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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:liposarcoma
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Accession:DOID:3382 term browser browse the term
Definition:A connective tissue cancer that arises in fat cells in deep soft tissue retroperitoneum and the extremities. (DO)
Synonyms:exact_synonym: lipomatous cancer;   liposarcomas;   malignant lipomatous tumor;   malignant tumor of Adipose tissue
 primary_id: MESH:D008080
 alt_id: DOID:3939
 xref: GARD:6913;   NCI:C3194;   NCI:C4501;   NCI:C60434;   ORDO:69078
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
 
liposarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk4 cyclin-dependent kinase 4 ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:20601955 PMID:23569312 NCBI chr 7:62,885,647...62,889,562
Ensembl chr 7:62,883,105...62,942,403
JBrowse link
G Fasn fatty acid synthase ISO CTD Direct Evidence: therapeutic CTD PMID:20372807 NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
JBrowse link
G Fus FUS RNA binding protein ISO RGD PMID:20332486 RGD:5509913 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414
JBrowse link
G Il22 interleukin 22 ISS MouseDO NCBI chr 7:53,801,206...53,805,673
Ensembl chr 7:53,801,206...53,806,186
JBrowse link
G Mir155 microRNA 155 disease_progression ISO RGD PMID:28036291 RGD:25314299 NCBI chr11:23,774,654...23,774,718
Ensembl chr11:23,774,654...23,774,718
JBrowse link
G Nf1 neurofibromin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20601955 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Yeats4 YEATS domain containing 4 ISO CTD Direct Evidence: therapeutic CTD PMID:20601955 NCBI chr 7:52,858,313...52,865,454
Ensembl chr 7:52,858,305...52,865,635
JBrowse link
myxoid liposarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddit3 DNA-damage inducible transcript 3 ISO DNA:translocation: ;t(12;16)(q13;p11)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:1283316 PMID:7503811 PMID:8510758 PMID:1283316 RGD:1599726 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Fus FUS RNA binding protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:7503811 PMID:8510758 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17240
    disease of cellular proliferation 7045
      cancer 5000
        cell type cancer 3406
          sarcoma 245
            liposarcoma 8
              Retroperitoneal Liposarcoma 0
              adult liposarcoma 0
              breast liposarcoma 0
              childhood liposarcoma 0
              cutaneous liposarcoma 0
              dedifferentiated liposarcoma 0
              esophagus liposarcoma 0
              fibroblastic liposarcoma 0
              gastric liposarcoma 0
              intracranial liposarcoma 0
              kidney liposarcoma 0
              larynx liposarcoma 0
              liposarcoma of bone 0
              liposarcoma of the ovary + 0
              mediastinum liposarcoma 0
              mixed liposarcoma 0
              mixed-type liposarcoma 0
              myxoid liposarcoma + 2
              pleomorphic liposarcoma 0
              vulvar liposarcoma 0
              well-differentiated liposarcoma + 0
Path 2
Term Annotations click to browse term
  disease 17240
    disease of cellular proliferation 7045
      Neoplasms by Site 6687
        organ system cancer 4832
          musculoskeletal system cancer 726
            connective tissue cancer 706
              liposarcoma 8
                Retroperitoneal Liposarcoma 0
                adult liposarcoma 0
                breast liposarcoma 0
                childhood liposarcoma 0
                cutaneous liposarcoma 0
                dedifferentiated liposarcoma 0
                esophagus liposarcoma 0
                fibroblastic liposarcoma 0
                gastric liposarcoma 0
                intracranial liposarcoma 0
                kidney liposarcoma 0
                larynx liposarcoma 0
                liposarcoma of bone 0
                liposarcoma of the ovary + 0
                mediastinum liposarcoma 0
                mixed liposarcoma 0
                mixed-type liposarcoma 0
                myxoid liposarcoma + 2
                pleomorphic liposarcoma 0
                vulvar liposarcoma 0
                well-differentiated liposarcoma + 0
paths to the root