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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:extrahepatic bile duct adenocarcinoma
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Accession:DOID:3495 term browser browse the term
Definition:An extrahepatic bile duct carcinoma that derives_from epithelial cells of glandular origin. (DO)
Synonyms:exact_synonym: adenocarcinoma of extrahepatic bile duct;   extrahepatic cholangiocarcinoma;   extrahepatic cholangiocarcinomas
 related_synonym: adenocarcinoma of the extrahepatic bile duct
 xref: NCI:C7975
For additional species annotation, visit the Alliance of Genome Resources.



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extrahepatic bile duct adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bap1 Brca1 associated protein 1 disease_progression ISO RGD PMID:25536104 RGD:150340631 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535
JBrowse link
G Pbrm1 polybromo 1 disease_progression ISO RGD PMID:25536104 RGD:150340631 NCBI chr16:6,213,507...6,312,895
Ensembl chr16:6,213,300...6,311,780
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17435
    disease of cellular proliferation 7088
      Neoplasms by Histologic Type 4800
        cell type cancer 3429
          carcinoma 2947
            adenocarcinoma 1496
              bile duct adenocarcinoma 96
                extrahepatic bile duct adenocarcinoma 2
                  extrahepatic bile duct small cell adenocarcinoma 0
                  papillary extrahepatic bile duct adenocarcinoma 0
Path 2
Term Annotations click to browse term
  disease 17435
    disease of anatomical entity 16766
      gastrointestinal system disease 6237
        Digestive System Neoplasms 3457
          Gastrointestinal Neoplasms 3335
            gastrointestinal system benign neoplasm 176
              hepatobiliary benign neoplasm 140
                biliary tract benign neoplasm 111
                  Bile Duct Neoplasms 108
                    bile duct cancer 106
                      bile duct carcinoma 96
                        bile duct adenocarcinoma 96
                          cholangiocarcinoma 96
                            extrahepatic bile duct carcinoma 2
                              extrahepatic bile duct adenocarcinoma 2
                                extrahepatic bile duct small cell adenocarcinoma 0
                                papillary extrahepatic bile duct adenocarcinoma 0
paths to the root