chr16:10,600,104...10,603,400 		JBrowse link
G Socs2 suppressor of cytokine signaling 2 ISO DNA:hypermethylation RGD PMID:15361843 RGD:2298907 NCBI chr10:95,219,765...95,253,176
Ensembl chr10:95,221,224...95,253,042 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr11:97,253,044...97,289,368
Ensembl chr11:97,253,261...97,289,368 		JBrowse link
G Stk11 serine/threonine kinase 11 susceptibility ISO DNA:loss of heterozygosity, missense mutation:p.P281L RGD PMID:10429654 RGD:2298556 NCBI chr10:79,951,602...79,966,513
Ensembl chr10:79,951,637...79,966,516 		JBrowse link
G Stn1 STN1, CST complex subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28346442 NCBI chr19:47,489,470...47,534,284
Ensembl chr19:47,489,472...47,525,946 		JBrowse link
G Synpo2 synaptopodin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr 3:122,870,168...123,029,817
Ensembl chr 3:122,870,168...123,029,798 		JBrowse link
G Tff1 trefoil factor 1 ISO RGD PMID:9066601 RGD:2292004 NCBI chr17:31,380,369...31,384,034
Ensembl chr17:31,380,369...31,384,251 		JBrowse link
G Timp4 tissue inhibitor of metalloproteinase 4 disease_progression ISO protein:increased expression:ovary RGD PMID:17009974 RGD:2290414 NCBI chr 6:115,221,405...115,229,166
Ensembl chr 6:115,218,853...115,229,166 		JBrowse link
G Tmt1b thiol methyltransferase 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr10:128,794,146...128,796,857
Ensembl chr10:128,794,143...128,796,857 		JBrowse link
G Trp53 transformation related protein 53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25535366 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Usp32 ubiquitin specific peptidase 32 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr11:84,875,263...85,031,107
Ensembl chr11:84,875,268...85,030,987 		JBrowse link
G Vegfd vascular endothelial growth factor D disease_progression ISO RGD PMID:18343598 RGD:2315478 NCBI chr  X:163,156,282...163,185,643
Ensembl chr  X:163,156,374...163,185,646 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
familiar ovarian carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C ISO ClinVar Annotator: match by term: Familial ovarian carcinoma ClinVar PMID:25741868 PMID:33832919 NCBI chr11:87,267,471...87,295,780
Ensembl chr11:87,267,471...87,295,780 		JBrowse link
ovarian clear cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A treatment ISO human cell in mouse model RGD PMID:21900401 RGD:126725086 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
ovarian serous carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef10l Rho guanine nucleotide exchange factor 10-like susceptibility ISO DNA:SNP:intron:rs10788679(human) RGD PMID:29979793 RGD:14348955 NCBI chr 4:140,241,796...140,393,318
Ensembl chr 4:140,241,796...140,393,323 		JBrowse link
G Ccng1 cyclin G1 severity ISO mRNA, protein:increased expression:ovary (human) RGD PMID:30565428 RGD:151361205 NCBI chr11:40,639,379...40,646,044
Ensembl chr11:40,639,379...40,646,138 		JBrowse link
G Map2k4 mitogen-activated protein kinase kinase 4 ISO ovarian serous carcinoma RGD PMID:16627982 RGD:2293332 NCBI chr11:65,579,070...65,679,185
Ensembl chr11:65,579,069...65,679,123 		JBrowse link
G Ncam1 neural cell adhesion molecule 1 disease_progression ISO RGD PMID:25455994 RGD:40907066 NCBI chr 9:49,413,434...49,710,909
Ensembl chr 9:49,413,436...49,710,225 		JBrowse link
G Pten phosphatase and tensin homolog exacerbates ISO protein:increased expression:ovary, peritoneum (human) RGD PMID:26166715 RGD:11532228 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Wt1 WT1 transcription factor ISO RGD PMID:19856421 RGD:2315539 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
ovarian serous cystadenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:26619011 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564 		JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 exacerbates ISO mRNA:increased expression:ovary (human) RGD PMID:31964418 RGD:153344516 NCBI chr 9:7,848,698...7,873,199
Ensembl chr 9:7,848,700...7,873,187 		JBrowse link
G Braf Braf transforming gene ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:24033266 PMID:24446311 PMID:25157968 PMID:25741868 PMID:26619011 More... NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:22908275 PMID:26619011 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:25741868 PMID:26619011 NCBI chr 3:84,721,901...84,886,505
Ensembl chr 3:84,722,575...84,886,505 		JBrowse link
G Hras Harvey rat sarcoma virus oncogene ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr 7:140,770,839...140,773,938
Ensembl chr 7:140,769,018...140,773,918 		JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr 7:140,774,024...140,789,968
Ensembl chr 7:140,774,070...140,789,968 		JBrowse link
G Nras neuroblastoma ras oncogene ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:1654209 PMID:2278970 PMID:2674680 PMID:3122217 PMID:6587382 More... NCBI chr 3:102,965,643...102,975,230
Ensembl chr 3:102,965,601...102,975,230 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635 		JBrowse link
G Ppp2r1a protein phosphatase 2, regulatory subunit A, alpha ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:25741868 PMID:26168268 PMID:26619011 PMID:28492532 PMID:31687265 More... NCBI chr17:21,165,716...21,186,167
Ensembl chr17:21,165,573...21,186,178 		JBrowse link
G Trp53 transformation related protein 53 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:124622 PMID:253702 PMID:960674 PMID:1349175 PMID:1359493 More... NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
ovarian small cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO ClinVar Annotator: match by term: Small cell carcinoma of the ovary, hypercalcemic type ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Trp53 transformation related protein 53 ISO ClinVar Annotator: match by term: Small cell carcinoma of the ovary, hypercalcemic type ClinVar NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
ovary adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd3 cyclin D3 disease_progression ISO RGD PMID:17885491 RGD:2316011 NCBI chr17:47,815,976...47,910,614
Ensembl chr17:47,815,976...47,910,616 		JBrowse link
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 ISO mRNA:increased expression:ovary (human) RGD PMID:16180015 RGD:151361183 NCBI chr 2:170,324,877...170,339,065
Ensembl chr 2:170,324,628...170,339,065 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Ovarian adenocarcinoma ClinVar PMID:15457249 PMID:18339846 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Pramex1 PRAME like, X-linked 1 severity ISO mRNA, protein:increased expression:female gonad (human) RGD PMID:18709641 RGD:11535054 NCBI chr  X:134,513,662...134,528,437
Ensembl chr  X:134,513,751...134,528,454 		JBrowse link
ovary serous adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Brca1 breast cancer 1, early onset ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16084575 PMID:16455195 PMID:16949048 PMID:17100994 PMID:19656164 More... NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781 		JBrowse link
G Brca2 breast cancer 2, early onset ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16793542 PMID:18704680 PMID:25741868 NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794 		JBrowse link
G Bsg basigin ISO protein:increased expression:ovary RGD PMID:16633062 RGD:2289053 NCBI chr10:79,540,192...79,547,813
Ensembl chr10:79,540,325...79,547,803 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar PMID:2278970 PMID:3122217 PMID:7773929 PMID:8439212 PMID:12460918 More... NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Trp53 transformation related protein 53 ISO DNA, protein:loss of heterozygosity, increased expression:ovary RGD PMID:1310251 RGD:2290540 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18301
    disease of cellular proliferation 7493
      cancer 5429
        cell type cancer 3732
          carcinoma 3199
            ovarian carcinoma 103
              familiar ovarian carcinoma 1
              ovarian clear cell carcinoma 1
              ovarian large-cell neuroendocrine carcinoma 0
              ovarian seromucinous carcinoma 0
              ovarian serous carcinoma 6
              ovarian small cell carcinoma + 2
              ovarian squamous cell carcinoma 0
              ovary adenocarcinoma + 19
              ovary papillary carcinoma 0
Path 2
Term Annotations click to browse term
  disease 18301
    disease of anatomical entity 15631
      Urogenital Diseases 4894
        Female Urogenital Diseases and Pregnancy Complications 2429
          Female Urogenital Diseases 1966
            female reproductive system disease 1963
              Adnexal Diseases 908
                ovarian disease 899
                  Ovarian Neoplasms 583
                    ovarian cancer 458
                      ovary epithelial cancer 127
                        malignant ovarian surface epithelial-stromal neoplasm 103
                          ovarian carcinoma 103
                            familiar ovarian carcinoma 1
                            ovarian clear cell carcinoma 1
                            ovarian large-cell neuroendocrine carcinoma 0
                            ovarian seromucinous carcinoma 0
                            ovarian serous carcinoma 6
                            ovarian small cell carcinoma + 2
                            ovarian squamous cell carcinoma 0
                            ovary adenocarcinoma + 19
                            ovary papillary carcinoma 0
paths to the root