RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: cervical squamous cell carcinoma
Accession: DOID:3744
browse the term
Definition: A cervix carcinoma that has_material_basis_in squamous cells of the cervix. (DO)
Synonyms: exact_synonym: Squamous Cell Carcinoma Of Cervix; squamous cell carcinoma of the Cervix Uteri
primary_id: RDO:9001097
xref: EFO:1000022 ; EFO:1000172 ; NCI:C24077 ; NCI:C4028
For additional species annotation, visit the
Alliance of Genome Resources .
G
ADAR
adenosine deaminase RNA specific
disease_progression
ISO
protein:increased expression:cervix squamous epithelium (human)
RGD
PMID:28109322
RGD:125097518
NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999
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BAX
BCL2 associated X, apoptosis regulator
ISO
protein:increased expression:uterine cervix
RGD
PMID:17694953
RGD:1643352
NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464
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BIRC2
baculoviral IAP repeat containing 2
disease_progression
ISO
DNA, protein:amplification, increased expression:uterine cervix, nucleus
RGD
PMID:12208731
RGD:1643529
NCBI chr 5:29,294,080...29,314,837
Ensembl chr 5:29,294,692...29,312,771
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BRIP1
BRCA1 interacting helicase 1
severity
ISO
mRNA, protein:increased expression:uterine cervix, nucleus (human)
RGD
PMID:24708616
RGD:11252104
NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788
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CCL22
C-C motif chemokine ligand 22
severity
ISO
RGD
PMID:28086903
RGD:38455996
NCBI chr 2:59,039,650...59,045,519
Ensembl chr 2:59,040,539...59,045,625
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CCR4
C-C motif chemokine receptor 4
severity
ISO
RGD
PMID:28086903
RGD:38455996
NCBI chr23:3,844,072...3,847,770
Ensembl chr23:3,844,173...3,845,255
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CD82
CD82 molecule
ISO
protein:decreased expression:uterine cervix
RGD
PMID:15642213
RGD:2289399
NCBI chr18:44,658,414...44,707,897
Ensembl chr18:44,659,180...44,706,768
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CSF1R
colony stimulating factor 1 receptor
ISO
protein:increased expression:uterine cervix
RGD
PMID:18565574
RGD:2299119
NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510
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FGF7
fibroblast growth factor 7
ISO
cervical squamous cell carcinoma; mRNA:increased expression:cervical squamous cells
RGD
PMID:17306351
RGD:2289084
NCBI chr30:15,555,016...15,608,230
Ensembl chr30:15,555,266...15,606,521
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FGFR3
fibroblast growth factor receptor 3
no_association
ISO
DNA:missense mutation:cds: p.S249G (human)
RGD
PMID:11605053
RGD:38500202
NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896
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FOS
Fos proto-oncogene, AP-1 transcription factor subunit
disease_progression
ISO
protein:increased expression:uterine cervix
RGD
PMID:15514944
RGD:2293757
NCBI chr 8:48,330,856...48,334,273
Ensembl chr 8:48,331,026...48,333,467
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FOSL1
FOS like 1, AP-1 transcription factor subunit
ISO
protein:decreased expression:uterine cervix
RGD
PMID:15514944
RGD:2293757
NCBI chr18:51,366,719...51,374,411
Ensembl chr18:51,368,352...51,373,748
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FOXP3
forkhead box P3
severity
ISO
RGD
PMID:28086903
RGD:38455996
NCBI chr X:42,331,229...42,362,841
Ensembl chr X:42,344,108...42,350,758
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MIR21
microRNA mir-21
ISO
RNA:increased expression:cervical cell
RGD
PMID:26010154
RGD:41404529
NCBI chr 9:34,340,550...34,340,609
Ensembl chr 9:34,340,533...34,340,624
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MIR31
microRNA mir-31
ISO
RNA:increased expression:blood serum (human)
RGD
PMID:21658006
RGD:152998938
NCBI chr11:40,904,438...40,904,496
Ensembl chr11:40,904,437...40,904,503
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PDPN
podoplanin
disease_progression
ISO
RGD
PMID:16528371
RGD:2292237
NCBI chr 2:83,552,735...83,581,375
Ensembl chr 2:83,552,830...83,581,375
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SMAD3
SMAD family member 3
severity
ISO
RGD
PMID:28086903
RGD:38455996
NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337
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TIMP2
TIMP metallopeptidase inhibitor 2
ISO
protein:decreased expression:uterine cervix
RGD
PMID:16619570
RGD:2290402
NCBI chr 9:2,521,882...2,533,883
Ensembl chr 9:2,521,882...2,533,989
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TMBIM6
transmembrane BAX inhibitor motif containing 6
disease_progression
ISO
mRNA:increased expression:uterine cervix
RGD
PMID:15337562
RGD:2291959
NCBI chr27:4,921,606...4,944,830
Ensembl chr27:4,921,606...4,944,783
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TNFRSF4
TNF receptor superfamily member 4
severity
ISO
RGD
PMID:28086903
RGD:38455996
NCBI chr 5:56,401,410...56,404,410
Ensembl chr 5:56,401,384...56,404,761
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TNFSF4
TNF superfamily member 4
severity
ISO
RGD
PMID:28086903
RGD:38455996
NCBI chr 7:25,883,297...25,909,608
Ensembl chr 7:25,883,251...25,906,892
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TP53
tumor protein p53
disease_progression
ISO
RGD
PMID:17969407
RGD:2298526
NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
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