Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Arenaviridae infectious disease
go back to main search page
Accession:DOID:3944 term browser browse the term
Definition:A viral infectious disease that results_in infection in rodents and humans, has_material_basis_in Arenaviridae viruses. (DO)
Synonyms:exact_synonym: Arenaviridae Infection;   Arenavirus Infection;   arenaviridae infections;   arenavirus infections
 primary_id: MESH:D001117
 xref: EFO:0007150
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
Arenaviridae infectious disease term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase ISO RGD PMID:21641396 RGD:126779561 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G CD1D CD1d molecule ISO RGD PMID:32153566 RGD:127345122 NCBI chr38:23,489,169...23,491,712 JBrowse link
G IL21 interleukin 21 ISO RGD PMID:21423809 RGD:127285543 NCBI chr19:17,641,833...17,651,275
Ensembl chr19:17,641,833...17,651,266 		JBrowse link
G IL27 interleukin 27 ISO mRNA, protein:increased expression:spleen (mouse) RGD PMID:29593047 RGD:126790521 NCBI chr 6:18,243,988...18,248,369
Ensembl chr 6:18,244,040...18,247,635 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO RGD PMID:11927625 RGD:150340679 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401 		JBrowse link
G STAT2 signal transducer and activator of transcription 2 ameliorates ISO RGD PMID:15723812 RGD:41789630 NCBI chr10:641,543...660,882
Ensembl chr10:642,718...658,546 		JBrowse link
G TFRC transferrin receptor ISO CTD Direct Evidence: therapeutic CTD PMID:17287727 NCBI chr33:29,206,024...29,237,221
Ensembl chr33:29,208,609...29,238,242 		JBrowse link
Lassa fever term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAG1 dystroglycan 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17287727 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
lymphocytic choriomeningitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD274 CD274 molecule ISO RGD PMID:23230000 RGD:41410802 NCBI chr 1:93,461,735...93,605,772
Ensembl chr 1:93,585,518...93,603,522 		JBrowse link
G CLEC12A C-type lectin domain family 12 member A disease_progression ISO RGD PMID:31451663 RGD:41412202 NCBI chr27:36,040,574...36,051,249
Ensembl chr27:36,040,577...36,051,184 		JBrowse link
G IFNAR1 interferon alpha and beta receptor subunit 1 disease_progression ISO DNA:mutation: : RGD PMID:24760883 PMID:28878077 RGD:124715467 RGD:124715479 NCBI chr31:28,854,765...28,876,399 JBrowse link
G IFNGR1 interferon gamma receptor 1 ameliorates ISO RGD PMID:22496215 RGD:124715469 NCBI chr 1:29,646,776...29,669,669
Ensembl chr 1:29,647,552...29,669,578 		JBrowse link
G IL1RL1 interleukin 1 receptor like 1 severity ISO RGD PMID:25829541 RGD:40400708 NCBI chr10:40,658,191...40,732,097
Ensembl chr10:40,659,041...40,677,357 		JBrowse link
G IL21R interleukin 21 receptor ISO RGD PMID:19478140 RGD:6892934 NCBI chr 6:19,181,846...19,217,915
Ensembl chr 6:19,182,071...19,217,931 		JBrowse link
G IRF7 interferon regulatory factor 7 disease_progression ISO RGD PMID:24760883 RGD:124715479
G IRF9 interferon regulatory factor 9 ameliorates
disease_progression		 ISO DNA:mutation: : RGD PMID:22496215 PMID:24760883 PMID:28878077 RGD:124715467 RGD:124715469 RGD:124715479 NCBI chr 8:4,152,146...4,157,201 JBrowse link
G NCR1 natural cytotoxicity triggering receptor 1 ISO RGD PMID:30995287 RGD:40818298 NCBI chr 1:102,686,058...102,690,350
Ensembl chr 1:102,686,058...102,690,620 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 severity ISO RGD PMID:20565293 RGD:40902858 NCBI chr32:23,948,598...24,040,704
Ensembl chr32:23,942,954...24,040,703 		JBrowse link
G NFKB2 nuclear factor kappa B subunit 2 disease_progression ISO RGD PMID:20565293 RGD:40902858 NCBI chr28:14,902,212...14,910,437
Ensembl chr28:14,902,706...14,910,395 		JBrowse link
G PDCD1 programmed cell death 1 treatment ISO RGD PMID:23230000 PMID:30726291 RGD:40818232 RGD:41410802 NCBI chr25:51,606,559...51,618,903
Ensembl chr25:51,608,173...51,618,723 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 exacerbates ISO RGD PMID:22496215 RGD:124715469 NCBI chr37:1,513,438...1,549,837
Ensembl chr37:1,507,219...1,550,178 		JBrowse link
G STAT2 signal transducer and activator of transcription 2 ISO RGD PMID:24760883 PMID:32094187 RGD:124715479 RGD:42722006 NCBI chr10:641,543...660,882
Ensembl chr10:642,718...658,546 		JBrowse link
G WAS WASP actin nucleation promoting factor ISO RGD PMID:23141740 RGD:38676258 NCBI chr  X:41,882,240...41,890,053
Ensembl chr  X:41,882,875...41,890,058 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17773
    disease by infectious agent 2127
      viral infectious disease 1623
        RNA Virus Infections 1362
          Arenaviridae infectious disease 22
            Arenavirus hemorrhagic fever + 0
            Bolivian hemorrhagic fever 0
            Lassa fever 1
            lymphocytic choriomeningitis 15
paths to the root