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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:cerebrum cancer
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Accession:DOID:368 term browser browse the term
Definition:A supratentorial cancer that is located_in the cerebrum. (DO)
Synonyms:exact_synonym: cerebral cancer;   neoplasm of cerebrum;   tumor of Cerebrum
 primary_id: RDO:9002783
 xref: ICD9CM:191.8;   NCI:C4874
For additional species annotation, visit the Alliance of Genome Resources.


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Adult Cerebral Astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP1 matrix metallopeptidase 1 susceptibility IAGP DNA:insertion:promoter:g.-1607insG (human) RGD PMID:17502998 RGD:7207034 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160
JBrowse link
adult pineal parenchymal tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MKI67 marker of proliferation Ki-67 severity IEP RGD PMID:21696422 RGD:6483520 NCBI chr10:128,096,659...128,126,423
Ensembl chr10:128,096,659...128,126,423
JBrowse link
adult spinal cord ependymoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD6 chromodomain helicase DNA binding protein 6 IAGP ClinVar Annotator: match by term: Adult Spinal Cord Ependymoma ClinVar NCBI chr20:41,402,083...41,618,377
Ensembl chr20:41,402,083...41,618,384
JBrowse link
anaplastic astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler IAGP ClinVar Annotator: match by term: Astrocytoma, anaplastic ClinVar PMID:7697714 PMID:8968741 PMID:18414213 PMID:22995991 PMID:24082139 More... NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IEP mRNA:decreased expression:brain RGD PMID:19179066 RGD:13702872 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G TP53 tumor protein p53 IAGP ClinVar Annotator: match by term: Astrocytoma, anaplastic ClinVar PMID:1349175 PMID:1565143 PMID:1565144 PMID:1591732 PMID:7565304 More... NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
anaplastic ependymoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PALB2 partner and localizer of BRCA2 IAGP ClinVar Annotator: match by term: Anaplastic ependymoma ClinVar PMID:21285249 PMID:25741868 PMID:26315354 PMID:26467025 PMID:26580448 More... NCBI chr16:23,603,162...23,641,337
Ensembl chr16:23,603,160...23,641,310
JBrowse link
G RNF213 ring finger protein 213 IAGP ClinVar Annotator: match by term: Anaplastic ependymoma ClinVar PMID:26822237 NCBI chr17:80,260,820...80,398,794
Ensembl chr17:80,260,866...80,398,786
JBrowse link
G RNF213-AS1 RNF213 antisense RNA 1 IAGP ClinVar Annotator: match by term: Anaplastic ependymoma ClinVar PMID:26822237 NCBI chr17:80,351,830...80,415,168
Ensembl chr17:80,351,828...80,415,168
JBrowse link
G RUNX1 RUNX family transcription factor 1 IAGP ClinVar Annotator: match by term: Anaplastic ependymoma ClinVar PMID:25741868 PMID:28492532 NCBI chr21:34,787,801...35,049,334
Ensembl chr21:34,787,801...36,004,667
JBrowse link
astroblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR542 microRNA 542 disease_progression IEP RGD PMID:26286747 RGD:13782052 NCBI chr  X:134,541,341...134,541,437
Ensembl chr  X:134,541,341...134,541,437
JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 severity IMP
IEP
RGD PMID:26956052 PMID:26286747 RGD:11343921, RGD:13782052 NCBI chr 5:68,215,737...68,301,821
Ensembl chr 5:68,215,756...68,301,821
JBrowse link
brain glioblastoma multiforme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR139 microRNA 139 IEP RNA:decreased expression:brain: RGD PMID:26449464 RGD:13838722 NCBI chr11:72,615,063...72,615,130
Ensembl chr11:72,615,063...72,615,130
JBrowse link
G NCAM1 neural cell adhesion molecule 1 disease_progression IEP RGD PMID:20219118 RGD:40924672 NCBI chr11:112,961,420...113,278,436
Ensembl chr11:112,961,247...113,278,436
JBrowse link
cerebellar medulloblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSH6 mutS homolog 6 IAGP ClinVar Annotator: match by term: Cerebellar medulloblastoma ClinVar NCBI chr 2:47,783,145...47,806,954
Ensembl chr 2:47,695,530...47,810,063
JBrowse link
childhood pilocytic astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAPK1 mitogen-activated protein kinase 1 IEP protein:increased expression:brain: RGD PMID:21466243 RGD:13702864 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680
JBrowse link
choroid plexus carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXO3 forkhead box O3 IAGP ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr 6:108,559,825...108,684,774
Ensembl chr 6:108,559,835...108,684,774
JBrowse link
G NF2 neurofibromin 2 IAGP ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr22:29,603,556...29,698,600
Ensembl chr22:29,603,556...29,698,598
JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 IAGP ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr 5:177,131,835...177,300,213
Ensembl chr 5:177,133,025...177,300,213
JBrowse link
G TP53 tumor protein p53 IAGP ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:1631137 PMID:1978757 PMID:8099841 PMID:8425176 PMID:8527048 More... NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
chromosome 13q14 deletion syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638
JBrowse link
G AL139082.1 novel transcript, antisense to NEK3 & NEK5 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,128,895...52,132,723
Ensembl chr13:52,128,891...52,132,723
JBrowse link
G AL355390.1 novel transcript IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,412,957...74,419,115
Ensembl chr13:74,412,957...74,419,115
JBrowse link
G AL445209.1 novel transcript, antisense to POU4F1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,596,122...78,599,619
Ensembl chr13:78,596,129...78,599,619
JBrowse link
G AL445238.1 keratin-associated protein 21-1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,832,361...63,833,053
Ensembl chr13:63,832,361...63,833,531
JBrowse link
G AL445989.1 keratin-associated protein 21-1-like IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,746,102...63,747,788
Ensembl chr13:63,746,741...63,751,080
JBrowse link
G AL450447.1 putative UPF0607 protein ENSP00000383144 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,661,374...77,662,803
Ensembl chr13:77,661,376...77,662,626
JBrowse link
G ALG11 ALG11 alpha-1,2-mannosyltransferase IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,012,398...52,033,600
Ensembl chr13:52,012,391...52,079,232
JBrowse link
G ARL11 ADP ribosylation factor like GTPase 11 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,628,456...49,633,872
Ensembl chr13:49,628,507...49,633,872
JBrowse link
G ATP7B ATPase copper transporting beta IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,932,669...52,012,130
Ensembl chr13:51,930,436...52,012,125
JBrowse link
G ATXN8OS ATXN8 opposite strand lncRNA IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,107,213...70,139,753
Ensembl chr13:70,107,213...70,171,738
JBrowse link
G BORA BORA aurora kinase A activator IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,727,923...72,756,196
Ensembl chr13:72,727,749...72,756,198
JBrowse link
G C13orf42 chromosome 13 open reading frame 42 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,082,119...51,172,388
Ensembl chr13:51,082,119...51,200,252
JBrowse link
G CAB39L calcium binding protein 39 like IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,308,650...49,444,851
Ensembl chr13:49,308,650...49,444,064
JBrowse link
G CCDC70 coiled-coil domain containing 70 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,861,969...51,866,232
Ensembl chr13:51,861,969...51,866,232
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,247,875...49,293,486
Ensembl chr13:49,247,925...49,293,485
JBrowse link
G CKAP2 cytoskeleton associated protein 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,455,429...52,476,627
Ensembl chr13:52,455,429...52,476,628
JBrowse link
G CLN5 CLN5 intracellular trafficking protein IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:76,992,081...77,005,117
Ensembl chr13:76,990,660...77,019,143
JBrowse link
G CNMD chondromodulin IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,703,264...52,739,820
Ensembl chr13:52,703,264...52,739,820
JBrowse link
G COMMD6 COMM domain containing 6 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,525,214...75,549,439
Ensembl chr13:75,525,214...75,549,439
JBrowse link
G CYSLTR2 cysteinyl leukotriene receptor 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,653,929...48,711,226
Ensembl chr13:48,653,711...48,711,226
JBrowse link
G DACH1 dachshund family transcription factor 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,437,966...71,868,068
Ensembl chr13:71,437,966...71,867,204
JBrowse link
G DHRS12 dehydrogenase/reductase 12 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,767,993...51,804,163
Ensembl chr13:51,767,993...51,804,163
JBrowse link
G DIAPH3 diaphanous related formin 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:59,665,583...60,163,928
Ensembl chr13:59,665,583...60,163,928
JBrowse link
G DIAPH3-AS1 DIAPH3 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,012,718...60,044,357
Ensembl chr13:60,012,734...60,044,357
JBrowse link
G DIAPH3-AS2 DIAPH3 antisense RNA 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,144,698...60,153,505
Ensembl chr13:60,144,648...60,153,678
JBrowse link
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,752,169...72,781,900
Ensembl chr13:72,752,169...72,782,096
JBrowse link
G DLEU1 deleted in lymphocytic leukemia 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,082,169...50,528,643
Ensembl chr13:50,082,169...50,906,856
JBrowse link
G DLEU1-AS1 DLEU1 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,520,933...50,527,449
Ensembl chr13:50,519,364...50,843,939
JBrowse link
G DLEU2 deleted in lymphocytic leukemia 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,982,549...50,125,541
Ensembl chr13:49,956,670...50,125,720
JBrowse link
G DLEU7 deleted in lymphocytic leukemia 7 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,711,026...50,843,945
Ensembl chr13:50,519,364...50,843,939
JBrowse link
G DLEU7-AS1 DLEU7 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,807,855...50,849,905
Ensembl chr13:50,082,169...50,906,856
JBrowse link
G EBPL EBP like IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,660,674...49,691,487
Ensembl chr13:49,660,674...49,691,486
JBrowse link
G EDNRB endothelin receptor type B IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529
JBrowse link
G EDNRB-AS1 EDNRB antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,818,937...77,908,442
Ensembl chr13:77,779,723...77,844,145
JBrowse link
G FAM124A family with sequence similarity 124 member A IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,222,367...51,284,241
Ensembl chr13:51,222,334...51,284,239
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:76,992,597...77,027,164
Ensembl chr13:76,992,598...77,027,195
JBrowse link
G FNDC3A fibronectin type III domain containing 3A IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,975,241...49,209,779
Ensembl chr13:48,975,912...49,209,779
JBrowse link
G HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1 like 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,617,525...52,643,773
Ensembl chr13:52,642,431...52,643,773
JBrowse link
G INTS6 integrator complex subunit 6 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,353,171...51,453,333
Ensembl chr13:51,354,077...51,454,264
JBrowse link
G INTS6-AS1 INTS6 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,453,345...51,454,716
Ensembl chr13:51,452,364...51,554,678
JBrowse link
G ITM2B integral membrane protein 2B IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,233,206...48,270,357
Ensembl chr13:48,232,612...48,270,357
JBrowse link
G KCNRG potassium channel regulator IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,015,444...50,020,922
Ensembl chr13:50,015,254...50,020,922
JBrowse link
G KCTD12 potassium channel tetramerization domain containing 12 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:76,880,175...76,886,405
Ensembl chr13:76,880,175...76,886,405
JBrowse link
G KLF12 Kruppel like factor 12 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,686,089...74,168,295
Ensembl chr13:73,686,089...74,133,929
JBrowse link
G KLF5 Kruppel like factor 5 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,054,976...73,077,538
Ensembl chr13:73,054,976...73,077,541
JBrowse link
G KLHL1 kelch like family member 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:69,700,593...70,108,452
Ensembl chr13:69,700,594...70,108,493
JBrowse link
G KPNA3 karyopherin subunit alpha 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,699,307...49,792,682
Ensembl chr13:49,699,320...49,792,682
JBrowse link
G LINC00331 long intergenic non-protein coding RNA 331 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,787,319...78,840,050
Ensembl chr13:78,786,272...78,840,051
JBrowse link
G LINC00333 long intergenic non-protein coding RNA 333 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:84,140,602...84,606,768
Ensembl chr13:84,562,364...84,563,236
JBrowse link
G LINC00345 long intergenic non-protein coding RNA 345 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,483,687...52,601,006
Ensembl chr13:52,482,804...52,489,216
JBrowse link
G LINC00347 long intergenic non-protein coding RNA 347 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,552,843...74,557,120
Ensembl chr13:74,552,503...74,565,445
JBrowse link
G LINC00348 long intergenic non-protein coding RNA 348 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,015,141...71,168,417
Ensembl chr13:71,015,042...71,168,417
JBrowse link
G LINC00351 long intergenic non-protein coding RNA 351 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:85,363,603...85,544,662
Ensembl chr13:85,363,601...85,544,570
JBrowse link
G LINC00355 long intergenic non-protein coding RNA 355 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,986,371...64,076,011
Ensembl chr13:63,851,197...64,076,044
JBrowse link
G LINC00358 long intergenic non-protein coding RNA 358 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,003,525...62,029,548
Ensembl chr13:61,997,136...62,029,572
JBrowse link
G LINC00364 long intergenic non-protein coding RNA 364 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:67,372,387...67,379,994
Ensembl chr13:67,326,177...67,379,994
JBrowse link
G LINC00374 long intergenic non-protein coding RNA 374 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:58,211,697...58,233,117
Ensembl chr13:58,211,697...58,233,117
JBrowse link
G LINC00375 long intergenic non-protein coding RNA 375 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:85,065,087...85,148,057
Ensembl chr13:85,065,087...85,078,920
JBrowse link
G LINC00376 long intergenic non-protein coding RNA 376 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,183,101...63,328,094
Ensembl chr13:63,183,096...63,328,129
JBrowse link
G LINC00377 long intergenic non-protein coding RNA 377 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:81,018,391...81,044,442
Ensembl chr13:81,018,176...81,044,691
JBrowse link
G LINC00378 long intergenic non-protein coding RNA 378 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,672,955...60,695,806
Ensembl chr13:60,618,991...61,176,758
JBrowse link
G LINC00381 long intergenic non-protein coding RNA 381 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,419,173...74,435,159
Ensembl chr13:74,419,158...74,444,735
JBrowse link
G LINC00382 long intergenic non-protein coding RNA 382 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,872,586...79,918,036
Ensembl chr13:79,872,586...79,918,042
JBrowse link
G LINC00383 long intergenic non-protein coding RNA 383 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:69,222,346...69,322,101
Ensembl chr13:69,221,866...69,322,190
JBrowse link
G LINC00392 long intergenic non-protein coding RNA 392 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,564,244...73,587,879
Ensembl chr13:73,564,244...73,588,070
JBrowse link
G LINC00393 long intergenic non-protein coding RNA 393 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,546,687...73,670,457
Ensembl chr13:73,413,473...73,661,891
JBrowse link
G LINC00395 long intergenic non-protein coding RNA 395 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,667,682...63,738,018
Ensembl chr13:63,667,681...63,738,018
JBrowse link
G LINC00402 long intergenic non-protein coding RNA 402 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,231,444...74,259,976
Ensembl chr13:74,231,457...74,259,976
JBrowse link
G LINC00430 long intergenic non-protein coding RNA 430 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:86,909,601...86,936,807
Ensembl chr13:86,909,586...86,937,108
JBrowse link
G LINC00434 long intergenic non-protein coding RNA 434 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,214,347...60,268,104
Ensembl chr13:60,214,352...60,214,946
JBrowse link
G LINC00444 long intergenic non-protein coding RNA 444 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:47,903,806...47,935,824 JBrowse link
G LINC00446 long intergenic non-protein coding RNA 446 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,012,883...78,053,595
Ensembl chr13:77,997,909...78,053,604
JBrowse link
G LINC00448 long intergenic non-protein coding RNA 448 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,672,285...62,807,359
Ensembl chr13:62,672,285...62,796,714
JBrowse link
G LINC00458 long intergenic non-protein coding RNA 458 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:54,124,324...54,132,871
Ensembl chr13:54,115,783...54,142,319
JBrowse link
G LINC00459 long intergenic non-protein coding RNA 459 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,323,657...62,328,847
Ensembl chr13:62,323,657...62,328,833
JBrowse link
G LINC00462 long intergenic non-protein coding RNA 462 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,576,974...48,580,901
Ensembl chr13:48,576,974...48,578,088
JBrowse link
G LINC00550 long intergenic non-protein coding RNA 550 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:68,861,284...68,885,325
Ensembl chr13:68,861,284...68,885,325
JBrowse link
G LINC00558 long intergenic non-protein coding RNA 558 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:53,815,419...53,876,119
Ensembl chr13:53,815,419...53,939,960
JBrowse link
G LINC00561 long intergenic non-protein coding RNA 561 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,932,398...75,935,132
Ensembl chr13:75,932,395...75,935,132
JBrowse link
G LINC00562 long intergenic non-protein coding RNA 562 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:47,930,153...47,932,622
Ensembl chr13:47,930,153...47,932,622
JBrowse link
G LINC00564 long intergenic non-protein coding RNA 564 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:81,225,865...81,226,983
Ensembl chr13:81,225,865...81,226,983
JBrowse link
G LINC01038 long intergenic non-protein coding RNA 1038 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,804,386...79,805,682
Ensembl chr13:79,804,418...79,805,685
JBrowse link
G LINC01052 long intergenic non-protein coding RNA 1052 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:65,866,047...65,878,219
Ensembl chr13:65,866,070...65,922,731
JBrowse link
G LINC01065 long intergenic non-protein coding RNA 1065 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:53,131,746...53,151,900
Ensembl chr13:53,099,397...53,151,914
JBrowse link
G LINC01068 long intergenic non-protein coding RNA 1068 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,566,727...79,571,446
Ensembl chr13:79,566,678...79,571,445
JBrowse link
G LINC01069 long intergenic non-protein coding RNA 1069 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,979,766...77,994,773
Ensembl chr13:77,979,817...77,997,881
JBrowse link
G LINC01074 long intergenic non-protein coding RNA 1074 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,321,305...62,322,398
Ensembl chr13:62,321,305...62,322,398
JBrowse link
G LINC01075 long intergenic non-protein coding RNA 1075 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,212,282...62,249,951
Ensembl chr13:62,212,577...62,249,947
JBrowse link
G LINC01077 long intergenic non-protein coding RNA 1077 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,567,598...48,590,598
Ensembl chr13:48,570,639...48,573,317
JBrowse link
G LINC01078 long intergenic non-protein coding RNA 1078 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,240,588...75,252,012
Ensembl chr13:75,250,480...75,252,012
JBrowse link
G LINC01080 long intergenic non-protein coding RNA 1080 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:80,011,077...80,026,663
Ensembl chr13:80,011,077...80,028,283
JBrowse link
G LINC01442 long intergenic non-protein coding RNA 1442 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,789,787...60,941,768
Ensembl chr13:60,916,981...60,945,955
JBrowse link
G LINC02333 long intergenic non-protein coding RNA 2333 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,334,295...52,341,883
Ensembl chr13:52,334,295...52,341,896
JBrowse link
G LINC02338 long intergenic non-protein coding RNA 2338 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:58,165,827...58,209,483
Ensembl chr13:58,165,827...58,209,483
JBrowse link
G LINC02339 long intergenic non-protein coding RNA 2339 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:61,424,689...61,427,946
Ensembl chr13:61,424,689...61,427,946
JBrowse link
G LMO7 LIM domain 7 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,620,434...75,859,870
Ensembl chr13:75,620,434...75,859,870
JBrowse link
G LMO7-AS1 LMO7 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,604,700...75,635,994
Ensembl chr13:75,604,700...75,635,994
JBrowse link
G LMO7DN LMO7 downstream neighbor IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,871,038...75,883,813
Ensembl chr13:75,871,038...75,883,811
JBrowse link
G LMO7DN-IT1 LMO7DN intronic transcript 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,876,886...75,881,127
Ensembl chr13:75,876,886...75,881,127
JBrowse link
G LOC105370203 uncharacterized LOC105370203 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,235,513...49,247,840 JBrowse link
G LOC105370268 lncRNA-ACOD1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar
G LOC107457599 meiotic recombination hotspot P IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,690,561...60,694,062 JBrowse link
G LOC107882127 EDNRB upstream promoter region IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,975,613...77,976,074 JBrowse link
G LOC107882129 EDNRB proximal promoter region IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,918,760...77,919,832 JBrowse link
G LOC109461478 ATXN8 opposite strand (non-protein coding) repeat instability region IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,139,352...70,139,429 JBrowse link
G LOC110120827 VISTA enhancer hs126 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,769,477...70,770,736 JBrowse link
G LOC110120828 VISTA enhancer hs129 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,200,716...71,201,236 JBrowse link
G LOC110120829 VISTA enhancer hs131 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,197,133...72,199,738 JBrowse link
G LOC110120830 VISTA enhancer hs135 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,574,916...72,575,890 JBrowse link
G LOC110120831 VISTA enhancer hs137 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,726,717...71,728,802 JBrowse link
G LOC110120832 VISTA enhancer hs138 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,851,655...71,854,203 JBrowse link
G LOC110120833 VISTA enhancer hs141 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,426,945...72,428,915 JBrowse link
G LOC110120834 VISTA enhancer hs142 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,507,309...72,509,616 JBrowse link
G LOC110120843 VISTA enhancer hs188 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,771,848...71,774,098 JBrowse link
G LOC110120891 VISTA enhancer hs540 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,783,961...70,785,375 JBrowse link
G LOC110120897 VISTA enhancer hs575 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:67,854,985...67,856,394 JBrowse link
G LOC110120909 VISTA enhancer hs619 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,759,384...71,760,856 JBrowse link
G LOC110120945 VISTA enhancer hs881 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,035,667...66,036,616 JBrowse link
G LOC110120946 VISTA enhancer hs882 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,958,905...70,960,063 JBrowse link
G LOC110120950 VISTA enhancer hs915 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,401,880...78,403,203 JBrowse link
G LOC110121360 VISTA enhancer hs1394 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,831,993...77,833,579 JBrowse link
G LOC110121375 VISTA enhancer hs1471 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,658,111...79,660,495 JBrowse link
G LOC111365190 HNF1 motif-containing MPRA enhancer 52 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,227,924...74,228,068 JBrowse link
G LOC112163662 Sharpr-MPRA regulatory region 3717 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,066,653...48,066,947 JBrowse link
G LOC112163663 Sharpr-MPRA regulatory region 2352 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,104,673...52,104,967 JBrowse link
G LOC112163664 Sharpr-MPRA regulatory region 8029 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,850,374...52,850,668 JBrowse link
G LOC112163665 Sharpr-MPRA regulatory region 4317 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,584,335...60,584,629 JBrowse link
G LOC112163666 Sharpr-MPRA regulatory region 1301 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,625,916...63,626,210 JBrowse link
G LOC112163667 Sharpr-MPRA regulatory region 14942 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:68,057,157...68,057,451 JBrowse link
G LOC112163668 Sharpr-MPRA regulatory region 2769 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,090,471...73,090,765 JBrowse link
G LOC112163669 Sharpr-MPRA regulatory region 11269 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,187,632...74,187,926 JBrowse link
G LOC112163670 Sharpr-MPRA regulatory region 2285 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,287,712...74,288,006 JBrowse link
G LOC112163671 Sharpr-MPRA regulatory region 1150 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,409,474...77,409,768 JBrowse link
G LOC112163672 Sharpr-MPRA regulatory region 2923 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:84,399,374...84,399,668 JBrowse link
G LOC113939939 Sharpr-MPRA regulatory region 13963 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,301,133...49,301,427 JBrowse link
G LPAR6 lysophosphatidic acid receptor 6 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,400,897...48,444,669
Ensembl chr13:48,389,567...48,444,704
JBrowse link
G MED4 mediator complex subunit 4 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,075,724...48,095,104
Ensembl chr13:48,053,323...48,095,131
JBrowse link
G MED4-AS1 MED4 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,077,137...48,079,993
Ensembl chr13:48,077,137...48,079,991
JBrowse link
G MIR1297 microRNA 1297 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:54,311,972...54,312,048
Ensembl chr13:54,311,972...54,312,048
JBrowse link
G MIR15A microRNA 15a IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,049,119...50,049,201
Ensembl chr13:50,049,119...50,049,201
JBrowse link
G MIR16-1 microRNA 16-1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,048,973...50,049,061
Ensembl chr13:50,048,973...50,049,061
JBrowse link
G MIR3169 microRNA 3169 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:61,199,798...61,199,880
Ensembl chr13:61,199,798...61,199,880
JBrowse link
G MIR3613 microRNA 3613 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,996,415...49,996,501
Ensembl chr13:49,996,415...49,996,501
JBrowse link
G MIR3665 microRNA 3665 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,698,012...77,698,116
Ensembl chr13:77,698,012...77,698,116
JBrowse link
G MIR4703 microRNA 4703 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,552,589...51,552,667
Ensembl chr13:51,552,589...51,552,667
JBrowse link
G MIR4704 microRNA 4704 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,218,250...66,218,324
Ensembl chr13:66,218,250...66,218,324
JBrowse link
G MIR5007 microRNA 5007 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:55,174,454...55,174,548
Ensembl chr13:55,174,454...55,174,548
JBrowse link
G MIR548X2 microRNA 548x-2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:65,966,330...65,966,429
Ensembl chr13:65,966,330...65,966,429
JBrowse link
G MIR5693 microRNA 5693 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,348,567...51,348,639
Ensembl chr13:51,348,567...51,348,639
JBrowse link
G MIR759 microRNA 759 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,810,050...52,810,140
Ensembl chr13:52,810,050...52,810,140
JBrowse link
G MLNR motilin receptor IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,220,338...49,222,377
Ensembl chr13:49,220,338...49,222,377
JBrowse link
G MYCBP2 MYC binding protein 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,044,657...77,327,098
Ensembl chr13:77,042,474...77,327,094
JBrowse link
G MYCBP2-AS1 MYCBP2 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,075,514...77,087,776
Ensembl chr13:77,026,767...77,129,717
JBrowse link
G MYCBP2-AS2 MYCBP2 antisense RNA 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,080,511...77,081,190
Ensembl chr13:77,080,511...77,081,190
JBrowse link
G MZT1 mitotic spindle organizing protein 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,708,367...72,727,629
Ensembl chr13:72,708,367...72,727,629
JBrowse link
G NDFIP2 Nedd4 family interacting protein 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,481,155...79,556,077
Ensembl chr13:79,481,124...79,556,075
JBrowse link
G NDFIP2-AS1 NDFIP2 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,477,364...79,481,231
Ensembl chr13:79,477,364...79,481,231
JBrowse link
G NEK3 NIMA related kinase 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,132,647...52,159,597
Ensembl chr13:52,132,639...52,159,861
JBrowse link
G NEK5 NIMA related kinase 5 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,033,611...52,129,073
Ensembl chr13:52,033,611...52,129,092
JBrowse link
G NUDT15 nudix hydrolase 15 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,037,726...48,052,755
Ensembl chr13:48,037,726...48,047,221
JBrowse link
G OBI1 ORC ubiquitin ligase 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,614,286...78,659,165
Ensembl chr13:78,614,289...78,659,155
JBrowse link
G OBI1-AS1 OBI1 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,054,855...78,617,325
Ensembl chr13:77,919,689...78,617,328
JBrowse link
G OLFM4 olfactomedin 4 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:53,028,813...53,052,057
Ensembl chr13:53,028,813...53,052,057
JBrowse link
G OR7E104P olfactory receptor family 7 subfamily E member 104 pseudogene IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,828,840...63,844,125
Ensembl chr13:63,828,840...63,844,125
JBrowse link
G PCDH17 protocadherin 17 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,630,104...57,729,311
Ensembl chr13:57,631,744...57,729,311
JBrowse link
G PCDH20 protocadherin 20 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:61,409,685...61,415,522
Ensembl chr13:61,409,685...61,415,522
JBrowse link
G PCDH8 protocadherin 8 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,842,889...52,848,640
Ensembl chr13:52,842,889...52,848,641
JBrowse link
G PCDH9 protocadherin 9 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,302,834...67,230,336
Ensembl chr13:66,302,834...67,230,445
JBrowse link
G PCDH9-AS2 PCDH9 antisense RNA 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,825,169...66,915,031
Ensembl chr13:66,825,169...66,915,031
JBrowse link
G PCDH9-AS3 PCDH9 antisense RNA 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,977,389...66,985,776
Ensembl chr13:66,977,432...66,985,776
JBrowse link
G PCDH9-AS4 PCDH9 antisense RNA 4 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,990,886...67,002,000
Ensembl chr13:66,990,886...67,002,007
JBrowse link
G PHF11 PHD finger protein 11 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,495,953...49,528,992
Ensembl chr13:49,495,610...49,528,981
JBrowse link
G PIBF1 progesterone immunomodulatory binding factor 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,782,133...73,016,461
Ensembl chr13:72,782,133...73,016,461
JBrowse link
G POU4F1 POU class 4 homeobox 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,598,362...78,603,552
Ensembl chr13:78,598,362...78,603,552
JBrowse link
G PRR20A proline rich 20A IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,140,918...57,143,939
Ensembl chr13:57,140,918...57,143,939
JBrowse link
G PRR20B proline rich 20B IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,147,488...57,150,509
Ensembl chr13:57,147,488...57,150,509
JBrowse link
G PRR20C proline rich 20C IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,154,061...57,157,082
Ensembl chr13:57,140,918...57,157,082
JBrowse link
G PRR20D proline rich 20D IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,160,632...57,163,653
Ensembl chr13:57,160,632...57,163,653
JBrowse link
G PRR20E proline rich 20E IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,167,197...57,170,218
Ensembl chr13:57,167,197...57,170,218
JBrowse link
G RB1 RB transcriptional corepressor 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436
JBrowse link
G RB1-DT RB1 divergent transcript IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,296,513...48,303,702
Ensembl chr13:48,296,162...48,303,661
JBrowse link
G RBM26 RNA binding motif protein 26 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,311,827...79,406,255
Ensembl chr13:79,311,824...79,406,477
JBrowse link
G RBM26-AS1 RBM26 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,406,309...79,424,336
Ensembl chr13:79,406,293...79,427,317
JBrowse link
G RCBTB1 RCC1 and BTB domain containing protein 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,531,944...49,585,587
Ensembl chr13:49,531,946...49,585,558
JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,488,963...48,535,997
Ensembl chr13:48,488,963...48,533,256
JBrowse link
G RNASEH2B ribonuclease H2 subunit B IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,909,678...50,970,462
Ensembl chr13:50,909,747...51,024,120
JBrowse link
G RNASEH2B-AS1 RNASEH2B antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,882,378...50,910,712
Ensembl chr13:50,862,172...50,910,764
JBrowse link
G SCEL sciellin IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,535,694...77,645,263
Ensembl chr13:77,535,674...77,645,263
JBrowse link
G SCEL-AS1 SCEL antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,599,755...77,606,551
Ensembl chr13:77,599,755...77,606,551
JBrowse link
G SERPINE3 serpin family E member 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,335,804...51,365,454
Ensembl chr13:51,335,773...51,364,735
JBrowse link
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,444,274...49,495,003
Ensembl chr13:49,444,374...49,495,003
JBrowse link
G SETDB2-PHF11 SETDB2-PHF11 readthrough IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,444,274...49,528,976 JBrowse link
G SLAIN1 SLAIN motif family member 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,697,674...77,764,231
Ensembl chr13:77,697,687...77,764,242
JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:83,877,205...83,882,474
Ensembl chr13:83,877,205...83,882,474
JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:85,792,790...85,799,419
Ensembl chr13:85,792,790...85,806,683
JBrowse link
G SNORA107 small nucleolar RNA, H/ACA box 107 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:84,783,654...84,783,778 JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G SPRYD7 SPRY domain containing 7 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,912,702...49,936,501
Ensembl chr13:49,912,702...49,936,490
JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:47,942,656...48,001,273
Ensembl chr13:47,745,736...48,037,968
JBrowse link
G SUCLA2-AS1 SUCLA2 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,001,389...48,002,614
Ensembl chr13:48,001,389...48,002,552
JBrowse link
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,652,703...52,700,909
Ensembl chr13:52,652,709...52,700,909
JBrowse link
G SUGT1-DT SUGT1 divergent transcript IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,651,305...52,652,307
Ensembl chr13:52,651,305...52,652,279
JBrowse link
G TBC1D4 TBC1 domain family member 4 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,283,503...75,483,144
Ensembl chr13:75,283,503...75,482,169
JBrowse link
G TDRD3 tudor domain containing 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,396,457...60,573,879
Ensembl chr13:60,396,457...60,573,878
JBrowse link
G THSD1 thrombospondin type 1 domain containing 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,377,167...52,406,172
Ensembl chr13:52,377,167...52,416,373
JBrowse link
G TMEM272 transmembrane protein 272 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,813,347...51,845,177
Ensembl chr13:51,813,347...51,845,177
JBrowse link
G TRIM13 tripartite motif containing 13 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,997,042...50,018,467
Ensembl chr13:49,995,888...50,020,481
JBrowse link
G UCHL3 ubiquitin C-terminal hydrolase L3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,549,490...75,606,020
Ensembl chr13:75,549,480...75,606,020
JBrowse link
G UTP14C UTP14C small subunit processome component IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,024,691...52,033,600
Ensembl chr13:52,024,691...52,033,600
JBrowse link
G VPS36 vacuolar protein sorting 36 homolog IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,412,606...52,450,634
Ensembl chr13:52,412,602...52,450,634
JBrowse link
G WDFY2 WD repeat and FYVE domain containing 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,584,194...51,767,709
Ensembl chr13:51,584,455...51,767,709
JBrowse link
corpus callosum lipoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCSK7 proprotein convertase subtilisin/kexin type 7 IAGP ClinVar Annotator: match by term: Lipoma of corpus callosum ClinVar PMID:25741868 NCBI chr11:117,201,156...117,232,525
Ensembl chr11:117,204,337...117,232,525
JBrowse link
familial retinoblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RB1 RB transcriptional corepressor 1 IAGP DNA:mutations:promoter, intron, exon:multiple RGD PMID:17096365 RGD:8547984 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436
JBrowse link
fibrillary astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KRAS KRAS proto-oncogene, GTPase IEP mRNA:decreased expression:brain RGD PMID:19179066 RGD:13702872 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
glioblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR3 actin related protein 3 IEP mRNA:increased expression:brain (human) RGD PMID:25682201 RGD:11570557 NCBI chr 2:113,889,934...113,962,596
Ensembl chr 2:113,890,063...113,962,596
JBrowse link
G ADGRB1 adhesion G protein-coupled receptor B1 treatment IDA
IEP
mRNA:decreased expression:brain: RGD PMID:16244591 PMID:12507886 RGD:13831352, RGD:13831355 NCBI chr 8:142,449,649...142,545,009
Ensembl chr 8:142,449,430...142,545,009
JBrowse link
G ADGRL4 adhesion G protein-coupled receptor L4 treatment
severity
ISO
IEP
RGD PMID:27416955 PMID:23096411 PMID:23096411 RGD:13838664, RGD:13838665, RGD:13838665 NCBI chr 1:78,889,764...79,006,730
Ensembl chr 1:78,889,764...79,282,124
JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:10802656 RGD:734543 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751
JBrowse link
G AKT3 AKT serine/threonine kinase 3 disease_progression IDA RGD PMID:27422127 RGD:13674164 NCBI chr 1:243,488,233...243,851,079
Ensembl chr 1:243,488,233...243,851,079
JBrowse link
G APC APC regulator of WNT signaling pathway EXP CTD Direct Evidence: marker/mechanism CTD PMID:7661930 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,498...112,846,239
JBrowse link
G ASPM assembly factor for spindle microtubules IEP mRNA:increased expression:brain: RGD PMID:18636190 RGD:13439742 NCBI chr 1:197,084,127...197,146,669
Ensembl chr 1:197,084,121...197,146,694
JBrowse link
G ATM ATM serine/threonine kinase IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:9054948 PMID:19781682 PMID:23322442 PMID:25525159 PMID:25741868 More... NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,223,044...108,369,102
JBrowse link
G ATRX ATRX chromatin remodeler disease_progression IEP
IAGP
ClinVar Annotator: match by term: Glioblastoma multiforme, somatic ClinVar PMID:27478330 RGD:13442489 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G BAG3 BAG cochaperone 3 treatment ISO RGD PMID:21561597 RGD:5687132 NCBI chr10:119,651,380...119,677,819
Ensembl chr10:119,651,380...119,677,819
JBrowse link
G BCHE butyrylcholinesterase EXP CTD Direct Evidence: marker/mechanism CTD PMID:2317787 NCBI chr 3:165,772,904...165,837,423
Ensembl chr 3:165,772,904...165,837,462
JBrowse link
G BECN1 beclin 1 disease_progression IEP RGD PMID:20863706 RGD:6483102 NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23582323 NCBI chr 3:4,979,420...4,985,323
Ensembl chr 3:4,979,437...4,985,323
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger EXP CTD Direct Evidence: marker/mechanism CTD PMID:19823589 NCBI chr10:22,321,099...22,331,484
Ensembl chr10:22,321,099...22,331,484
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:12068308 PMID:12198537 PMID:12447372 PMID:12460918 PMID:12460919 More... NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929
JBrowse link
G BRD2 bromodomain containing 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:27388964 NCBI chr 6:32,968,594...32,981,505
Ensembl chr 6:32,968,594...32,981,505
JBrowse link
G BRD4 bromodomain containing 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26455392 PMID:27388964 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545
JBrowse link
G BRD7 bromodomain containing 7 IEP protein:increased expression:brain: RGD PMID:24404152 RGD:9586441 NCBI chr16:50,315,957...50,368,988
Ensembl chr16:50,313,487...50,368,988
JBrowse link
G C11orf65 chromosome 11 open reading frame 65 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:9054948 PMID:19781682 PMID:23322442 PMID:25525159 PMID:25741868 More... NCBI chr11:108,308,519...108,469,832
Ensembl chr11:108,308,519...108,467,531
JBrowse link
G CBX6 chromobox 6 disease_progression IEP mRNA,protein:decreased expression:astrocyte: RGD PMID:24260522 RGD:9587354 NCBI chr22:38,861,422...38,872,216
Ensembl chr22:38,861,422...38,872,249
JBrowse link
G CBX7 chromobox 7 disease_progression IEP mRNA,protein:decreased expression:astrocyte: RGD PMID:24260522 RGD:9587354 NCBI chr22:39,130,772...39,152,680
Ensembl chr22:39,120,167...39,152,680
JBrowse link
G CBX8 chromobox 8 IEP mRNA:increased expression:astrocyte: RGD PMID:24260522 RGD:9587354 NCBI chr17:79,792,132...79,797,077
Ensembl chr17:79,792,132...79,801,683
JBrowse link
G CCNH cyclin H EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 5:87,311,471...87,412,971
Ensembl chr 5:87,318,416...87,412,930
JBrowse link
G CD9 CD9 molecule EXP CTD Direct Evidence: marker/mechanism CTD PMID:26573230 NCBI chr12:6,199,946...6,238,266
Ensembl chr12:6,199,715...6,238,271
JBrowse link
G CDK4 cyclin dependent kinase 4 IAGP DNA:amplication RGD PMID:23796897 RGD:13702089 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CDK6 cyclin dependent kinase 6 severity EXP
IEP
CTD Direct Evidence: marker/mechanism CTD PMID:20534551 PMID:10884881 RGD:13702095 NCBI chr 7:92,604,921...92,836,573
Ensembl chr 7:92,604,921...92,836,573
JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A treatment IMP RGD PMID:10720483 RGD:8552659 NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301
JBrowse link
G CHAF1B chromatin assembly factor 1 subunit B IEP protein:increased expression:brain: RGD PMID:24039914 RGD:9587472 NCBI chr21:36,380,145...36,419,015
Ensembl chr21:36,385,392...36,419,015
JBrowse link
G CHI3L1 chitinase 3 like 1 IEP
EXP
mRNA:increased expression:brain, tumor (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:21029458 PMID:11161003 RGD:4892621 NCBI chr 1:203,178,931...203,186,704
Ensembl chr 1:203,178,931...203,186,704
JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 disease_progression ISO RGD PMID:23360795 RGD:9685152 NCBI chr15:82,543,201...82,648,795
Ensembl chr15:82,543,201...82,648,861
JBrowse link
G CREBBP CREB binding protein IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:21390126 PMID:21680795 PMID:21796119 PMID:22832583 PMID:23334668 More... NCBI chr16:3,725,054...3,880,727
Ensembl chr16:3,725,054...3,880,713
JBrowse link
G CSTA cystatin A EXP CTD Direct Evidence: marker/mechanism CTD PMID:22287159 NCBI chr 3:122,325,248...122,341,969
Ensembl chr 3:122,325,248...122,341,969
JBrowse link
G CSTB cystatin B EXP CTD Direct Evidence: marker/mechanism CTD PMID:22287159 NCBI chr21:43,773,950...43,776,308
Ensembl chr21:43,772,511...43,776,330
JBrowse link
G CTNND2 catenin delta 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23917401 NCBI chr 5:10,971,836...11,904,446
Ensembl chr 5:10,971,836...11,904,446
JBrowse link
G CTSB cathepsin B IEP
EXP
protein:increased expression:glioma cell (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:22287159 PMID:17898873 RGD:2315515 NCBI chr 8:11,842,524...11,868,087
Ensembl chr 8:11,842,524...11,869,533
JBrowse link
G CTSH cathepsin H IEP protein:increased expression:brain RGD PMID:8640738 RGD:1549417 NCBI chr15:78,921,058...78,945,089
Ensembl chr15:78,921,058...78,949,574
JBrowse link
G CTSK cathepsin K EXP CTD Direct Evidence: marker/mechanism CTD PMID:25356585 NCBI chr 1:150,796,208...150,808,260
Ensembl chr 1:150,794,880...150,809,577
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16356833 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,541...73,743,716
JBrowse link
G DEUP1 deuterosome assembly protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr11:93,329,079...93,438,470
Ensembl chr11:93,329,971...93,438,487
JBrowse link
G DMBT1 deleted in malignant brain tumors 1 IAGP DNA:deletion RGD PMID:9288095 RGD:1599778 NCBI chr10:122,560,677...122,643,736
Ensembl chr10:122,560,665...122,643,736
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar NCBI chr 2:25,227,874...25,342,590
Ensembl chr 2:25,227,855...25,342,590
JBrowse link
G DUSP6 dual specificity phosphatase 6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21499306 NCBI chr12:89,347,235...89,352,501
Ensembl chr12:89,347,235...89,352,501
JBrowse link
G E2F1 E2F transcription factor 1 disease_progression IEP RGD PMID:16264179 RGD:13702471 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385
JBrowse link
G EGF epidermal growth factor susceptibility EXP
IAGP
CTD Direct Evidence: marker/mechanism
DNA:polymorphism:promoter:+61A>G(human)
CTD PMID:16598420 PMID:22481252 RGD:13702472 NCBI chr 4:109,912,883...110,013,766
Ensembl chr 4:109,912,883...110,013,766
JBrowse link
G EGFR epidermal growth factor receptor IAGP
EXP
ClinVar Annotator: match by term: Glioblastoma
ClinVar Annotator: match by term: Glioblastoma multiforme, somatic
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:2302402 PMID:15118073 PMID:15118125 PMID:15329413 PMID:15710947 More... NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 severity IEP protein:increased expression:brain (human) RGD PMID:21195542 RGD:13204719 NCBI chr 6:131,808,020...131,895,155
Ensembl chr 6:131,808,016...131,895,155
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit treatment IMP RGD PMID:25595591 RGD:14928319 NCBI chr 7:148,807,374...148,884,344
Ensembl chr 7:148,807,257...148,884,321
JBrowse link
G FABP7 fatty acid binding protein 7 severity IEP mRNA, protein:increased expression:brain (human) RGD PMID:15827123 RGD:1578468 NCBI chr 6:122,749,201...122,784,074
Ensembl chr 6:122,779,716...122,784,074
JBrowse link
G FAT1 FAT atypical cadherin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23354438 NCBI chr 4:186,587,789...186,726,696
Ensembl chr 4:186,587,794...186,726,722
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:26619011 NCBI chr 4:152,320,544...152,536,873
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:25705862 PMID:26619011 PMID:26942290 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand treatment IMP RGD PMID:18079358 RGD:11049502 NCBI chr19:49,474,172...49,487,037
Ensembl chr19:49,474,207...49,486,231
JBrowse link
G FN1 fibronectin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17099729 NCBI chr 2:215,360,862...215,436,167
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit EXP CTD Direct Evidence: marker/mechanism CTD PMID:23582323 NCBI chr 2:28,392,855...28,417,317
Ensembl chr 2:28,392,448...28,417,317
JBrowse link
G GDNF glial cell derived neurotrophic factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:19138852 NCBI chr 5:37,812,677...37,840,044
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GRIK2 glutamate ionotropic receptor kainate type subunit 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 6:101,393,708...102,070,083
Ensembl chr 6:100,962,701...102,081,622
JBrowse link
G GSTT1 glutathione S-transferase theta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16874663
G H2AX H2A.X variant histone EXP CTD Direct Evidence: marker/mechanism CTD PMID:26651356 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,854...119,095,467
JBrowse link
G H3-3A H3.3 histone A IAGP
EXP
ClinVar Annotator: match by term: Glioblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:22286216 PMID:23817572 PMID:26619011 PMID:26822237 NCBI chr 1:226,061,831...226,072,019
Ensembl chr 1:226,061,851...226,072,019
JBrowse link
G H3C2 H3 clustered histone 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22286216 NCBI chr 6:26,031,589...26,032,099
Ensembl chr 6:26,031,589...26,032,099
JBrowse link
G HEATR1 HEAT repeat containing 1 IEP mRNA, protein:increased expression:brain RGD PMID:25126583 RGD:10761721 NCBI chr 1:236,549,005...236,604,516
Ensembl chr 1:236,549,005...236,604,516
JBrowse link
G HES1 hes family bHLH transcription factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,762,371...79,767,857
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:12811834 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G HRAS HRas proto-oncogene, GTPase severity ISO
IAGP
IEP
DNA:missense mutation:cds:p.G61L(human)
ClinVar Annotator: match by term: Glioblastoma
ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... RGD:13702475, RGD:13702872 NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 disease_progression
onset
IAGP DNA:mutation:cds:p.R132(human)
ClinVar Annotator: match by term: Glioblastoma
ClinVar Annotator: match by term: Glioblastoma multiforme, somatic
DNA:mutation:cds:p.R132H(human)
ClinVar PMID:18772396 PMID:19657110 PMID:19798509 PMID:19818334 PMID:20946881 More... RGD:11074562, RGD:11522732 NCBI chr 2:208,236,227...208,255,071
Ensembl chr 2:208,236,229...208,266,074
JBrowse link
G IFNA2 interferon alpha 2 EXP CTD Direct Evidence: therapeutic CTD PMID:18679580 NCBI chr 9:21,384,255...21,385,398
Ensembl chr 9:21,384,255...21,385,398
JBrowse link
G IL16 interleukin 16 ISO protein:increased expression:brain RGD PMID:17221335 RGD:5024941 NCBI chr15:81,196,879...81,314,058
Ensembl chr15:81,159,575...81,314,058
JBrowse link
G IL1B interleukin 1 beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:16356833 NCBI chr 2:112,829,751...112,836,843
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL2 interleukin 2 EXP CTD Direct Evidence: therapeutic CTD PMID:7719933 NCBI chr 4:122,451,470...122,456,725
Ensembl chr 4:122,451,470...122,456,725
JBrowse link
G JAG1 jagged canonical Notch ligand 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999
JBrowse link
G JAG2 jagged canonical Notch ligand 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr14:105,140,981...105,168,776
Ensembl chr14:105,140,982...105,168,824
JBrowse link
G KCNC2 potassium voltage-gated channel subfamily C member 2 IEP mRNA:splice variant (human) RGD PMID:18474104 RGD:9686067 NCBI chr12:75,040,078...75,209,839
Ensembl chr12:75,040,077...75,209,839
JBrowse link
G KDR kinase insert domain receptor treatment IMP RGD PMID:26325365 RGD:11529678 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G KRAS KRAS proto-oncogene, GTPase treatment ISO
IEP
mRNA:decreased expression:brain RGD PMID:16166301 PMID:19179066 RGD:13702861, RGD:13702872 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G L1CAM L1 cell adhesion molecule IEP mRNA:decreased expression:brain, temporal lobe (human) RGD PMID:20419098 RGD:6483067 NCBI chr  X:153,861,514...153,886,173
Ensembl chr  X:153,861,514...153,886,173
JBrowse link
G LRRC56 leucine rich repeat containing 56 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr11:518,967...554,916
Ensembl chr11:537,527...554,912
JBrowse link
G LRRC59 leucine rich repeat containing 59 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr17:50,381,238...50,397,523
Ensembl chr17:50,375,059...50,397,523
JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:27270107 NCBI chr19:40,593,166...40,629,820
Ensembl chr19:40,592,883...40,629,818
JBrowse link
G LZTR1 leucine zipper like transcription regulator 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23917401 NCBI chr22:20,982,297...20,999,032
Ensembl chr22:20,982,269...20,999,032
JBrowse link
G MACIR macrophage immunometabolism regulator EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 5:103,258,374...103,278,660
Ensembl chr 5:103,258,763...103,278,660
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha treatment IDA RGD PMID:24905460 RGD:11561946 NCBI chr20:34,546,823...34,560,345
Ensembl chr20:34,546,854...34,560,345
JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 treatment IEP RGD PMID:26189368 RGD:13702862 NCBI chr19:4,090,321...4,124,184
Ensembl chr19:4,090,321...4,124,122
JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 disease_progression IEP protein:increased expression, increased phosphorylation:brain RGD PMID:17406030 RGD:1641940 NCBI chr17:21,284,679...21,315,240
Ensembl chr17:21,284,672...21,315,232
JBrowse link
G MDM2 MDM2 proto-oncogene IAGP DNA:amplication RGD PMID:23796897 RGD:13702089 NCBI chr12:68,808,149...68,850,686
Ensembl chr12:68,808,177...68,845,544
JBrowse link
G MDM4 MDM4 regulator of p53 EXP CTD Direct Evidence: marker/mechanism CTD PMID:20472715 NCBI chr 1:204,516,377...204,558,120
Ensembl chr 1:204,516,379...204,558,120
JBrowse link
G MED12 mediator complex subunit 12 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:26822237 NCBI chr  X:71,118,596...71,142,450
Ensembl chr  X:71,118,556...71,142,454
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:22162573 NCBI chr 7:116,672,196...116,798,386
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase IAGP
EXP
DNA:transition:cds:p.L84F (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:20131314 PMID:22162573 PMID:14669534 RGD:2317667 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983
JBrowse link
G MIR21 microRNA 21 ameliorates ISO RGD PMID:31730913 RGD:41404645 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337
JBrowse link
G MIR518B microRNA 518b disease_progression IEP RGD PMID:28849154 RGD:13703042 NCBI chr19:53,702,737...53,702,819
Ensembl chr19:53,702,737...53,702,819
JBrowse link
G MIR663A microRNA 663a disease_progression IEP RGD PMID:24523440 RGD:13782051 NCBI chr20:26,208,186...26,208,278
Ensembl chr20:26,208,186...26,208,278
JBrowse link
G MMP2 matrix metallopeptidase 2 severity IEP
EXP
protein:increased expression:brain (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:16598420 PMID:7616276 RGD:7207145 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691
JBrowse link
G MMP7 matrix metallopeptidase 7 severity IEP protein:increased expression:brain (human) RGD PMID:7616276 RGD:7207145 NCBI chr11:102,520,508...102,530,747
Ensembl chr11:102,520,508...102,530,750
JBrowse link
G MMP9 matrix metallopeptidase 9 severity
treatment
IEP
EXP
IMP
protein:increased expression:brain (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:16598420 PMID:7616276 PMID:12439751 RGD:7207145, RGD:8547973 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MSH2 mutS homolog 2 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:25741868 NCBI chr 2:47,403,067...47,634,501
Ensembl chr 2:47,403,067...47,663,146
JBrowse link
G MTOR mechanistic target of rapamycin kinase IAGP
EXP
ClinVar Annotator: match by term: Glioblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:24631838 PMID:25741868 PMID:26018084 PMID:26619011 PMID:27159400 More... NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:26619011 NCBI chr 2:15,940,550...15,947,004
Ensembl chr 2:15,940,550...15,947,007
JBrowse link
G MYCNOS MYCN opposite strand IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:26619011 NCBI chr 2:15,936,265...15,942,433
Ensembl chr 2:15,918,350...15,942,249
JBrowse link
G NCOR1 nuclear receptor corepressor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17312396 NCBI chr17:16,029,157...16,216,475
Ensembl chr17:16,029,157...16,218,185
JBrowse link
G NDRG1 N-myc downstream regulated 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15341671 NCBI chr 8:133,237,175...133,297,252
Ensembl chr 8:133,237,175...133,302,022
JBrowse link
G NDRG4 NDRG family member 4 IEP mRNA, protein:decreased expression:brain RGD PMID:22489821 RGD:7247726 NCBI chr16:58,463,704...58,515,403
Ensembl chr16:58,462,846...58,513,628
JBrowse link
G NF1 neurofibromin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25119042 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116
JBrowse link
G NFKBIA NFKB inhibitor alpha treatment IMP human cell line in a mouse model RGD PMID:15692608 RGD:127285387 NCBI chr14:35,401,513...35,404,749
Ensembl chr14:35,401,513...35,404,749
JBrowse link
G NOTCH1 notch receptor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G NOTCH2 notch receptor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G NOTCH3 notch receptor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr19:15,159,038...15,200,995
Ensembl chr19:15,159,038...15,200,995
JBrowse link
G NRAS NRAS proto-oncogene, GTPase IAGP ClinVar Annotator: match by term: Glioblastoma
DNA:amplication::
DNA:mutation:cds:c.35G>A, p.G12D(human)
ClinVar PMID:1654209 PMID:2278970 PMID:2674680 PMID:3122217 PMID:6587382 More... RGD:13702876, RGD:13702875 NCBI chr 1:114,704,469...114,716,771
Ensembl chr 1:114,704,469...114,716,771
JBrowse link
G PDGFB platelet derived growth factor subunit B IMP RGD PMID:21210235 RGD:6482799 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
JBrowse link
G PDGFRB platelet derived growth factor receptor beta treatment IMP RGD PMID:24566984 RGD:13702903 NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872
JBrowse link
G PDPN podoplanin IEP RGD PMID:16979138 RGD:2292241 NCBI chr 1:13,583,757...13,617,957
Ensembl chr 1:13,583,465...13,617,957
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:21858729 RGD:6771207 NCBI chr17:64,319,415...64,413,844
Ensembl chr17:64,319,415...64,413,776
JBrowse link
G PGF placental growth factor disease_progression IDA RGD PMID:20458050 RGD:6483585 NCBI chr14:74,941,830...74,955,764
Ensembl chr14:74,941,834...74,955,626
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha IAGP ClinVar Annotator: match by term: Glioblastoma
ClinVar Annotator: match by term: Glioblastoma multiforme, somatic
ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta disease_progression IEP
IMP
RGD PMID:26956052 PMID:21188471 RGD:11343921, RGD:13782050 NCBI chr 3:138,652,698...138,834,928
Ensembl chr 3:138,652,698...138,834,928
JBrowse link
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta disease_progression IEP RGD PMID:24523440 RGD:13782051 NCBI chr 1:9,629,889...9,729,114
Ensembl chr 1:9,651,731...9,729,114
JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:19962457 PMID:25157968 PMID:26619011 NCBI chr 5:68,215,737...68,301,821
Ensembl chr 5:68,215,756...68,301,821
JBrowse link
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:23724780 NCBI chr 6:37,170,152...37,175,428
Ensembl chr 6:37,170,152...37,175,428
JBrowse link
G PML PML nuclear body scaffold EXP CTD Direct Evidence: marker/mechanism CTD PMID:23440206 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:25228659 PMID:26619011 PMID:29352080 NCBI chr12:132,623,758...132,687,519
Ensembl chr12:132,623,753...132,687,376
JBrowse link
G POLK DNA polymerase kappa EXP CTD Direct Evidence: marker/mechanism CTD PMID:26651356 NCBI chr 5:75,511,891...75,601,144
Ensembl chr 5:75,511,756...75,601,144
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma IAGP ClinVar Annotator: match by term: Glioblastoma, somatic ClinVar PMID:9467001 PMID:10523018 PMID:10851250 PMID:14671186 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase EXP CTD Direct Evidence: marker/mechanism CTD PMID:19946270 NCBI chr 6:161,347,417...162,727,802
Ensembl chr 6:161,347,417...162,727,775
JBrowse link
G PROM1 prominin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18679414 PMID:18829568 PMID:19718438 NCBI chr 4:15,968,226...16,084,059
Ensembl chr 4:15,963,076...16,084,378
JBrowse link
G PTEN phosphatase and tensin homolog TAS
IAGP
ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:9140396 PMID:9241266 PMID:9259288 PMID:9399897 PMID:9467011 More... RGD:2290476 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,863,625...87,971,930
JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 disease_progression IEP
ISO
protein:increased expression:microglia, macrophage, RGD PMID:11121536 PMID:10229132 RGD:5688245, RGD:5688250 NCBI chr 9:122,369,906...122,395,703
Ensembl chr 9:122,370,530...122,395,703
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 disease_progression IEP
ISO
protein:increased expression:endothelial cell RGD PMID:11121536 PMID:10229132 RGD:5688245, RGD:5688250 NCBI chr 1:186,671,791...186,680,423
Ensembl chr 1:186,671,791...186,680,922
JBrowse link
G PTK2 protein tyrosine kinase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:12811834 NCBI chr 8:140,657,900...141,002,079
Ensembl chr 8:140,657,900...141,002,216
JBrowse link
G RB1 RB transcriptional corepressor 1 severity IDA DNA:hypermethylation:promoter: RGD PMID:11204276 RGD:13782067 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436
JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs EXP CTD Direct Evidence: therapeutic CTD PMID:20127710 NCBI chr 9:36,036,905...36,124,455
Ensembl chr 9:36,036,913...36,124,455
JBrowse link
G RPL35A ribosomal protein L35a IEP mRNA:increased expression:brain (human) RGD PMID:10880769 RGD:11535077 NCBI chr 3:197,950,190...197,956,610
Ensembl chr 3:197,950,190...197,956,610
JBrowse link
G RPL5 ribosomal protein L5 IAGP DNA:mutations:multiple (human) RGD PMID:26892688 RGD:11535147 NCBI chr 1:92,831,986...92,841,924
Ensembl chr 1:92,832,013...92,841,924
JBrowse link
G RUNX1 RUNX family transcription factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23582323 NCBI chr21:34,787,801...35,049,334
Ensembl chr21:34,787,801...36,004,667
JBrowse link
G RUNX3 RUNX family transcription factor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16909125 NCBI chr 1:24,899,511...24,965,158
Ensembl chr 1:24,899,511...24,965,121
JBrowse link
G SEPTIN14 septin 14 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23917401 NCBI chr 7:55,793,540...55,862,752
Ensembl chr 7:55,793,540...55,862,755
JBrowse link
G SERPING1 serpin family G member 1 treatment ISO RGD PMID:28880870 RGD:13525003 NCBI chr11:57,597,685...57,614,848
Ensembl chr11:57,597,387...57,619,171
JBrowse link
G SLC22A10 solute carrier family 22 member 10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr11:63,268,257...63,311,983
Ensembl chr11:63,268,022...63,311,783
JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit IAGP ClinVar Annotator: match by term: Glioblastoma multiforme ClinVar PMID:25741868 NCBI chr16:3,579,653...3,611,639
Ensembl chr16:3,581,181...3,611,606
JBrowse link
G SRRT serrate, RNA effector molecule EXP CTD Direct Evidence: marker/mechanism CTD PMID:30542699 NCBI chr 7:100,874,971...100,888,664
Ensembl chr 7:100,875,103...100,888,664
JBrowse link
G SUZ12 SUZ12 polycomb repressive complex 2 subunit EXP CTD Direct Evidence: marker/mechanism CTD PMID:25119042 NCBI chr17:31,937,007...32,001,040
Ensembl chr17:31,937,007...32,001,038
JBrowse link
G TES testin LIM domain protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:16909125 NCBI chr 7:116,210,539...116,258,786
Ensembl chr 7:116,210,506...116,258,783
JBrowse link
G TGM2 transglutaminase 2 EXP CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:16170020 PMID:17099729 NCBI chr20:38,127,385...38,166,508
Ensembl chr20:38,127,385...38,166,578
JBrowse link
G TMEM135 transmembrane protein 135 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr11:87,037,934...87,328,824
Ensembl chr11:87,037,844...87,328,824
JBrowse link
G TNC tenascin C IEP RGD PMID:16928692 RGD:4889612 NCBI chr 9:115,019,575...115,118,244
Ensembl chr 9:115,019,575...115,118,257
JBrowse link
G TNFSF10 TNF superfamily member 10 EXP CTD Direct Evidence: therapeutic CTD PMID:21877938 NCBI chr 3:172,505,508...172,523,430
Ensembl chr 3:172,505,508...172,523,475
JBrowse link
G TP53 tumor protein p53 IAGP
ISS
ClinVar Annotator: match by term: Glioblastoma
ClinVar Annotator: match by term: Glioblastoma, somatic
ClinVar
MouseDO
PMID:1349175 PMID:1359493 PMID:1467311 PMID:1565143 PMID:1565144 More... NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728
JBrowse link
G TRMT11 tRNA methyltransferase 11 homolog EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 6:125,986,453...126,079,728
Ensembl chr 6:125,986,479...126,203,817
JBrowse link
G VEGFA vascular endothelial growth factor A EXP CTD Direct Evidence: marker/mechanism CTD PMID:16356833 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G WT1 WT1 transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:20820871 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A EXP CTD Direct Evidence: marker/mechanism CTD PMID:25875864 NCBI chr19:4,043,303...4,066,899
Ensembl chr19:4,043,303...4,066,899
JBrowse link
glioblastoma proneural subtype term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RB1 RB transcriptional corepressor 1 IEP RNA:decreased expression:brain: RGD PMID:22157621 RGD:13782062 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436
JBrowse link
gliosarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL2 C-C motif chemokine ligand 2 severity ISO mouse gene in a rat model RGD PMID:7489565 RGD:11526112 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,218...34,257,203
JBrowse link
G CYP2B6 cytochrome P450 family 2 subfamily B member 6 EXP CTD Direct Evidence: therapeutic CTD PMID:9766669 PMID:11389073 NCBI chr19:40,991,282...41,018,398
Ensembl chr19:40,991,282...41,018,398
JBrowse link
G CYP2C18 cytochrome P450 family 2 subfamily C member 18 EXP CTD Direct Evidence: therapeutic CTD PMID:9766669 NCBI chr10:94,683,729...94,736,190
Ensembl chr10:94,683,729...94,736,190
JBrowse link
G PLAU plasminogen activator, urokinase severity ISO mouse gene in rat model RGD PMID:20606645 RGD:7241591 NCBI chr10:73,909,182...73,917,497
Ensembl chr10:73,909,177...73,917,496
JBrowse link
G POR cytochrome p450 oxidoreductase EXP CTD Direct Evidence: therapeutic CTD PMID:9766669 NCBI chr 7:75,915,155...75,986,855
Ensembl chr 7:75,899,200...75,986,855
JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 ISO protein:increased expression:microglia, macrophage, RGD PMID:10229132 RGD:5688250 NCBI chr 9:122,369,906...122,395,703
Ensembl chr 9:122,370,530...122,395,703
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO protein:increased expression:endothelial cell RGD PMID:10229132 RGD:5688250 NCBI chr 1:186,671,791...186,680,423
Ensembl chr 1:186,671,791...186,680,922
JBrowse link
G VEGFA vascular endothelial growth factor A EXP CTD Direct Evidence: marker/mechanism CTD PMID:16533777 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
Hirschsprung Disease Ganglioneuroblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B IAGP ClinVar Annotator: match by term: Hirschsprung disease ganglioneuroblastoma ClinVar PMID:11953745 PMID:12438263 PMID:15024693 PMID:15338462 NCBI chr 4:41,744,082...41,748,725
Ensembl chr 4:41,744,082...41,748,725
JBrowse link
malignant astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24705250 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G ADGRB1 adhesion G protein-coupled receptor B1 severity IEP RGD PMID:23761815 RGD:13831356 NCBI chr 8:142,449,649...142,545,009
Ensembl chr 8:142,449,430...142,545,009
JBrowse link
G AGAP2-AS1 AGAP2 antisense RNA 1 severity IEP RGD PMID:27764782 RGD:11571728 NCBI chr12:57,726,240...57,728,356
Ensembl chr12:57,726,271...57,728,356
JBrowse link
G AKT1 AKT serine/threonine kinase 1 disease_progression IEP RGD PMID:19240976 RGD:5509079 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751
JBrowse link
G AKT2 AKT serine/threonine kinase 2 severity IEP RGD PMID:20167810 RGD:13674163 NCBI chr19:40,230,317...40,285,531
Ensembl chr19:40,230,317...40,285,536
JBrowse link
G AKT3 AKT serine/threonine kinase 3 severity IEP RGD PMID:20167810 RGD:13674163 NCBI chr 1:243,488,233...243,851,079
Ensembl chr 1:243,488,233...243,851,079
JBrowse link
G ANXA1 annexin A1 IEP associated with Tuberous Sclerosis;mRNA:increased expression:brain RGD PMID:20133820 RGD:7421564 NCBI chr 9:73,151,865...73,170,393
Ensembl chr 9:73,151,865...73,170,393
JBrowse link
G AR androgen receptor EXP CTD Direct Evidence: marker/mechanism CTD PMID:24680642 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619
JBrowse link
G ATRX ATRX chromatin remodeler disease_progression
severity
IEP
IAGP
ClinVar Annotator: match by term: Astrocytoma, anaplastic ClinVar PMID:7697714 PMID:8968741 PMID:18414213 PMID:22995991 PMID:24082139 More... RGD:9586026, RGD:11040585 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase onset IAGP
EXP
DNA:mutation:cds:p.V600E(human)
CTD Direct Evidence: marker/mechanism
DNA:rearrangement: :
CTD PMID:23817572 PMID:25346165 PMID:19794125 RGD:11567238, RGD:11069832 NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929
JBrowse link
G BRD7 bromodomain containing 7 severity IEP protein:increased expression:brain: RGD PMID:24404152 RGD:9586441 NCBI chr16:50,315,957...50,368,988
Ensembl chr16:50,313,487...50,368,988
JBrowse link
G BST2 bone marrow stromal cell antigen 2 severity IEP RGD PMID:21565182 RGD:14398497 NCBI chr19:17,402,939...17,405,630
Ensembl chr19:17,402,939...17,405,630
JBrowse link
G CADM2 cell adhesion molecule 2 severity IDA protein:decreased expression:brain RGD PMID:30816549 RGD:19165125 NCBI chr 3:84,958,989...86,074,429
Ensembl chr 3:84,958,989...86,074,429
JBrowse link
G CAMK2G calcium/calmodulin dependent protein kinase II gamma disease_progression IEP RGD PMID:12937144 RGD:13702480 NCBI chr10:73,812,501...73,874,582
Ensembl chr10:73,812,501...73,874,591
JBrowse link
G CCND1 cyclin D1 severity IEP RGD PMID:10419598 RGD:13681931 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474
JBrowse link
G DLL3 delta like canonical Notch ligand 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr19:39,498,947...39,508,469
Ensembl chr19:39,498,895...39,508,481
JBrowse link
G ESR1 estrogen receptor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24680642 NCBI chr 6:151,654,148...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G ESR2 estrogen receptor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24680642 NCBI chr14:64,226,707...64,338,631
Ensembl chr14:64,084,232...64,338,112
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23817572 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G GSTM1 glutathione S-transferase mu 1 severity IAGP DNA:deletion: : RGD PMID:12241105 RGD:5490125 NCBI chr 1:109,687,817...109,693,745
Ensembl chr 1:109,687,814...109,709,039
JBrowse link
G GSTP1 glutathione S-transferase pi 1 susceptibility IAGP DNA:polymorphism:exon:p.A114V (human) RGD PMID:12241105 RGD:5490125 NCBI chr11:67,583,812...67,586,653
Ensembl chr11:67,583,742...67,586,656
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,762,371...79,767,857
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 6:125,747,639...125,762,243
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
G HGF hepatocyte growth factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:11223164 NCBI chr 7:81,699,006...81,770,438
Ensembl chr 7:81,699,010...81,770,438
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:15341671 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G HRAS HRas proto-oncogene, GTPase ISS MouseDO NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
JBrowse link
G IL16 interleukin 16 IEP protein:increased expression:brain RGD PMID:17221335 RGD:5024941 NCBI chr15:81,196,879...81,314,058
Ensembl chr15:81,159,575...81,314,058
JBrowse link
G KIAA1549 KIAA1549 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23817572 NCBI chr 7:138,831,377...138,981,626
Ensembl chr 7:138,831,381...138,981,389
JBrowse link
G KRAS KRAS proto-oncogene, GTPase susceptibility IAGP
ISO
EXP
sporadic pilocytic astrocytoma, OMIM:137800 DNA:transversion:CDS:amino acid G13R
DNA:mutation:cds:p.G12D(mouse)
CTD Direct Evidence: marker/mechanism
CTD PMID:23817572 PMID:16247081 PMID:24038521 RGD:1600476, RGD:13702858 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LATS1 large tumor suppressor kinase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17049657 NCBI chr 6:149,658,153...149,718,101
Ensembl chr 6:149,658,153...149,718,105
JBrowse link
G LATS2 large tumor suppressor kinase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17049657 NCBI chr13:20,973,036...21,061,586
Ensembl chr13:20,973,036...21,061,586
JBrowse link
G LINC01198 long intergenic non-protein coding RNA 1198 severity IEP RGD PMID:27764782 RGD:11571728 NCBI chr13:46,455,203...46,466,776
Ensembl chr13:46,455,131...46,515,958
JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 IEP protein:increased expression, increased phosphorylation:brain RGD PMID:17406030 RGD:1641940 NCBI chr17:21,284,679...21,315,240
Ensembl chr17:21,284,672...21,315,232
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:11223164 NCBI chr 7:116,672,196...116,798,386
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MIR155HG MIR155 host gene severity IEP RGD PMID:27764782 RGD:11571728 NCBI chr21:25,562,145...25,575,168
Ensembl chr21:25,561,909...25,575,168
JBrowse link
G MMP3 matrix metallopeptidase 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:20188714 NCBI chr11:102,835,801...102,843,609
Ensembl chr11:102,835,801...102,843,609
JBrowse link
G MMP9 matrix metallopeptidase 9 EXP CTD Direct Evidence: marker/mechanism CTD PMID:20188714 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease severity IEP mRNA:decreased expression:brain tumor (human) RGD PMID:17034947 RGD:2317736 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,570...94,493,885
JBrowse link
G NCOA3 nuclear receptor coactivator 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24680642 NCBI chr20:47,501,887...47,656,872
Ensembl chr20:47,501,887...47,656,877
JBrowse link
G NDRG1 N-myc downstream regulated 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15341671 NCBI chr 8:133,237,175...133,297,252
Ensembl chr 8:133,237,175...133,302,022
JBrowse link
G NEDD8 NEDD8 ubiquitin like modifier IEP RGD PMID:12533840 RGD:1549458 NCBI chr14:24,216,857...24,232,367
Ensembl chr14:24,216,857...24,232,367
JBrowse link
G NF1 neurofibromin 1 ISO
EXP
IEP
CTD Direct Evidence: marker/mechanism
protein:decreased expression:brain:
CTD PMID:20176786 PMID:23817572 PMID:10973261 PMID:10931370 RGD:1302542, RGD:12743656 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116
JBrowse link
G NOTCH1 notch receptor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G NOTCH2 notch receptor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23817572 NCBI chr 9:84,668,458...85,027,070
Ensembl chr 9:84,668,551...85,027,054
JBrowse link
G PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase IEP protein:decreased expression,decreased activity:brain: RGD PMID:15857672 RGD:10448283 NCBI chr 6:149,749,695...149,811,421
Ensembl chr 6:149,749,443...149,811,420
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23817572 NCBI chr12:112,418,915...112,509,918
Ensembl chr12:112,418,351...112,509,918
JBrowse link
G TP53 tumor protein p53 susceptibility ISO
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Astrocytoma, anaplastic
DNA:nonsense mutation:cds:
CTD
ClinVar
PMID:1349175 PMID:1565143 PMID:1565144 PMID:1591732 PMID:7565304 More... RGD:13702858 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TPT1-AS1 TPT1 antisense RNA 1 severity IEP RGD PMID:27764782 RGD:11571728 NCBI chr13:45,341,345...45,391,483
Ensembl chr13:45,341,345...45,417,975
JBrowse link
medulloblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway IAGP
EXP
associated with Adenomatous Polyposis Coli;DNA:mutations: :
CTD Direct Evidence: marker/mechanism
CTD PMID:7661930 PMID:17238184 RGD:6484523 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,498...112,846,239
JBrowse link
G ARID1A AT-rich interaction domain 1A IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26822237 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G ARID1B AT-rich interaction domain 1B IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26822237 NCBI chr 6:156,776,026...157,210,779
Ensembl chr 6:156,776,020...157,210,779
JBrowse link
G ATOH1 atonal bHLH transcription factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18347096 NCBI chr 4:93,828,753...93,830,964
Ensembl chr 4:93,828,753...93,830,964
JBrowse link
G BAP1 BRCA1 associated protein 1 IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:25741868 PMID:26719535 PMID:28492532 NCBI chr 3:52,401,004...52,410,030
Ensembl chr 3:52,401,008...52,410,008
JBrowse link
G BRCA2 BRCA2 DNA repair associated ISO
IAGP
ClinVar Annotator: match by term: Medulloblastoma, somatic ClinVar
OMIM
PMID:8673090 PMID:9150172 PMID:9667259 PMID:9792861 PMID:10644434 More... RGD:11038793 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268
JBrowse link
G BRD2 bromodomain containing 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24231268 NCBI chr 6:32,968,594...32,981,505
Ensembl chr 6:32,968,594...32,981,505
JBrowse link
G BRD3 bromodomain containing 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24231268 NCBI chr 9:134,030,305...134,068,533
Ensembl chr 9:134,030,305...134,068,535
JBrowse link
G BRD4 bromodomain containing 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24231268 PMID:31594641 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545
JBrowse link
G CCND1 cyclin D1 ISO RGD PMID:16943274 RGD:13681932 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474
JBrowse link
G CCNE1 cyclin E1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr19:29,811,991...29,824,312
Ensembl chr19:29,811,991...29,824,312
JBrowse link
G CDK6 cyclin dependent kinase 6 disease_progression EXP
IEP
CTD Direct Evidence: marker/mechanism CTD PMID:19270706 PMID:23138228 PMID:16314645 RGD:13702096 NCBI chr 7:92,604,921...92,836,573
Ensembl chr 7:92,604,921...92,836,573
JBrowse link
G CDK9 cyclin dependent kinase 9 EXP CTD Direct Evidence: marker/mechanism CTD PMID:31594641 NCBI chr 9:127,786,034...127,790,792
Ensembl chr 9:127,785,679...127,790,792
JBrowse link
G CREBBP CREB binding protein IAGP ClinVar Annotator: match by term: Medulloblastoma
ClinVar Annotator: match by term: Medulloblastoma, somatic
ClinVar PMID:21390126 PMID:21680795 PMID:21796119 PMID:22832583 PMID:23334668 More... NCBI chr16:3,725,054...3,880,727
Ensembl chr16:3,725,054...3,880,713
JBrowse link
G CTNNB1 catenin beta 1 IAGP ClinVar Annotator: match by term: Medulloblastoma
ClinVar Annotator: match by term: Medulloblastoma, somatic
ClinVar
OMIM
PMID:9065402 PMID:9065403 PMID:9294210 PMID:9927029 PMID:10027390 More... NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26822237 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472
JBrowse link
G DICER1 dicer 1, ribonuclease III IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:25741868 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G DNMT1 DNA methyltransferase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19155313 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286
JBrowse link
G EHMT1 euchromatic histone lysine methyltransferase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr 9:137,619,001...137,836,127
Ensembl chr 9:137,618,992...137,870,016
JBrowse link
G EP300 E1A binding protein p300 IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26619011 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,592...41,180,077
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:20168248 NCBI chr17:39,688,094...39,728,660
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G ESR2 estrogen receptor 2 EXP CTD Direct Evidence: therapeutic CTD PMID:21351254 NCBI chr14:64,226,707...64,338,631
Ensembl chr14:64,084,232...64,338,112
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 IAGP ClinVar Annotator: match by term: Medulloblastoma, somatic ClinVar PMID:26619011 NCBI chr 4:152,320,544...152,536,873
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:10766980 PMID:23819449 PMID:25705862 PMID:25741868 PMID:26619011 More... NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FLI1 Fli-1 proto-oncogene, ETS transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr11:128,685,263...128,813,267
Ensembl chr11:128,686,535...128,813,267
JBrowse link
G FOXO3 forkhead box O3 IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26822237 NCBI chr 6:108,559,825...108,684,774
Ensembl chr 6:108,559,835...108,684,774
JBrowse link
G GSTM1 glutathione S-transferase mu 1 IAGP DNA:deletion: : RGD PMID:18952980 RGD:5490237 NCBI chr 1:109,687,817...109,693,745
Ensembl chr 1:109,687,814...109,709,039
JBrowse link
G GSTT1 glutathione S-transferase theta 1 IAGP DNA:deletion: : RGD PMID:18952980 RGD:5490237
G HIC1 HIC ZBTB transcriptional repressor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18347096 NCBI chr17:2,055,103...2,063,241
Ensembl chr17:2,054,154...2,063,241
JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 IAGP ClinVar Annotator: match by term: Medulloblastoma, somatic ClinVar PMID:18772396 PMID:19657110 PMID:19798509 PMID:19818334 PMID:20946881 More... NCBI chr 2:208,236,227...208,255,071
Ensembl chr 2:208,236,229...208,266,074
JBrowse link
G IFNG interferon gamma ISS OMIM:155255 MouseDO NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IRS2 insulin receptor substrate 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr13:109,752,695...109,786,583
Ensembl chr13:109,752,695...109,786,583
JBrowse link
G KAT6A lysine acetyltransferase 6A EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr 8:41,929,479...42,051,988
Ensembl chr 8:41,929,479...42,051,994
JBrowse link
G KDM4B lysine demethylase 4B IEP
EXP
mRNA:increased expression:brain (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:19270706 PMID:19270706 RGD:9587481 NCBI chr19:4,969,087...5,153,603
Ensembl chr19:4,969,113...5,153,598
JBrowse link
G KDM4C lysine demethylase 4C IEP
EXP
mRNA:increased expression:brain (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:19270706 PMID:19270706 RGD:9587481 NCBI chr 9:6,720,863...7,175,648
Ensembl chr 9:6,720,863...7,175,648
JBrowse link
G L3MBTL2 L3MBTL histone methyl-lysine binding protein 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr22:41,205,192...41,231,271
Ensembl chr22:41,205,282...41,231,271
JBrowse link
G L3MBTL3 L3MBTL histone methyl-lysine binding protein 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr 6:130,018,581...130,141,440
Ensembl chr 6:130,013,699...130,141,449
JBrowse link
G LOC100507346 uncharacterized LOC100507346 IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr 9:95,463,609...95,470,019 JBrowse link
G MPL MPL proto-oncogene, thrombopoietin receptor EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr 1:43,336,875...43,354,466
Ensembl chr 1:43,337,818...43,354,466
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 PMID:31694585 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G MYCL MYCL proto-oncogene, bHLH transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr 1:39,895,428...39,901,917
Ensembl chr 1:39,895,426...39,902,256
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor IAGP
EXP
ClinVar Annotator: match by term: Medulloblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:19270706 PMID:26619011 NCBI chr 2:15,940,550...15,947,004
Ensembl chr 2:15,940,550...15,947,007
JBrowse link
G MYCNOS MYCN opposite strand IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26619011 NCBI chr 2:15,936,265...15,942,433
Ensembl chr 2:15,918,350...15,942,249
JBrowse link
G NONO non-POU domain containing octamer binding IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26822237 NCBI chr  X:71,283,635...71,301,168
Ensembl chr  X:71,254,814...71,301,522
JBrowse link
G NRAS NRAS proto-oncogene, GTPase IAGP ClinVar Annotator: match by term: Medulloblastoma, somatic ClinVar PMID:2407301 PMID:2674680 PMID:2989702 PMID:3102434 PMID:8120410 More... NCBI chr 1:114,704,469...114,716,771
Ensembl chr 1:114,704,469...114,716,771
JBrowse link
G OTX2 orthodenticle homeobox 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr14:56,799,905...56,810,479
Ensembl chr14:56,799,905...56,816,693
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha severity EXP
IEP
CTD Direct Evidence: marker/mechanism CTD PMID:19270706 PMID:25576913 RGD:13702904 NCBI chr 4:54,229,127...54,298,245
Ensembl chr 4:54,229,280...54,298,245
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha IAGP ClinVar Annotator: match by term: Medulloblastoma, somatic ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma EXP CTD Direct Evidence: marker/mechanism CTD PMID:21652733 NCBI chr 7:106,865,282...106,908,980
Ensembl chr 7:106,865,278...106,908,980
JBrowse link
G PRAME PRAME nuclear receptor transcriptional regulator EXP CTD Direct Evidence: marker/mechanism CTD PMID:16179254 NCBI chr22:22,547,701...22,559,294
Ensembl chr22:22,547,701...22,559,361
JBrowse link
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26822237 PMID:28492532 NCBI chr17:68,413,623...68,551,316
Ensembl chr17:68,511,780...68,551,319
JBrowse link
G PRMT5 protein arginine methyltransferase 5 EXP CTD Direct Evidence: therapeutic CTD PMID:31694585 NCBI chr14:22,920,526...22,929,392
Ensembl chr14:22,920,525...22,929,408
JBrowse link
G PTCH1 patched 1 EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Medulloblastoma
CTD
ClinVar
PMID:18347096 PMID:19155313 PMID:19213072 PMID:25741868 PMID:28492532 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G PTCH2 patched 2 IAGP OMIM NCBI chr 1:44,819,845...44,843,253
Ensembl chr 1:44,819,844...44,843,253
JBrowse link
G RASSF1 Ras association domain family member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21880625 NCBI chr 3:50,329,786...50,340,836
Ensembl chr 3:50,329,782...50,340,980
JBrowse link
G RB1 RB transcriptional corepressor 1 ISO
IAGP
ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:25741868 PMID:28492532 PMID:10783170 RGD:1302544 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436
JBrowse link
G RET ret proto-oncogene IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:11436122 PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351
JBrowse link
G S100A10 S100 calcium binding protein A10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17579622 NCBI chr 1:151,982,915...151,993,859
Ensembl chr 1:151,982,915...151,993,859
JBrowse link
G S100A4 S100 calcium binding protein A4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17579622 NCBI chr 1:153,543,621...153,545,806
Ensembl chr 1:153,543,613...153,550,136
JBrowse link
G S100A6 S100 calcium binding protein A6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17579622 NCBI chr 1:153,534,599...153,536,049
Ensembl chr 1:153,534,599...153,536,244
JBrowse link
G SCG5 secretogranin V EXP CTD Direct Evidence: marker/mechanism CTD PMID:17334394 NCBI chr15:32,641,710...32,697,092
Ensembl chr15:32,641,676...32,697,098
JBrowse link
G SCML2 Scm polycomb group protein like 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr  X:18,239,313...18,355,089
Ensembl chr  X:18,239,313...18,354,688
JBrowse link
G SF3B2 splicing factor 3b subunit 2 IAGP ClinVar Annotator: match by term: Medulloblastoma, somatic ClinVar PMID:26619011 NCBI chr11:66,052,361...66,069,308
Ensembl chr11:66,050,729...66,069,308
JBrowse link
G SKP2 S-phase kinase associated protein 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr 5:36,152,067...36,184,319
Ensembl chr 5:36,151,989...36,196,849
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:26822237 NCBI chr19:10,960,999...11,062,277
Ensembl chr19:10,960,932...11,079,426
JBrowse link
G SMO smoothened, frizzled class receptor IAGP
ISS
ClinVar Annotator: match by term: Medulloblastoma
OMIM:155255
ClinVar
MouseDO
PMID:19726788 PMID:22679179 PMID:25759020 NCBI chr 7:129,188,633...129,213,548
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
G SMYD4 SET and MYND domain containing 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr17:1,779,485...1,829,902
Ensembl chr17:1,779,485...1,830,634
JBrowse link
G STAT3 signal transducer and activator of transcription 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19001435 NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,540
JBrowse link
G STRADA STE20 related adaptor alpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:21652733 NCBI chr17:63,702,832...63,741,986
Ensembl chr17:63,682,336...63,741,986
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling IAGP ClinVar Annotator: match by term: Medulloblastoma, desmoplastic
ClinVar Annotator: match by term: Medulloblastoma with extensive nodularity
ClinVar Annotator: match by term: Medulloblastoma, somatic
ClinVar
OMIM
PMID:12068298 PMID:16199547 PMID:19533801 PMID:19833601 PMID:21188540 More... RGD:1599191 NCBI chr10:102,502,801...102,633,535
Ensembl chr10:102,503,972...102,633,535
JBrowse link
G TP53 tumor protein p53 disease_progression ISO
IAGP
IEP
ClinVar Annotator: match by term: Medulloblastoma, somatic
protein:increased expression:nucleus:
ClinVar PMID:1359493 PMID:1565143 PMID:1565144 PMID:1631137 PMID:1644930 More... RGD:1302544, RGD:8547823 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TSC2 TSC complex subunit 2 IAGP DNA:polymorphism:intron RGD PMID:11603814 RGD:11072879 NCBI chr16:2,047,804...2,089,491
Ensembl chr16:2,047,967...2,089,491
JBrowse link
G VAV1 vav guanine nucleotide exchange factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19270706 NCBI chr19:6,772,708...6,857,366
Ensembl chr19:6,772,708...6,857,366
JBrowse link
G WRN WRN RecQ like helicase IAGP ClinVar Annotator: match by term: Medulloblastoma ClinVar PMID:8968742 PMID:9225981 PMID:16673358 PMID:16786514 PMID:20301687 More... NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
melanoma and neural system tumor syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN2A cyclin dependent kinase inhibitor 2A IAGP ClinVar Annotator: match by term: Melanoma astrocytoma syndrome
ClinVar Annotator: match by term: Melanoma and neural system tumor syndrome
ClinVar
OMIM
PMID:7566978 PMID:7647780 PMID:7718873 PMID:7987387 PMID:8570179 More... NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301
JBrowse link
neuroblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:8761367 NCBI chr 7:87,503,017...87,713,295
Ensembl chr 7:87,503,017...87,713,323
JBrowse link
G ALK ALK receptor tyrosine kinase IAGP
EXP
ClinVar Annotator: match by term: Neuroblastoma Susceptibility
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:2124297 PMID:18724359 PMID:18923523 PMID:18923524 PMID:18923525 More... NCBI chr 2:29,190,992...29,921,589
Ensembl chr 2:29,192,774...29,921,586
JBrowse link
G ALOX5AP arachidonate 5-lipoxygenase activating protein IEP mRNA, protein:increased expression:neuroblastoma (human) RGD PMID:18591367 RGD:2313903 NCBI chr13:30,713,485...30,764,426
Ensembl chr13:30,713,478...30,764,426
JBrowse link
G ARID1A AT-rich interaction domain 1A IAGP
EXP
DNA:mutations,loss of heterozygosity: :
CTD Direct Evidence: marker/mechanism
CTD PMID:23202128 PMID:23202128 RGD:13439724 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G ARID1B AT-rich interaction domain 1B IAGP
EXP
DNA:deletion,haploinsufficiency: :
CTD Direct Evidence: marker/mechanism
CTD PMID:23202128 PMID:23202128 RGD:13439724 NCBI chr 6:156,776,026...157,210,779
Ensembl chr 6:156,776,020...157,210,779
JBrowse link
G ATRX ATRX chromatin remodeler EXP CTD Direct Evidence: marker/mechanism CTD PMID:23334666 PMID:26523776 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G AURKA aurora kinase A EXP CTD Direct Evidence: marker/mechanism CTD PMID:22588779 NCBI chr20:56,369,390...56,392,308
Ensembl chr20:56,369,389...56,392,337
JBrowse link
G BARD1 BRCA1 associated RING domain 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19412175 PMID:23334666 NCBI chr 2:214,725,645...214,809,683
Ensembl chr 2:214,725,646...214,809,683
JBrowse link
G BCHE butyrylcholinesterase EXP CTD Direct Evidence: marker/mechanism CTD PMID:2317787 NCBI chr 3:165,772,904...165,837,423
Ensembl chr 3:165,772,904...165,837,462
JBrowse link
G BRCA1 BRCA1 DNA repair associated IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:15385441 PMID:16267036 PMID:25741868 PMID:26287763 PMID:26467025 More... NCBI chr17:43,044,295...43,125,364
Ensembl chr17:43,044,295...43,170,245
JBrowse link
G BRCA2 BRCA2 DNA repair associated IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:16284991 PMID:19043619 PMID:20127978 PMID:21702907 PMID:22034289 More... NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268
JBrowse link
G CD55 CD55 molecule (Cromer blood group) ISO RGD PMID:10850450 RGD:2326181 NCBI chr 1:207,321,674...207,360,966
Ensembl chr 1:207,321,532...207,386,804
JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A treatment IDA
EXP
CTD Direct Evidence: marker/mechanism CTD PMID:15814359 PMID:24714808 RGD:10043806 NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301
JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A disease_progression IEP
IMP
mRNA:increased expression: : RGD PMID:24335960 PMID:24335960 RGD:9587458, RGD:9587458 NCBI chr19:4,402,596...4,448,322
Ensembl chr19:4,402,640...4,445,018
JBrowse link
G CHD5 chromodomain helicase DNA binding protein 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26121086 NCBI chr 1:6,101,787...6,180,321
Ensembl chr 1:6,101,787...6,180,321
JBrowse link
G CHD6 chromodomain helicase DNA binding protein 6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18577749 NCBI chr20:41,402,083...41,618,377
Ensembl chr20:41,402,083...41,618,384
JBrowse link
G CHEK2 checkpoint kinase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23334666 NCBI chr22:28,687,743...28,741,866
Ensembl chr22:28,687,743...28,742,422
JBrowse link
G DBH dopamine beta-hydroxylase EXP CTD Direct Evidence: marker/mechanism CTD PMID:25174395 NCBI chr 9:133,636,363...133,659,329
Ensembl chr 9:133,636,363...133,659,329
JBrowse link
G DOCK8 dedicator of cytokinesis 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26121086 NCBI chr 9:211,296...465,260
Ensembl chr 9:214,854...465,259
JBrowse link
G ESR1 estrogen receptor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:27366082 NCBI chr 6:151,654,148...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G FANCA FA complementation group A IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:15059067 PMID:24584348 PMID:27041517 NCBI chr16:89,737,549...89,816,647
Ensembl chr16:89,737,549...89,816,657
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:10766980 PMID:23819449 PMID:25741868 PMID:26619011 PMID:26822237 More... NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26822237 NCBI chr 4:1,793,293...1,808,872
Ensembl chr 4:1,793,293...1,808,872
JBrowse link
G GATA3 GATA binding protein 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30127528 NCBI chr10:8,045,420...8,075,198
Ensembl chr10:8,045,378...8,075,198
JBrowse link
G GNAS GNAS complex locus EXP CTD Direct Evidence: marker/mechanism CTD PMID:20862257 NCBI chr20:58,839,681...58,911,192
Ensembl chr20:58,839,718...58,911,192
JBrowse link
G HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22941191 NCBI chr 6:104,728,094...104,859,919
Ensembl chr 6:104,728,094...104,859,919
JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30127528 NCBI chr 4:173,526,091...173,530,229
Ensembl chr 4:173,524,969...173,530,229
JBrowse link
G HGF hepatocyte growth factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:16051641 NCBI chr 7:81,699,006...81,770,438
Ensembl chr 7:81,699,010...81,770,438
JBrowse link
G HRAS HRas proto-oncogene, GTPase EXP CTD Direct Evidence: marker/mechanism CTD PMID:15814359 PMID:26121086 NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
JBrowse link
G IFNB1 interferon beta 1 EXP CTD Direct Evidence: therapeutic CTD PMID:16115947 NCBI chr 9:21,077,104...21,077,942
Ensembl chr 9:21,077,104...21,077,942
JBrowse link
G IGF1R insulin like growth factor 1 receptor IMP protein: decreased tyrosine phosphorylation: : Y1131 RGD PMID:17121898 RGD:7242922 NCBI chr15:98,648,539...98,964,530
Ensembl chr15:98,648,539...98,964,530
JBrowse link
G IL18 interleukin 18 susceptibility ISO RGD PMID:16428511 RGD:8655920 NCBI chr11:112,143,251...112,164,104
Ensembl chr11:112,143,253...112,164,096
JBrowse link
G ISL1 ISL LIM homeobox 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30127528 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730
JBrowse link
G KIF1B kinesin family member 1B susceptibility IAGP
EXP
ClinVar Annotator: match by term: Neuroblastoma
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: NEUROBLASTOMA, SUSCEPTIBILITY TO, 1
ClinVar
CTD
OMIM
PMID:18334619 PMID:18726616 PMID:24033266 PMID:24469107 PMID:25741868 More... NCBI chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603
JBrowse link
G KRAS KRAS proto-oncogene, GTPase EXP CTD Direct Evidence: marker/mechanism CTD PMID:26121086 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LIN28B lin-28 homolog B EXP CTD Direct Evidence: marker/mechanism CTD PMID:22941191 PMID:23042116 NCBI chr 6:104,936,999...105,083,332
Ensembl chr 6:104,936,616...105,083,332
JBrowse link
G LOC112577475 Sharpr-MPRA regulatory region 11911 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26822237 NCBI chr 1:110,341,287...110,341,581 JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26822237 NCBI chr17:12,020,822...12,143,828
Ensembl chr17:12,020,829...12,143,830
JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26822237 NCBI chr19:7,903,785...7,914,478
Ensembl chr19:7,903,843...7,914,478
JBrowse link
G MEN1 menin 1 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:25741868 NCBI chr11:64,803,514...64,811,294
Ensembl chr11:64,803,510...64,811,294
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase IAGP
EXP
ClinVar Annotator: match by term: Neuroblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:16051641 PMID:26822237 NCBI chr 7:116,672,196...116,798,386
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MT-CO2 mitochondrially encoded cytochrome c oxidase II EXP CTD Direct Evidence: marker/mechanism CTD PMID:15492235 NCBI chr MT:7,586...8,269
Ensembl chr MT:7,586...8,269
JBrowse link
G MTFP1 mitochondrial fission process 1 severity IEP mRNA:increased expression:neural tissue (human) RGD PMID:27765905 RGD:12880392 NCBI chr22:30,425,768...30,429,054
Ensembl chr22:30,425,623...30,429,054
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor IAGP
EXP
ClinVar Annotator: match by term: Neuroblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:8761367 PMID:25157968 PMID:26619011 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor IAGP
EXP
ClinVar Annotator: match by term: Neuroblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:16051641 PMID:16989911 PMID:17283129 PMID:18353067 PMID:22286764 More... NCBI chr 2:15,940,550...15,947,004
Ensembl chr 2:15,940,550...15,947,007
JBrowse link
G MYCNOS MYCN opposite strand IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26619011 NCBI chr 2:15,936,265...15,942,433
Ensembl chr 2:15,918,350...15,942,249
JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 IAGP RGD PMID:8047138 RGD:1600229 NCBI chr17:51,153,559...51,162,168
Ensembl chr17:51,153,559...51,162,428
JBrowse link
G NNAT neuronatin EXP CTD Direct Evidence: marker/mechanism CTD PMID:17762496 NCBI chr20:37,521,250...37,523,690
Ensembl chr20:37,521,206...37,523,690
JBrowse link
G NRAS NRAS proto-oncogene, GTPase EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: NEUROBLASTOMA, SUSCEPTIBILITY TO
CTD
ClinVar
PMID:2674680 PMID:8120410 PMID:10821536 PMID:12460918 PMID:15899789 More... NCBI chr 1:114,704,469...114,716,771
Ensembl chr 1:114,704,469...114,716,771
JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 severity IAGP DNA:hypermethylation:promoter:CpG islands (human) RGD PMID:20018718 RGD:9590155 NCBI chr 5:177,131,835...177,300,213
Ensembl chr 5:177,133,025...177,300,213
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 disease_progression IEP
EXP
CTD Direct Evidence: marker/mechanism CTD PMID:16989911 PMID:8433391 RGD:5684545 NCBI chr 1:156,815,750...156,881,850
Ensembl chr 1:156,815,640...156,881,850
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 IAGP
EXP
ClinVar Annotator: match by term: Neuroblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:16051641 PMID:26822237 NCBI chr 9:84,668,458...85,027,070
Ensembl chr 9:84,668,551...85,027,054
JBrowse link
G PAK4 p21 (RAC1) activated kinase 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:29048629 NCBI chr19:39,125,786...39,182,816
Ensembl chr19:39,125,770...39,182,816
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 IDA human tumor in mouse model RGD PMID:22174364 RGD:6767296 NCBI chr17:64,319,415...64,413,844
Ensembl chr17:64,319,415...64,413,776
JBrowse link
G PHF6 PHD finger protein 6 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26822237 NCBI chr  X:134,373,312...134,428,790
Ensembl chr  X:134,373,312...134,428,791
JBrowse link
G PHOX2B paired like homeobox 2B IAGP
EXP
ClinVar Annotator: match by term: Neuroblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:25174395 PMID:30127528 NCBI chr 4:41,744,082...41,748,725
Ensembl chr 4:41,744,082...41,748,725
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26619011 NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PINK1 PTEN induced kinase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23334666 NCBI chr 1:20,633,458...20,651,511
Ensembl chr 1:20,633,458...20,651,511
JBrowse link
G PRAME PRAME nuclear receptor transcriptional regulator severity IEP mRNA:increased expression:neural tissue (human) RGD PMID:15240516 RGD:11535044 NCBI chr22:22,547,701...22,559,294
Ensembl chr22:22,547,701...22,559,361
JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30871063 NCBI chr 2:161,308,425...161,411,717
Ensembl chr 2:161,308,425...161,411,717
JBrowse link
G PTCH1 patched 1 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 IAGP
EXP
ClinVar Annotator: match by term: Neuroblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:11704759 PMID:12634870 PMID:12717436 PMID:14644997 PMID:14974085 More... NCBI chr12:112,418,915...112,509,918
Ensembl chr12:112,418,351...112,509,918
JBrowse link
G PTPN14 protein tyrosine phosphatase non-receptor type 14 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26121086 NCBI chr 1:214,348,700...214,551,677
Ensembl chr 1:214,348,700...214,552,449
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G RASSF1 Ras association domain family member 1 TAS RGD PMID:12222680 PMID:17325427 RGD:2291977, RGD:2291979 NCBI chr 3:50,329,786...50,340,836
Ensembl chr 3:50,329,782...50,340,980
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G RASSF5 Ras association domain family member 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18452173 NCBI chr 1:206,507,531...206,589,448
Ensembl chr 1:206,507,531...206,589,448
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G RBM15 RNA binding motif protein 15 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26822237 NCBI chr 1:110,339,377...110,346,677
Ensembl chr 1:110,338,506...110,346,681
JBrowse link
G SCNN1A sodium channel epithelial 1 subunit alpha disease_progression IEP Low levels of methylation correlate with improved survival RGD PMID:21314941 RGD:5509791 NCBI chr12:6,346,847...6,377,359
Ensembl chr12:6,346,843...6,377,730
JBrowse link
G SEMA3B semaphorin 3B EXP CTD Direct Evidence: marker/mechanism CTD PMID:17452250 NCBI chr 3:50,267,652...50,277,546
Ensembl chr 3:50,267,558...50,277,546
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G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:25741868 NCBI chr19:10,960,999...11,062,277
Ensembl chr19:10,960,932...11,079,426
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G SNRPE small nuclear ribonucleoprotein polypeptide E severity IEP mRNA:decreased expression:neuroblastoma (human) RGD PMID:17075126 RGD:10755762 NCBI chr 1:203,861,599...203,871,152
Ensembl chr 1:203,861,599...203,871,152
JBrowse link
G TBX2 T-box transcription factor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30127528 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
G TERT telomerase reverse transcriptase EXP CTD Direct Evidence: marker/mechanism CTD PMID:26523776 NCBI chr 5:1,253,167...1,295,068
Ensembl chr 5:1,253,147...1,295,068
JBrowse link
G TH tyrosine hydroxylase EXP CTD Direct Evidence: marker/mechanism CTD PMID:25174395 NCBI chr11:2,163,929...2,174,081
Ensembl chr11:2,163,929...2,171,815
JBrowse link
G TNFSF10 TNF superfamily member 10 EXP CTD Direct Evidence: therapeutic CTD PMID:16820965 NCBI chr 3:172,505,508...172,523,430
Ensembl chr 3:172,505,508...172,523,475
JBrowse link
G TP53 tumor protein p53 ISO
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Neuroblastoma
ClinVar Annotator: match by term: NEUROBLASTOMA, SUSCEPTIBILITY TO, 1
ClinVar Annotator: match by term: Neuroblastoma Susceptibility
CTD
ClinVar
PMID:7651740 PMID:9546439 PMID:10064694 PMID:10864200 PMID:11896595 More... NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TP73 tumor protein p73 no_association IAGP RGD PMID:9288759 RGD:1599583 NCBI chr 1:3,652,516...3,736,201
Ensembl chr 1:3,652,516...3,736,201
JBrowse link
G TSC1 TSC complex subunit 1 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:25741868 NCBI chr 9:132,891,349...132,945,269
Ensembl chr 9:132,891,348...132,946,874
JBrowse link
G TSC2 TSC complex subunit 2 IAGP ClinVar Annotator: match by term: Neuroblastoma ClinVar PMID:26822237 NCBI chr16:2,047,804...2,089,491
Ensembl chr16:2,047,967...2,089,491
JBrowse link
G