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ONTOLOGY REPORT - ANNOTATIONS


Term:skin benign neoplasm
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Accession:DOID:3165 term browser browse the term
Definition:A benign proliferation in the skin.
Synonyms:exact_synonym: benign neoplasm of skin;   benign tumor of skin;   neoplasm of skin;   neoplasm of skin by site;   skin neoplasm;   tumor of the skin
 primary_id: RDO:9000113
 xref: NCI:C3372
For additional species annotation, visit the Alliance of Genome Resources.


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skin benign neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:11098548
angiokeratoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gla galactosidase, alpha JBrowse link X 105,405,915 105,417,331 RGD:11554173
G Naga alpha-N-acetylgalactosaminidase JBrowse link 7 123,563,047 123,572,074 RGD:1600558
anogenital venereal wart term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:7483603
G Ifna1 interferon, alpha 1 JBrowse link 5 106,951,822 106,952,908 RGD:36174028
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:7829774
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:7829774
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:27226706
capillary hemangioma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link 18 3,616,878 3,662,656 RGD:8554872
Capillary Hemangioma, Infantile term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Antxr1 ANTXR cell adhesion molecule 1 JBrowse link 4 118,946,267 119,131,202 RGD:7240710
RGD:8554872
G Flt4 Fms related receptor tyrosine kinase 4 JBrowse link 10 35,078,782 35,120,296 RGD:7240710
RGD:8554872
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:7240710
RGD:8554872
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:8554872
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:12879502
cerebellar angioblastoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:8554872
epidermal appendage tumor term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmem207 transmembrane protein 207 JBrowse link 11 77,644,539 77,664,616 RGD:13592920
epidermodysplasia verruciformis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmc6 transmembrane channel like 6 JBrowse link 10 106,766,857 106,783,004 RGD:11554173
RGD:8554872
G Tmc8 transmembrane channel-like 8 JBrowse link 10 106,784,819 106,795,307 RGD:8554872
Epidermodysplasia Verruciformis 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmc6 transmembrane channel like 6 JBrowse link 10 106,766,857 106,783,004 RGD:8554872
RGD:7240710
G Tmc8 transmembrane channel-like 8 JBrowse link 10 106,784,819 106,795,307 RGD:8554872
Epidermodysplasia Verruciformis 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmc8 transmembrane channel-like 8 JBrowse link 10 106,784,819 106,795,307 RGD:8554872
RGD:7240710
Epidermodysplasia Verruciformis 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cib1 calcium and integrin binding 1 JBrowse link 1 142,014,962 142,020,461 RGD:8554872
RGD:7240710
Epidermodysplasia Verruciformis 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rhoh ras homolog family member H JBrowse link 14 43,961,756 43,992,587 RGD:8554872
RGD:7240710
Epidermodysplasia Verruciformis 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il7 interleukin 7 JBrowse link 2 96,427,884 96,474,979 RGD:7240710
RGD:8554872
hemangioblastoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:11554173
G Ndrg1 N-myc downstream regulated 1 JBrowse link 7 107,734,326 107,775,701 RGD:11554173
leiomyoma cutis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fh fumarate hydratase JBrowse link 13 93,651,486 93,677,371 RGD:8554872
Malignant Granular Cell Tumor term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brd7 bromodomain containing 7 JBrowse link 19 19,672,780 19,701,484 RGD:8554872
Muir-Torre syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link 15 15,697,292 16,862,873 RGD:13592920
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:7240710
RGD:8554872
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:7240710
RGD:8554872
Nasopalpebral Lipoma Coloboma Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zdbf2 zinc finger, DBF-type containing 2 JBrowse link 9 70,052,088 70,090,847 RGD:8554872
pilomatrixoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:7240710
RGD:8554872
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:8554872
G Ovol1 ovo like transcriptional repressor 1 JBrowse link 1 220,927,309 220,938,814 RGD:11554173
G Ovol2 ovo-like zinc finger 2 JBrowse link 3 138,433,990 138,464,511 RGD:11554173
Pulmonary Venoocclusive Disease 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link 3 110,159,624 110,245,382 RGD:7240710
RGD:8554872
Schopf-Schulz-Passarge syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt10a Wnt family member 10A JBrowse link 9 82,053,581 82,066,047 RGD:7240710
RGD:8554872
sebaceous gland neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:8662839
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:11554173
seborrheic keratosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:7421562
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link 14 82,272,322 82,287,739 RGD:8554872
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:7240710
RGD:8554872
skin papilloma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:7483622
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:8746700
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:8553046
Trichilemmoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:12738400
von Hippel-Lindau disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:7240710
RGD:8554872
G Epas1 endothelial PAS domain protein 1 JBrowse link 6 10,306,508 10,385,239 RGD:11041600
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:7241233
G Slc18a1 solute carrier family 18 member A1 JBrowse link 16 22,358,646 22,395,183 RGD:5131200
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:7240710
RGD:8554872
RGD:11554173
WHIM syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cxcr4 C-X-C motif chemokine receptor 4 JBrowse link 13 45,314,952 45,318,856 RGD:734860
RGD:8554872
RGD:11554173
RGD:7240710
G Dars aspartyl-tRNA synthetase JBrowse link 13 45,074,067 45,127,815 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16021
    sensory system disease 4979
      skin disease 2654
        Skin Neoplasms 228
          skin benign neoplasm 48
            Benign Skin Neoplasms, Epithelial + 14
            angiokeratoma of Fordyce + 0
            benign dermal neurilemmoma 0
            clear cell acanthoma 0
            cutaneous fibrous histiocytoma 0
            cutaneous ganglioneuroma 0
            dermis tumor + 1
            dermoid cyst of skin 0
            epidermal appendage tumor 1
            eyelid benign neoplasm + 2
            granular cell tumor + 1
            hair follicle neoplasm + 5
            sebaceous gland neoplasm + 5
            seborrheic keratosis + 3
            skin glomangioma + 0
            skin granular cell tumor 0
            skin hemangioma + 16
            skin lipoma 0
            skin meningioma 0
            sweat gland benign neoplasm + 0
Path 2
Term Annotations click to browse term
  disease 16021
    disease of anatomical entity 15274
      nervous system disease 10770
        sensory system disease 4979
          skin disease 2654
            Skin Neoplasms 228
              skin benign neoplasm 48
                Benign Skin Neoplasms, Epithelial + 14
                angiokeratoma of Fordyce + 0
                benign dermal neurilemmoma 0
                clear cell acanthoma 0
                cutaneous fibrous histiocytoma 0
                cutaneous ganglioneuroma 0
                dermis tumor + 1
                dermoid cyst of skin 0
                epidermal appendage tumor 1
                eyelid benign neoplasm + 2
                granular cell tumor + 1
                hair follicle neoplasm + 5
                sebaceous gland neoplasm + 5
                seborrheic keratosis + 3
                skin glomangioma + 0
                skin granular cell tumor 0
                skin hemangioma + 16
                skin lipoma 0
                skin meningioma 0
                sweat gland benign neoplasm + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.