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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:high grade glioma
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Accession:DOID:3070 term browser browse the term
Definition:A cell type cancer that has_material_basis_in glial cells and is located in brain or located in spine. (DO)
Synonyms:exact_synonym: Glial Cell Tumor;   Gliomas;   glial cell tumors;   glioma;   malignant glioma;   malignant gliomas;   malignant neuroglial tumor;   neuroglial tumor
 narrow_synonym: ASTROCYTOMA;   BRAINSTEM GLIOMA;   EPENDYMOMA;   oligodendroglioma;   rosette-forming glioneuronal tumor;   subependymoma
 broad_synonym: GLM
 related_synonym: GLM1;   GLM2;   GLM3;   GLM4;   GLM5;   GLM6;   GLM8;   GLM9;   glioma susceptibility 1;   glioma susceptibility 2;   glioma susceptibility 3;   glioma susceptibility 4;   glioma susceptibility 5;   glioma susceptibility 6;   glioma susceptibility 8;   glioma susceptibility 9
 primary_id: MESH:D005910
 alt_id: OMIM:137800;   OMIM:607248;   OMIM:613028;   OMIM:613029;   OMIM:613030;   OMIM:613031;   OMIM:613033;   OMIM:616568
 xref: NCI:C129297;   NCI:C3059;   NCI:C4822;   NCI:C64069;   OMIM:PS137800;   ORDO:182067
For additional species annotation, visit the Alliance of Genome Resources.


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high grade glioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 IAGP
EXP
ClinVar Annotator: match by term: Brainstem glioma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:818090 PMID:7068725 PMID:19085907 PMID:19330033 PMID:22977237 More... NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G ADGRA2 adhesion G protein-coupled receptor A2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 8:37,796,883...37,844,896
Ensembl chr 8:37,784,191...37,844,896
JBrowse link
G AKT2 AKT serine/threonine kinase 2 IEP
ISO
protein:increased expression:cytoplasm (human) RGD PMID:19330838 PMID:19330838 RGD:2313297, RGD:2313297 NCBI chr19:40,230,317...40,285,531
Ensembl chr19:40,230,317...40,285,536
JBrowse link
G ANGPT1 angiopoietin 1 TAS RGD PMID:16389943 RGD:1578345 NCBI chr 8:107,249,482...107,497,918
Ensembl chr 8:107,249,482...107,498,055
JBrowse link
G ANGPT2 angiopoietin 2 ISO protein:increased expression:brain (rat) RGD PMID:18615861 RGD:2314189 NCBI chr 8:6,499,632...6,563,245
Ensembl chr 8:6,499,632...6,563,409
JBrowse link
G APOD apolipoprotein D EXP CTD Direct Evidence: marker/mechanism CTD PMID:16865689 NCBI chr 3:195,568,705...195,583,940
Ensembl chr 3:195,568,705...195,584,033
JBrowse link
G ARAF A-Raf proto-oncogene, serine/threonine kinase disease_progression IEP RGD PMID:27852048 RGD:13702476 NCBI chr  X:47,561,205...47,571,908
Ensembl chr  X:47,561,205...47,571,908
JBrowse link
G AREG amphiregulin ISO RGD PMID:8621257 RGD:2292668 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G ARHGAP32 Rho GTPase activating protein 32 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:128,965,060...129,279,518
Ensembl chr11:128,965,060...129,279,324
JBrowse link
G ARID1B AT-rich interaction domain 1B IAGP ClinVar Annotator: match by term: Astrocytoma ClinVar PMID:25741868 NCBI chr 6:156,776,026...157,210,779
Ensembl chr 6:156,776,020...157,210,779
JBrowse link
G ARL2 ADP ribosylation factor like GTPase 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,014,160...65,022,184
Ensembl chr11:65,014,160...65,022,184
JBrowse link
G ASPM assembly factor for spindle microtubules disease_progression IEP mRNA:increased expression:brain: RGD PMID:20142996 RGD:13442488 NCBI chr 1:197,084,127...197,146,669
Ensembl chr 1:197,084,121...197,146,694
JBrowse link
G ATG2A autophagy related 2A IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,894,546...64,917,241
Ensembl chr11:64,894,546...64,917,211
JBrowse link
G ATG7 autophagy related 7 treatment ISO RGD PMID:25542083 RGD:11557994 NCBI chr 3:11,272,348...11,564,652
Ensembl chr 3:11,272,309...11,557,665
JBrowse link
G ATM ATM serine/threonine kinase IAGP ClinVar Annotator: match by term: Malignant glioma ClinVar PMID:8659541 PMID:8808599 PMID:9000145 PMID:9463314 PMID:10330348 More... NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,223,044...108,369,102
JBrowse link
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16865689 NCBI chr17:7,646,627...7,657,770
Ensembl chr17:7,646,627...7,657,770
JBrowse link
G ATRX ATRX chromatin remodeler IAGP
EXP
DNA:mutations: :multiple
CTD Direct Evidence: marker/mechanism
CTD PMID:23583981 PMID:24705251 PMID:23104868 RGD:11040587 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G BAD BCL2 associated agonist of cell death ISO
IAGP
protein:increased phosphorylation:brain (rat)
ClinVar Annotator: match by term: Brainstem glioma
ClinVar PMID:16944316 RGD:2292675 NCBI chr11:64,269,828...64,284,704
Ensembl chr11:64,269,830...64,284,704
JBrowse link
G BANP BTG3 associated nuclear protein IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr16:87,949,216...88,077,318
Ensembl chr16:87,949,244...88,077,318
JBrowse link
G BARHL1 BarH like homeobox 1 IEP protein:increased expression:brain: RGD PMID:28956815 RGD:14390165 NCBI chr 9:132,582,606...132,590,252
Ensembl chr 9:132,582,606...132,590,252
JBrowse link
G BATF2 basic leucine zipper ATF-like transcription factor 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,987,945...64,996,971
Ensembl chr11:64,987,945...64,997,018
JBrowse link
G BCAN brevican severity ISO
IEP
protein:increased expression:brain: RGD PMID:12799382 PMID:23253190 PMID:16061654 PMID:11585735 RGD:14392782, RGD:14392804, RGD:14392797, RGD:14392783 NCBI chr 1:156,642,117...156,659,528
Ensembl chr 1:156,641,390...156,659,532
JBrowse link
G BDKRB2 bradykinin receptor B2 ISO mRNA:increased expression:brain RGD PMID:20080302 RGD:4891047 NCBI chr14:96,204,839...96,244,164
Ensembl chr14:96,204,679...96,244,166
JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 ISO protein:increased expression:brain RGD PMID:17701349 RGD:2293131 NCBI chr17:78,214,253...78,225,635
Ensembl chr17:78,214,186...78,225,636
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger EXP CTD Direct Evidence: marker/mechanism CTD PMID:23383216 NCBI chr10:22,321,099...22,331,484
Ensembl chr10:22,321,099...22,331,484
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Brainstem glioma
CTD
ClinVar
PMID:12068308 PMID:12198537 PMID:12447372 PMID:12460918 PMID:12460919 More... NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929
JBrowse link
G BRCA2 BRCA2 DNA repair associated IAGP ClinVar Annotator: match by term: Glioma susceptibility 3 OMIM
ClinVar
PMID:8673090 PMID:9150172 PMID:9667259 PMID:9792861 PMID:10644434 More... NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268
JBrowse link
G BRD7 bromodomain containing 7 IEP protein:increased expression:brain: RGD PMID:24404152 RGD:9586441 NCBI chr16:50,315,957...50,368,988
Ensembl chr16:50,313,487...50,368,988
JBrowse link
G C11orf65 chromosome 11 open reading frame 65 IAGP ClinVar Annotator: match by term: Malignant glioma ClinVar PMID:8659541 PMID:8808599 PMID:9000145 PMID:9463314 PMID:10330348 More... NCBI chr11:108,308,519...108,469,832
Ensembl chr11:108,308,519...108,467,531
JBrowse link
G C3 complement C3 treatment ISO RGD PMID:21678475 RGD:7401275 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CACNG2 calcium voltage-gated channel auxiliary subunit gamma 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr22:36,560,857...36,703,752
Ensembl chr22:36,560,857...36,703,752
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha disease_progression IEP RGD PMID:29393370 RGD:13702478 NCBI chr 5:150,219,491...150,290,130
Ensembl chr 5:150,219,491...150,290,093
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta disease_progression ISO RGD PMID:15750623 RGD:13702479 NCBI chr 7:44,217,154...44,326,167
Ensembl chr 7:44,217,150...44,334,577
JBrowse link
G CAMKK2 calcium/calmodulin dependent protein kinase kinase 2 disease_progression IEP RGD PMID:27012733 RGD:13674178 NCBI chr12:121,237,692...121,297,819
Ensembl chr12:121,237,675...121,298,308
JBrowse link
G CAPN1 calpain 1 IAGP ClinVar Annotator: match by term: Brainstem glioma ClinVar NCBI chr11:65,181,373...65,212,006
Ensembl chr11:65,180,566...65,212,006
JBrowse link
G CAT catalase EXP CTD Direct Evidence: marker/mechanism CTD PMID:21138464 NCBI chr11:34,438,934...34,472,060
Ensembl chr11:34,438,934...34,472,060
JBrowse link
G CATSPERZ catsper channel auxiliary subunit zeta IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,300,358...64,304,770
Ensembl chr11:64,300,358...64,304,770
JBrowse link
G CAV1 caveolin 1 ISO RGD PMID:22528460 RGD:6784517 NCBI chr 7:116,525,009...116,561,185
Ensembl chr 7:116,524,994...116,561,179
JBrowse link
G CAV2 caveolin 2 ISO RGD PMID:22528460 RGD:6784517 NCBI chr 7:116,499,738...116,508,541
Ensembl chr 7:116,287,380...116,508,541
JBrowse link
G CCDC26 CCDC26 long non-coding RNA EXP CTD Direct Evidence: marker/mechanism CTD PMID:19578367 NCBI chr 8:129,351,694...129,680,239
Ensembl chr 8:128,634,199...129,683,770
JBrowse link
G CCDC88B coiled-coil domain containing 88B IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,340,203...64,357,534
Ensembl chr11:64,340,204...64,357,534
JBrowse link
G CCND1 cyclin D1 susceptibility
disease_progression
IAGP
ISO
IEP
RGD PMID:22304571 PMID:21844184 PMID:21844184 RGD:13681930, RGD:13702091, RGD:13702091 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474
JBrowse link
G CCR4 C-C motif chemokine receptor 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17522861 NCBI chr 3:32,951,555...32,956,349
Ensembl chr 3:32,951,644...32,956,349
JBrowse link
G CD40 CD40 molecule treatment ISO RGD PMID:24878890 RGD:11352275 NCBI chr20:46,118,242...46,129,858
Ensembl chr20:46,118,278...46,129,863
JBrowse link
G CD80 CD80 molecule ISO RGD PMID:10078962 RGD:727266 NCBI chr 3:119,524,293...119,559,614
Ensembl chr 3:119,524,293...119,559,614
JBrowse link
G CDC42BPG CDC42 binding protein kinase gamma IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,823,052...64,844,686
Ensembl chr11:64,823,052...64,844,653
JBrowse link
G CDC42EP2 CDC42 effector protein 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,314,866...65,322,417
Ensembl chr11:65,314,866...65,322,417
JBrowse link
G CDCA5 cell division cycle associated 5 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,061,009...65,084,129
Ensembl chr11:65,066,300...65,084,164
JBrowse link
G CDK4 cyclin dependent kinase 4 disease_progression IEP
ISO
RGD PMID:23761023 PMID:21844184 RGD:13702090, RGD:13702091 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CDK6 cyclin dependent kinase 6 severity IEP
IAGP
DNA:amplification: RGD PMID:22736304 PMID:9102208 RGD:13702093, RGD:13702094 NCBI chr 7:92,604,921...92,836,573
Ensembl chr 7:92,604,921...92,836,573
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A severity
treatment
IDA
IMP
IEP
DNA:hypermethylation:promoter: RGD PMID:20844987 PMID:9144534 PMID:18791688 RGD:13702125, RGD:13702129, RGD:13702128 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337
JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A disease_progression IAGP
EXP
DNA:deletions
CTD Direct Evidence: marker/mechanism
CTD PMID:15814359 PMID:19578367 PMID:11314047 RGD:8552305 NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301
JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B EXP CTD Direct Evidence: marker/mechanism CTD PMID:19578366 PMID:19578367 NCBI chr 9:22,002,903...22,009,313
Ensembl chr 9:22,002,903...22,009,305
JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A susceptibility IAGP DNA:SNP:intron:rs243356(human) RGD PMID:18048407 RGD:9587459 NCBI chr19:4,402,596...4,448,322
Ensembl chr19:4,402,640...4,445,018
JBrowse link
G CHAF1B chromatin assembly factor 1 subunit B disease_progression IEP protein:increased expression:brain: RGD PMID:24039914 RGD:9587472 NCBI chr21:36,380,145...36,419,015
Ensembl chr21:36,385,392...36,419,015
JBrowse link
G CHEK2 checkpoint kinase 2 IAGP ClinVar Annotator: match by term: Malignant glioma ClinVar PMID:10617473 PMID:11053450 PMID:11479205 PMID:11719428 PMID:11967536 More... NCBI chr22:28,687,743...28,741,866
Ensembl chr22:28,687,743...28,742,422
JBrowse link
G CHI3L1 chitinase 3 like 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:20506295 NCBI chr 1:203,178,931...203,186,704
Ensembl chr 1:203,178,931...203,186,704
JBrowse link
G CLCN2 chloride voltage-gated channel 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:12843258 NCBI chr 3:184,346,185...184,361,605
Ensembl chr 3:184,346,185...184,361,650
JBrowse link
G CLCN3 chloride voltage-gated channel 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:12843258 NCBI chr 4:169,620,578...169,723,673
Ensembl chr 4:169,612,633...169,723,673
JBrowse link
G CLCN5 chloride voltage-gated channel 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:12843258 NCBI chr  X:49,922,596...50,099,231
Ensembl chr  X:49,922,596...50,099,235
JBrowse link
G CNTN2 contactin 2 severity IEP mRNA, protein:increased expression:brain (human) RGD PMID:11280781 RGD:734799 NCBI chr 1:205,042,937...205,078,289
Ensembl chr 1:205,042,937...205,078,289
JBrowse link
G COX8A cytochrome c oxidase subunit 8A IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:63,974,620...63,976,543
Ensembl chr11:63,974,620...63,976,543
JBrowse link
G CSF1 colony stimulating factor 1 ISO RGD PMID:15728459 RGD:2293641 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G CTSB cathepsin B ISO RGD PMID:17287256 RGD:2315520 NCBI chr 8:11,842,524...11,868,087
Ensembl chr 8:11,842,524...11,869,533
JBrowse link
G CXCR3 C-X-C motif chemokine receptor 3 ISO RGD PMID:16434036 RGD:5135509 NCBI chr  X:71,615,913...71,618,515
Ensembl chr  X:71,615,916...71,618,511
JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 IAGP DNA:snp:promoter:c.-1053C>T (human) RGD PMID:12540498 RGD:1358568 NCBI chr10:133,527,363...133,539,123
Ensembl chr10:133,520,406...133,561,220
JBrowse link
G DCN decorin disease_progression IMP RGD PMID:15475879 RGD:2311425 NCBI chr12:91,140,484...91,182,817
Ensembl chr12:91,140,484...91,183,217
JBrowse link
G DCX doublecortin disease_progression
treatment
ISO
IEP
RGD PMID:17178868 PMID:21477071 PMID:19681167 RGD:12904748, RGD:12904761, RGD:12904754 NCBI chr  X:111,293,779...111,412,205
Ensembl chr  X:111,293,779...111,412,429
JBrowse link
G DEPDC5 DEP domain containing 5, GATOR1 subcomplex subunit IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr22:31,753,968...31,908,033
Ensembl chr22:31,753,867...31,908,033
JBrowse link
G DLK1 delta like non-canonical Notch ligand 1 IEP RGD PMID:16288219 RGD:1625600 NCBI chr14:100,726,892...100,738,224
Ensembl chr14:100,725,705...100,738,224
JBrowse link
G DMXL1 Dmx like 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16865689 NCBI chr 5:119,071,002...119,249,432
Ensembl chr 5:119,037,772...119,249,138
JBrowse link
G DNAJC4 DnaJ heat shock protein family (Hsp40) member C4 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,230,432...64,234,281
Ensembl chr11:64,230,278...64,234,286
JBrowse link
G DPF2 double PHD fingers 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,333,840...65,354,262
Ensembl chr11:65,333,852...65,354,262
JBrowse link
G DUSP29 dual specificity phosphatase 29 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr10:75,026,427...75,073,827
Ensembl chr10:75,037,472...75,073,642
JBrowse link
G E2F1 E2F transcription factor 1 severity IEP RGD PMID:28042322 RGD:13702468 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385
JBrowse link
G E2F3 E2F transcription factor 3 disease_progression IEP RGD PMID:28337965 RGD:13702470 NCBI chr 6:20,401,879...20,493,714
Ensembl chr 6:20,401,879...20,493,714
JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 IEP protein:increased expression:brain: RGD PMID:19887559 RGD:10401656 NCBI chr 2:55,865,967...55,924,163
Ensembl chr 2:55,865,967...55,924,139
JBrowse link
G EFL1 elongation factor like GTPase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25015090 NCBI chr15:82,130,223...82,262,734
Ensembl chr15:82,130,233...82,262,734
JBrowse link
G EGF epidermal growth factor susceptibility IAGP DNA:polymorphism:promoter:+61A>G(human)
DNA:polymorphism:promoter:GG genotypes were associated with increased risk.
RGD PMID:22106858 PMID:17473192 RGD:13702473, RGD:13702474 NCBI chr 4:109,912,883...110,013,766
Ensembl chr 4:109,912,883...110,013,766
JBrowse link
G EGFR epidermal growth factor receptor treatment IEP
ISO
IAGP
protein:alternative form:tumor (human)
ClinVar Annotator: match by term: Brainstem glioma
ClinVar PMID:17177598 PMID:26619011 PMID:7606735 PMID:10616092 RGD:5131512, RGD:38599219 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G EHBP1L1 EH domain binding protein 1 like 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,576,034...65,592,650
Ensembl chr11:65,576,046...65,592,650
JBrowse link
G EHD1 EH domain containing 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,851,642...64,879,693
Ensembl chr11:64,851,642...64,888,296
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 IDA RGD PMID:19558578 RGD:9685528 NCBI chr 9:137,048,107...137,054,061
Ensembl chr 9:137,048,107...137,054,061
JBrowse link
G EPHA5 EPH receptor A5 IAGP ClinVar Annotator: match by term: Astrocytoma ClinVar PMID:25741868 NCBI chr 4:65,319,567...65,670,489
Ensembl chr 4:65,319,563...65,670,495
JBrowse link
G EPO erythropoietin IMP RGD PMID:21749867 RGD:10400910 NCBI chr 7:100,720,468...100,723,700
Ensembl chr 7:100,720,468...100,723,700
JBrowse link
G EPOR erythropoietin receptor IMP RGD PMID:21749867 RGD:10400910 NCBI chr19:11,377,207...11,384,314
Ensembl chr19:11,377,207...11,384,342
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 susceptibility IAGP
EXP
ClinVar Annotator: match by term: Glioma susceptibility 1
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:15457249 NCBI chr17:39,688,094...39,728,660
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit susceptibility IAGP DNA:snp:3'utr:c.8092C>A (human) (rs3212986) RGD PMID:25867436 RGD:13207318 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit susceptibility IAGP RGD PMID:11319176 RGD:10401082 NCBI chr19:45,349,837...45,370,647
Ensembl chr19:45,349,837...45,370,918
JBrowse link
G ESRRA estrogen related receptor alpha IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,305,524...64,316,743
Ensembl chr11:64,305,497...64,316,743
JBrowse link
G F2 coagulation factor II, thrombin treatment ISO RGD PMID:15975137 RGD:1578509 NCBI chr11:46,719,213...46,739,506
Ensembl chr11:46,719,196...46,739,506
JBrowse link
G FAM107A family with sequence similarity 107 member A EXP CTD Direct Evidence: marker/mechanism CTD PMID:16865689 NCBI chr 3:58,564,117...58,627,610
Ensembl chr 3:58,564,117...58,627,610
JBrowse link
G FAM89B family with sequence similarity 89 member B IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,572,538...65,574,190
Ensembl chr11:65,572,349...65,574,198
JBrowse link
G FAS Fas cell surface death receptor severity ISO mouse gene in a rat model RGD PMID:11440439 RGD:8663460 NCBI chr10:88,968,429...89,017,059
Ensembl chr10:88,990,531...89,017,059
JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion IAGP ClinVar Annotator: match by term: Brainstem glioma ClinVar NCBI chr11:65,120,630...65,122,134
Ensembl chr11:65,120,630...65,122,177
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18931460 NCBI chr 4:152,320,544...152,536,873
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
G FERMT3 FERM domain containing kindlin 3 IAGP ClinVar Annotator: match by term: Brainstem glioma ClinVar NCBI chr11:64,205,920...64,223,891
Ensembl chr11:64,206,678...64,223,891
JBrowse link
G FGF2 fibroblast growth factor 2 EXP CTD Direct Evidence: therapeutic CTD PMID:10673511 NCBI chr 4:122,826,708...122,898,236
Ensembl chr 4:122,826,708...122,898,236
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 IAGP
EXP
ClinVar Annotator: match by term: Brainstem glioma
ClinVar Annotator: match by term: Rosette-forming glioneuronal tumor
ClinVar Annotator: match by term: Astrocytoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:10766980 PMID:23583981 PMID:23819449 PMID:25705862 PMID:25741868 More... NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FKBP2 FKBP prolyl isomerase 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,241,095...64,244,135
Ensembl chr11:64,241,003...64,244,132
JBrowse link
G FLRT1 fibronectin leucine rich transmembrane protein 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,035,931...64,127,289
Ensembl chr11:64,035,931...64,119,173
JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand treatment IMP RGD PMID:15564139 RGD:11049500 NCBI chr19:49,474,172...49,487,037
Ensembl chr19:49,474,207...49,486,231
JBrowse link
G FRMD8 FERM domain containing 8 IAGP ClinVar Annotator: match by term: Brainstem glioma ClinVar NCBI chr11:65,386,637...65,413,525
Ensembl chr11:65,386,621...65,413,525
JBrowse link
G FTH1 ferritin heavy chain 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21385903 NCBI chr11:61,964,285...61,967,634
Ensembl chr11:61,959,718...61,967,634
JBrowse link
G GDNF glial cell derived neurotrophic factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:19138852 NCBI chr 5:37,812,677...37,840,044
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GJA1 gap junction protein alpha 1 ISO RGD PMID:22808518 RGD:7207264 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G GLB1 galactosidase beta 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 3:32,961,108...33,097,146
Ensembl chr 3:32,996,609...33,097,202
JBrowse link
G GON4L gon-4 like IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 1:155,749,659...155,859,431
Ensembl chr 1:155,749,659...155,859,400
JBrowse link
G GPHA2 glycoprotein hormone subunit alpha 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,934,471...64,938,131
Ensembl chr11:64,934,471...64,935,893
JBrowse link
G GPR137 G protein-coupled receptor 137 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,270,337...64,289,500
Ensembl chr11:64,270,062...64,289,500
JBrowse link
G GSTM1 glutathione S-transferase mu 1 severity IAGP RGD PMID:10965818 RGD:5490163 NCBI chr 1:109,687,817...109,693,745
Ensembl chr 1:109,687,814...109,709,039
JBrowse link
G GSTM3 glutathione S-transferase mu 3 IAGP DNA: deletion: intron 6 RGD PMID:16598069 RGD:5688743 NCBI chr 1:109,733,937...109,741,038
Ensembl chr 1:109,733,932...109,741,038
JBrowse link
G GSTP1 glutathione S-transferase pi 1 susceptibility IAGP
EXP
DNA:polymorphism:exon:p.I105V (rs1695) (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:16899598 PMID:15006924 RGD:5490124 NCBI chr11:67,583,812...67,586,653
Ensembl chr11:67,583,742...67,586,656
JBrowse link
G H3-3A H3.3 histone A IAGP
EXP
ClinVar Annotator: match by term: Brainstem glioma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:22286216 PMID:23583981 PMID:26619011 NCBI chr 1:226,061,831...226,072,019
Ensembl chr 1:226,061,851...226,072,019
JBrowse link
G H3C11 H3 clustered histone 11 IAGP ClinVar Annotator: match by term: Brainstem glioma ClinVar PMID:26619011 NCBI chr 6:27,871,845...27,872,346
Ensembl chr 6:27,871,845...27,872,346
JBrowse link
G H3C2 H3 clustered histone 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22286216 NCBI chr 6:26,031,589...26,032,099
Ensembl chr 6:26,031,589...26,032,099
JBrowse link
G HDAC3 histone deacetylase 3 disease_progression IEP
IAGP
mRNA,protein:increased expression:brain:
ClinVar Annotator: match by term: Ependymoma
ClinVar PMID:23685192 RGD:9590201 NCBI chr 5:141,620,881...141,636,849
Ensembl chr 5:141,620,876...141,636,849
JBrowse link
G HELLS helicase, lymphoid specific severity IEP RGD PMID:28042322 RGD:13702468 NCBI chr10:94,545,778...94,613,905
Ensembl chr10:94,501,434...94,613,905
JBrowse link
G HGF hepatocyte growth factor disease_progression IEP protein:increased expression:brain: RGD PMID:12115353 RGD:8548633 NCBI chr 7:81,699,006...81,770,438
Ensembl chr 7:81,699,010...81,770,438
JBrowse link
G HLA-A major histocompatibility complex, class I, A EXP CTD Direct Evidence: marker/mechanism CTD PMID:14511464 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,945,884
JBrowse link
G HLA-B major histocompatibility complex, class I, B EXP CTD Direct Evidence: marker/mechanism CTD PMID:14511464 NCBI chr 6:31,353,875...31,357,179
Ensembl chr 6:31,353,872...31,357,188
JBrowse link
G HLA-C major histocompatibility complex, class I, C EXP CTD Direct Evidence: marker/mechanism CTD PMID:14511464 NCBI chr 6:31,268,749...31,272,092
Ensembl chr 6:31,268,749...31,272,130
JBrowse link
G HMGB1 high mobility group box 1 treatment ISO RGD PMID:10830965 RGD:10402059 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HMGN5 high mobility group nucleosome binding domain 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22109888 NCBI chr  X:81,113,699...81,201,913
Ensembl chr  X:81,113,699...81,201,913
JBrowse link
G HRAS HRas proto-oncogene, GTPase EXP CTD Direct Evidence: marker/mechanism CTD PMID:30619488 NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
JBrowse link
G HSD3B2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 1:119,414,931...119,423,034
Ensembl chr 1:119,414,931...119,423,035
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 IEP protein:increased expression RGD PMID:21112319 RGD:5685704 NCBI chr 9:125,234,853...125,241,343
Ensembl chr 9:125,234,853...125,241,382
JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 susceptibility IAGP
EXP
ClinVar Annotator: match by term: Brainstem glioma
CTD Direct Evidence: marker/mechanism
ClinVar
OMIM
CTD
PMID:18772396 PMID:19657110 PMID:19798509 PMID:19818334 PMID:19901110 More... NCBI chr 2:208,236,227...208,255,071
Ensembl chr 2:208,236,229...208,266,074
JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 IAGP ClinVar Annotator: match by term: Brainstem glioma ClinVar PMID:20946881 PMID:21250968 PMID:21596855 PMID:21997850 PMID:22160010 More... NCBI chr15:90,083,045...90,102,468
Ensembl chr15:90,083,045...90,102,477
JBrowse link
G IFNG interferon gamma ISO RGD PMID:10078962 RGD:727266 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IGF1 insulin like growth factor 1 severity IEP protein:increased expression:serum: RGD PMID:21788435 RGD:8548833 NCBI chr12:102,395,860...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G IGF1R insulin like growth factor 1 receptor IAGP DNA: SNP: : rs2272037 or rs2016347 RGD PMID:18562769 RGD:5686434 NCBI chr15:98,648,539...98,964,530
Ensembl chr15:98,648,539...98,964,530
JBrowse link
G IGFBP3 insulin like growth factor binding protein 3 severity IEP protein:increased expression:serum: RGD PMID:21788435 RGD:8548833 NCBI chr 7:45,912,245...45,921,272
Ensembl chr 7:45,912,245...45,921,874
JBrowse link
G IL10 interleukin 10 susceptibility IAGP DNA:SNP: :rs1800896 (human) RGD PMID:20406895 RGD:4140470 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G IL12A interleukin 12A EXP CTD Direct Evidence: therapeutic CTD PMID:18176109 NCBI chr 3:159,988,835...159,996,019
Ensembl chr 3:159,988,835...159,996,019
JBrowse link
G IL12B interleukin 12B EXP CTD Direct Evidence: therapeutic CTD PMID:18176109 NCBI chr 5:159,314,780...159,330,487
Ensembl chr 5:159,314,780...159,330,487
JBrowse link
G IL18 interleukin 18 treatment ISO RGD PMID:18725309 RGD:8657054 NCBI chr11:112,143,251...112,164,104
Ensembl chr11:112,143,253...112,164,096
JBrowse link
G IL2 interleukin 2 treatment IDA RGD PMID:12864971 RGD:8663439 NCBI chr 4:122,451,470...122,456,725
Ensembl chr 4:122,451,470...122,456,725
JBrowse link
G IL4 interleukin 4 treatment ISO RGD PMID:9973213 RGD:8142389 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678
JBrowse link
G IL7 interleukin 7 ISO RGD PMID:10078962 RGD:727266 NCBI chr 8:78,675,870...78,806,830
Ensembl chr 8:78,675,743...78,805,523
JBrowse link
G KAT6B lysine acetyltransferase 6B IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr10:74,824,927...75,032,624
Ensembl chr10:74,824,927...75,032,624
JBrowse link
G KCNK4 potassium two pore domain channel subfamily K member 4 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,291,302...64,300,031
Ensembl chr11:64,291,302...64,300,031
JBrowse link
G KCNK7 potassium two pore domain channel subfamily K member 7 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,592,836...65,595,800
Ensembl chr11:65,592,836...65,595,996
JBrowse link
G KDM5B lysine demethylase 5B disease_progression IEP
IMP
RGD PMID:25450384 PMID:25450384 RGD:13702126, RGD:13702126 NCBI chr 1:202,724,495...202,809,470
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G KDR kinase insert domain receptor disease_progression
severity
ISO
IEP
RGD PMID:20501615 PMID:10506722 RGD:5684393, RGD:5684425 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G KLHL21 kelch like family member 21 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 1:6,590,724...6,602,869
Ensembl chr 1:6,590,724...6,614,607
JBrowse link
G KMT2D lysine methyltransferase 2D IAGP ClinVar Annotator: match by term: Astrocytoma ClinVar PMID:25741868 NCBI chr12:49,018,975...49,060,884
Ensembl chr12:49,018,978...49,060,794
JBrowse link
G KRAS KRAS proto-oncogene, GTPase severity IEP
ISO
RGD PMID:22207524 PMID:19435821 RGD:13702477, RGD:13702860 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G KREMEN2 kringle containing transmembrane protein 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr16:2,964,275...2,968,380
Ensembl chr16:2,964,216...2,968,383
JBrowse link
G LATS1 large tumor suppressor kinase 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 6:149,658,153...149,718,101
Ensembl chr 6:149,658,153...149,718,105
JBrowse link
G LETM1 leucine zipper and EF-hand containing transmembrane protein 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 4:1,811,479...1,856,156
Ensembl chr 4:1,811,479...1,856,156
JBrowse link
G LGALS3 galectin 3 disease_progression ISO RGD PMID:23179497 RGD:9685225 NCBI chr14:55,129,252...55,145,430
Ensembl chr14:55,124,110...55,145,423
JBrowse link
G LIG4 DNA ligase 4 IAGP DNA:SNP: :rs1805388 (human) RGD PMID:23663450 RGD:13204718 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368
JBrowse link
G LTA lymphotoxin alpha treatment IDA RGD PMID:1883913 RGD:1625042 NCBI chr 6:31,560,550...31,574,324
Ensembl chr 6:31,572,054...31,574,324
JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,538,559...65,558,389
Ensembl chr11:65,538,559...65,558,930
JBrowse link
G MACROD1 mono-ADP ribosylhydrolase 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:63,998,554...64,166,652
Ensembl chr11:63,998,558...64,166,113
JBrowse link
G MAJIN membrane anchored junction protein IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,938,230...64,972,108
Ensembl chr11:64,937,517...64,972,108
JBrowse link
G MALAT1 metastasis associated lung adenocarcinoma transcript 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,497,738...65,506,516
Ensembl chr11:65,497,688...65,506,516
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 IMP RGD PMID:21057530 RGD:13702863 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,837...66,491,544
JBrowse link
G MAP3K11 mitogen-activated protein kinase kinase kinase 11 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,597,755...65,614,221
Ensembl chr11:65,597,756...65,615,382
JBrowse link
G MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,784,918...64,803,248
Ensembl chr11:64,784,918...64,803,241
JBrowse link
G MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 2:39,248,941...39,437,312
Ensembl chr 2:39,249,266...39,437,301
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 ISO RGD PMID:27256374 RGD:13702865 NCBI chr16:30,114,105...30,123,309
Ensembl chr16:30,114,105...30,123,506
JBrowse link
G MARK2 microtubule affinity regulating kinase 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:63,838,955...63,911,020
Ensembl chr11:63,838,928...63,911,020
JBrowse link
G MDK midkine EXP CTD Direct Evidence: marker/mechanism CTD PMID:21233844 NCBI chr11:46,380,784...46,383,837
Ensembl chr11:46,380,756...46,383,837
JBrowse link
G MEN1 menin 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,803,514...64,811,294
Ensembl chr11:64,803,510...64,811,294
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO protein:increased expression:brain, glioma (rat) RGD PMID:18194445 RGD:2317467 NCBI chr 7:116,672,196...116,798,386
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase EXP CTD Direct Evidence: marker/mechanism CTD PMID:16033832 PMID:16899598 PMID:19901110 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983
JBrowse link
G MIR192 microRNA 192 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,891,137...64,891,246
Ensembl chr11:64,891,137...64,891,246
JBrowse link
G MIR194-2 microRNA 194-2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,891,355...64,891,439
Ensembl chr11:64,891,355...64,891,439
JBrowse link
G MIR215 microRNA 215 disease_progression IEP RGD PMID:28573541 RGD:13782061 NCBI chr 1:220,117,853...220,117,962
Ensembl chr 1:220,117,853...220,117,962
JBrowse link
G MKI67 marker of proliferation Ki-67 ISO RGD PMID:22262719 RGD:6483547 NCBI chr10:128,096,659...128,126,423
Ensembl chr10:128,096,659...128,126,423
JBrowse link
G MMP2 matrix metallopeptidase 2 treatment ISO RGD PMID:19292920 RGD:8657080 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691
JBrowse link
G MRPL49 mitochondrial ribosomal protein L49 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,122,183...65,127,371
Ensembl chr11:65,122,183...65,127,371
JBrowse link
G MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr MT:10,760...12,137
Ensembl chr MT:10,760...12,137
JBrowse link
G MTOR mechanistic target of rapamycin kinase severity IEP RGD PMID:20878445 RGD:13702868 NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G MYB MYB proto-oncogene, transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:23583981 PMID:26829751 NCBI chr 6:135,181,308...135,219,172
Ensembl chr 6:135,181,308...135,219,173
JBrowse link
G MYBL1 MYB proto-oncogene like 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23583981 NCBI chr 8:66,562,175...66,613,218
Ensembl chr 8:66,562,175...66,614,247
JBrowse link
G MYLK myosin light chain kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:10232591 NCBI chr 3:123,610,049...123,884,332
Ensembl chr 3:123,610,049...123,884,332
JBrowse link
G NAA40 N-alpha-acetyltransferase 40, NatD catalytic subunit IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:63,938,973...63,957,322
Ensembl chr11:63,938,959...63,957,319
JBrowse link
G NAALADL1 N-acetylated alpha-linked acidic dipeptidase like 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,044,818...65,059,020
Ensembl chr11:65,044,818...65,058,553
JBrowse link
G NADSYN1 NAD synthetase 1 susceptibility IAGP RGD PMID:22740028 RGD:13703114 NCBI chr11:71,453,203...71,501,816
Ensembl chr11:71,453,109...71,524,107
JBrowse link
G NDRG4 NDRG family member 4 disease_progression IEP protein:decreased expression:brain RGD PMID:22399192 RGD:7247727 NCBI chr16:58,463,704...58,515,403
Ensembl chr16:58,462,846...58,513,628
JBrowse link
G NEAT1 nuclear paraspeckle assembly transcript 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,422,798...65,445,540
Ensembl chr11:65,422,774...65,445,540
JBrowse link
G NET1 neuroepithelial cell transforming 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr10:5,412,557...5,459,056
Ensembl chr10:5,412,557...5,459,056
JBrowse link
G NF1 neurofibromin 1 disease_progression IAGP
EXP
DNA:mutations: :
CTD Direct Evidence: marker/mechanism
CTD PMID:25119042 PMID:26190195 RGD:12789702 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116
JBrowse link
G NF2 neurofibromin 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr22:29,603,556...29,698,600
Ensembl chr22:29,603,556...29,698,598
JBrowse link
G NOS3 nitric oxide synthase 3 IEP protein:increased expression:blood vessel endothelial cell RGD PMID:14672505 RGD:2292080 NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588
JBrowse link
G NRXN2 neurexin 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,606,174...64,723,197
Ensembl chr11:64,606,174...64,723,197
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24705251 NCBI chr 1:156,815,750...156,881,850
Ensembl chr 1:156,815,640...156,881,850
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24705251 NCBI chr 9:84,668,458...85,027,070
Ensembl chr 9:84,668,551...85,027,054
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24705251 NCBI chr15:87,859,749...88,256,796
Ensembl chr15:87,859,751...88,256,768
JBrowse link
G NUDT22 nudix hydrolase 22 IAGP ClinVar Annotator: match by term: Brainstem glioma ClinVar NCBI chr11:64,226,258...64,230,016
Ensembl chr11:64,225,941...64,230,686
JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:63,986,438...63,998,412
Ensembl chr11:63,985,853...64,001,811
JBrowse link
G OTUD5 OTU deubiquitinase 5 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr  X:48,922,024...48,960,783
Ensembl chr  X:48,922,024...48,958,386
JBrowse link
G PATZ1 POZ/BTB and AT hook containing zinc finger 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr22:31,325,804...31,346,346
Ensembl chr22:31,325,804...31,346,346
JBrowse link
G PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO mRNA:decreased expression:brain: RGD PMID:15857672 RGD:10448283 NCBI chr 6:149,749,695...149,811,421
Ensembl chr 6:149,749,443...149,811,420
JBrowse link
G PCNX3 pecanex 3 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,614,311...65,637,439
Ensembl chr11:65,615,776...65,637,439
JBrowse link
G PDAP1 PDGFA associated protein 1 severity IEP RGD PMID:27448842 RGD:13702895 NCBI chr 7:99,394,673...99,408,597
Ensembl chr 7:99,392,048...99,408,597
JBrowse link
G PDGFA platelet derived growth factor subunit A IMP in a mouse model RGD PMID:21490965 RGD:13702894 NCBI chr 7:497,245...520,668
Ensembl chr 7:497,258...520,296
JBrowse link
G PDGFB platelet derived growth factor subunit B severity IEP
IMP
RGD PMID:27448842 PMID:21677873 PMID:26945107 RGD:13702895, RGD:13702897, RGD:13702896 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19578367 NCBI chr11:118,606,296...118,658,028
Ensembl chr11:118,606,440...118,658,031
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha TAS
IAGP
ClinVar Annotator: match by term: Brainstem glioma
ClinVar Annotator: match by term: Rosette-forming glioneuronal tumor
ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... RGD:2290476 NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PIK3R3 phosphoinositide-3-kinase regulatory subunit 3 treatment IEP RGD PMID:28260020 RGD:13782053 NCBI chr 1:46,040,140...46,174,901
Ensembl chr 1:46,040,140...46,133,036
JBrowse link
G PLAU plasminogen activator, urokinase severity IEP protein:increased expression:brain (human) RGD PMID:7604873 RGD:7241260 NCBI chr10:73,909,182...73,917,497
Ensembl chr10:73,909,177...73,917,496
JBrowse link
G PLCB3 phospholipase C beta 3 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,251,530...64,269,452
Ensembl chr11:64,251,530...64,269,150
JBrowse link
G PLK1 polo like kinase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22000864 NCBI chr16:23,678,889...23,690,367
Ensembl chr16:23,677,656...23,690,367
JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,261,917...65,306,269
Ensembl chr11:65,261,920...65,305,589
JBrowse link
G POT1 protection of telomeres 1 susceptibility IAGP
EXP
ClinVar Annotator: match by term: Glioma susceptibility 9
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:24686846 PMID:25482530 PMID:27329137 PMID:28393830 PMID:28393832 More... NCBI chr 7:124,822,386...124,929,825
Ensembl chr 7:124,822,386...124,929,983
JBrowse link
G POU3F4 POU class 3 homeobox 4 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr  X:83,508,290...83,512,127
Ensembl chr  X:83,508,290...83,512,127
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma IAGP ClinVar Annotator: match by term: Glioma susceptibility 1 ClinVar PMID:9467001 PMID:10523018 PMID:10851250 PMID:14671186 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D EXP CTD Direct Evidence: marker/mechanism CTD PMID:24880341 NCBI chr17:60,600,187...60,666,280
Ensembl chr17:60,600,183...60,666,280
JBrowse link
G PPP1R14B protein phosphatase 1 regulatory inhibitor subunit 14B IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,244,479...64,246,943
Ensembl chr11:64,244,479...64,246,943
JBrowse link
G PPP2R5B protein phosphatase 2 regulatory subunit B'beta IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,917,553...64,934,478
Ensembl chr11:64,917,553...64,934,475
JBrowse link
G PRDX5 peroxiredoxin 5 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,318,121...64,321,811
Ensembl chr11:64,318,121...64,321,811
JBrowse link
G PRKCA protein kinase C alpha IAGP DNA:gene fusion: : RGD PMID:26671581 RGD:11087038 NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743
JBrowse link
G PSD3 pleckstrin and Sec7 domain containing 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16865689 NCBI chr 8:18,527,303...19,086,909
Ensembl chr 8:18,527,303...19,084,730
JBrowse link
G PTEN phosphatase and tensin homolog susceptibility IAGP
EXP
DNA:deletions, missense mutations, nonsense mutation:exons:multiple (human)
ClinVar Annotator: match by term: Glioma susceptibility 2
CTD Direct Evidence: marker/mechanism
ClinVar
OMIM
CTD
PMID:9259288 PMID:9399897 PMID:9467011 PMID:9856571 PMID:10232405 More... RGD:12801495 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,863,625...87,971,930
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:15561105 NCBI chr 1:186,671,791...186,680,423
Ensembl chr 1:186,671,791...186,680,922
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 IAGP ClinVar Annotator: match by term: Astrocytoma ClinVar PMID:11704759 PMID:12634870 PMID:12717436 PMID:14644997 PMID:14974085 More... NCBI chr12:112,418,915...112,509,918
Ensembl chr12:112,418,351...112,509,918
JBrowse link
G PYGM glycogen phosphorylase, muscle associated IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,746,389...64,760,715
Ensembl chr11:64,746,389...64,759,974
JBrowse link
G QKI QKI, KH domain containing RNA binding EXP CTD Direct Evidence: marker/mechanism CTD PMID:26829751 NCBI chr 6:163,414,486...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:23583981 NCBI chr 3:12,583,601...12,664,117
Ensembl chr 3:12,583,601...12,664,125
JBrowse link
G RASGRP2 RAS guanyl releasing protein 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,726,911...64,745,481
Ensembl chr11:64,726,911...64,745,456
JBrowse link
G RASSF1 Ras association domain family member 1 TAS RGD PMID:17325427 RGD:2291979 NCBI chr 3:50,329,786...50,340,836
Ensembl chr 3:50,329,782...50,340,980
JBrowse link
G RCOR2 REST corepressor 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:63,911,230...63,917,164
Ensembl chr11:63,911,230...63,917,164
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,653,601...65,662,946
Ensembl chr11:65,653,597...65,663,090
JBrowse link
G RET ret proto-oncogene IAGP ClinVar Annotator: match by term: Ependymoma ClinVar PMID:25741868 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351
JBrowse link
G RNF216 ring finger protein 216 IAGP ClinVar Annotator: match by term: Rosette-forming glioneuronal tumor ClinVar PMID:26822237 PMID:27626068 NCBI chr 7:5,620,047...5,781,721
Ensembl chr 7:5,620,047...5,781,696
JBrowse link
G ROS1 ROS proto-oncogene 1, receptor tyrosine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:19276365 NCBI chr 6:117,287,353...117,426,065
Ensembl chr 6:117,287,353...117,425,942
JBrowse link
G RPS6KA4 ribosomal protein S6 kinase A4 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,359,162...64,372,215
Ensembl chr11:64,359,148...64,372,215
JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19578366 PMID:19578367 NCBI chr20:63,657,810...63,696,253
Ensembl chr20:63,657,810...63,696,253
JBrowse link
G SAC3D1 SAC3 domain containing 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,040,933...65,044,828
Ensembl chr11:65,040,901...65,044,828
JBrowse link
G SCYL1 SCY1 like pseudokinase 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,525,081...65,538,710
Ensembl chr11:65,525,077...65,538,704
JBrowse link
G SERPINE1 serpin family E member 1 IEP protein:increased expression:plasma RGD PMID:14977830 RGD:13208546 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SETD9 SET domain containing 9 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 5:56,909,260...56,928,900
Ensembl chr 5:56,909,260...56,925,532
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 severity IEP protein:increased expression:brain, cell nucleus (human) RGD PMID:23943221 RGD:9590166 NCBI chr 1:150,926,263...150,964,737
Ensembl chr 1:150,926,263...150,964,744
JBrowse link
G SF1 splicing factor 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,764,606...64,778,769
Ensembl chr11:64,764,606...64,778,786
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 disease_progression
severity
IDA
ISO
IEP
protein:increased expression:cytoplasm,white matter: RGD PMID:23050879 PMID:23050879 PMID:23050879 RGD:13463483, RGD:13463483, RGD:13463483 NCBI chr19:4,360,369...4,400,547
Ensembl chr19:4,360,370...4,400,547
JBrowse link
G SH3TC2 SH3 domain and tetratricopeptide repeats 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 5:148,982,150...149,063,062
Ensembl chr 5:148,923,639...149,063,163
JBrowse link
G SIPA1 signal-induced proliferation-associated 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,638,101...65,650,930
Ensembl chr11:65,638,101...65,650,918
JBrowse link
G SIRT2 sirtuin 2 treatment ISO RGD PMID:23522375 RGD:9586035 NCBI chr19:38,878,555...38,899,733
Ensembl chr19:38,878,555...38,899,862
JBrowse link
G SLC22A11 solute carrier family 22 member 11 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,555,847...64,572,875
Ensembl chr11:64,555,690...64,572,875
JBrowse link
G SLC22A12 solute carrier family 22 member 12 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,591,219...64,603,250
Ensembl chr11:64,590,641...64,602,353
JBrowse link
G SLC25A45 solute carrier family 25 member 45 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,375,192...65,383,701
Ensembl chr11:65,375,192...65,383,701
JBrowse link
G SLC39A11 solute carrier family 39 member 11 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr17:72,645,949...73,092,714
Ensembl chr17:72,645,949...73,092,712
JBrowse link
G SLC44A1 solute carrier family 44 member 1 IAGP DNA:gene fusion: : RGD PMID:26671581 RGD:11087038 NCBI chr 9:105,244,608...105,439,775
Ensembl chr 9:105,244,622...105,439,171
JBrowse link
G SLC5A5 solute carrier family 5 member 5 EXP CTD Direct Evidence: therapeutic CTD PMID:12489024 NCBI chr19:17,871,394...17,895,175
Ensembl chr19:17,871,945...17,895,174
JBrowse link
G SLC6A3 solute carrier family 6 member 3 ISO protein:decreased expression RGD PMID:14698456 RGD:1625668 NCBI chr 5:1,392,794...1,445,440
Ensembl chr 5:1,392,794...1,445,440
JBrowse link
G SNX15 sorting nexin 15 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,027,439...65,040,572
Ensembl chr11:65,027,439...65,040,572
JBrowse link
G SOD1 superoxide dismutase 1 EXP CTD Direct Evidence: therapeutic CTD PMID:11861405 NCBI chr21:31,659,693...31,668,931
Ensembl chr21:31,659,666...31,668,931
JBrowse link
G SOX6 SRY-box transcription factor 6 IDA RGD PMID:15696967 RGD:1580007 NCBI chr11:15,966,449...16,738,477
Ensembl chr11:15,966,449...16,739,591
JBrowse link
G SPDYC speedy/RINGO cell cycle regulator family member C IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,170,154...65,173,666
Ensembl chr11:65,170,154...65,173,244
JBrowse link
G SPHK1 sphingosine kinase 1 ISO protein:increased expression:endothelial cell (rat) RGD PMID:17316399 RGD:2311379 NCBI chr17:76,383,204...76,387,855
Ensembl chr17:76,376,584...76,387,860
JBrowse link
G SPINDOC spindlin interactor and repressor of chromatin binding IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:63,813,374...63,827,718
Ensembl chr11:63,813,456...63,827,716
JBrowse link
G SPP1 secreted phosphoprotein 1 ISO
EXP
CTD Direct Evidence: marker/mechanism CTD PMID:16651633 PMID:16651633 RGD:1581321 NCBI chr 4:87,975,714...87,983,411
Ensembl chr 4:87,975,667...87,983,532
JBrowse link
G SPRY3 sprouty RTK signaling antagonist 3 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr  X:155,612,586...155,782,459
NCBI chr  Y:56,923,423...56,968,979
Ensembl chr  X:155,612,572...155,782,459
JBrowse link
G ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 treatment ISO RGD PMID:11559557 RGD:10043143 NCBI chr 3:186,930,526...187,078,553
Ensembl chr 3:186,930,325...187,078,553
JBrowse link
G STIP1 stress induced phosphoprotein 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,185,272...64,204,543
Ensembl chr11:64,185,272...64,204,543
JBrowse link
G STMN1 stathmin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17440165 NCBI chr 1:25,884,179...25,906,880
Ensembl chr 1:25,884,181...25,906,991
JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr  X:48,695,554...48,709,016
Ensembl chr  X:48,695,554...48,709,016
JBrowse link
G SUZ12 SUZ12 polycomb repressive complex 2 subunit EXP CTD Direct Evidence: marker/mechanism CTD PMID:25119042 NCBI chr17:31,937,007...32,001,040
Ensembl chr17:31,937,007...32,001,038
JBrowse link
G SYNE1 spectrin repeat containing nuclear envelope protein 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 6:152,121,687...152,637,395
Ensembl chr 6:152,121,687...152,637,801
JBrowse link
G SYVN1 synoviolin 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,127,279...65,135,178
Ensembl chr11:65,121,780...65,134,532
JBrowse link
G TASOR transcription activation suppressor IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr 3:56,620,132...56,683,265
Ensembl chr 3:56,620,132...56,683,265
JBrowse link
G TERT telomerase reverse transcriptase EXP CTD Direct Evidence: marker/mechanism CTD PMID:18021753 PMID:19578367 NCBI chr 5:1,253,167...1,295,068
Ensembl chr 5:1,253,147...1,295,068
JBrowse link
G TFRC transferrin receptor EXP CTD Direct Evidence: marker/mechanism CTD PMID:16904380 NCBI chr 3:196,018,694...196,082,123
Ensembl chr 3:196,027,183...196,082,096
JBrowse link
G TIGD3 tigger transposable element derived 3 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,354,751...65,357,613
Ensembl chr11:65,354,751...65,357,613
JBrowse link
G TM7SF2 transmembrane 7 superfamily member 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,111,872...65,116,230
Ensembl chr11:65,111,845...65,116,384
JBrowse link
G TNC tenascin C ISO protein:increased expression:brain RGD PMID:16928692 RGD:4889612 NCBI chr 9:115,019,575...115,118,244
Ensembl chr 9:115,019,575...115,118,257
JBrowse link
G TNF tumor necrosis factor treatment IMP
EXP
CTD Direct Evidence: marker/mechanism CTD PMID:22199285 PMID:11810046 RGD:10450725 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNFSF10 TNF superfamily member 10 EXP CTD Direct Evidence: therapeutic CTD PMID:16820965 PMID:19229339 NCBI chr 3:172,505,508...172,523,430
Ensembl chr 3:172,505,508...172,523,475
JBrowse link
G TOP2A DNA topoisomerase II alpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:18402387 NCBI chr17:40,388,525...40,417,902
Ensembl chr17:40,388,525...40,417,896
JBrowse link
G TP53 tumor protein p53 susceptibility IMP
IAGP
EXP
ISO
ClinVar Annotator: match by term: Glioma susceptibility 1
ClinVar Annotator: match by term: Brainstem glioma
ClinVar Annotator: match by term: Astrocytoma
CTD Direct Evidence: marker/mechanism
ClinVar
OMIM
CTD
PMID:1359493 PMID:1467311 PMID:1565143 PMID:1565144 PMID:1581912 More... RGD:2290571 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TRAF3 TNF receptor associated factor 3 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr14:102,777,449...102,911,500
Ensembl chr14:102,777,449...102,911,500
JBrowse link
G TRIM29 tripartite motif containing 29 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30929997 NCBI chr11:120,111,286...120,138,113
Ensembl chr11:120,111,286...120,185,529
JBrowse link
G TRMT112 tRNA methyltransferase activator subunit 11-2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,316,460...64,318,596
Ensembl chr11:64,316,460...64,317,559
JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr15:31,001,065...31,161,160
Ensembl chr15:31,001,061...31,161,273
JBrowse link
G TRPT1 tRNA phosphotransferase 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,223,799...64,226,224
Ensembl chr11:64,223,799...64,226,254
JBrowse link
G TSC1 TSC complex subunit 1 IAGP ClinVar Annotator: match by term: Astrocytoma ClinVar PMID:25741868 NCBI chr 9:132,891,349...132,945,269
Ensembl chr 9:132,891,348...132,946,874
JBrowse link
G TXNRD2 thioredoxin reductase 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr22:19,875,522...19,941,818
Ensembl chr22:19,875,517...19,941,820
JBrowse link
G VBP1 VHL binding protein 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr  X:155,197,007...155,239,841
Ensembl chr  X:155,197,007...155,239,841
JBrowse link
G VEGFB vascular endothelial growth factor B IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:64,234,584...64,239,264
Ensembl chr11:64,234,584...64,239,264
JBrowse link
G VPS51 VPS51 subunit of GARP complex IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,096,214...65,111,862
Ensembl chr11:65,089,324...65,111,862
JBrowse link
G XAF1 XIAP associated factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:28122345 NCBI chr17:6,755,408...6,775,647
Ensembl chr17:6,755,447...6,775,647
JBrowse link
G XBP1 X-box binding protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21138464 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597
JBrowse link
G XRCC1 X-ray repair cross complementing 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25227852 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473
JBrowse link
G YEATS4 YEATS domain containing 4 ISO RGD PMID:11521196 RGD:1598696 NCBI chr12:69,359,705...69,427,077
Ensembl chr12:69,359,710...69,390,870
JBrowse link
G ZFPL1 zinc finger protein like 1 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,084,222...65,088,398
Ensembl chr11:65,084,210...65,088,398
JBrowse link
G ZFTA zinc finger translocation associated IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:63,759,892...63,768,775
Ensembl chr11:63,759,892...63,768,775
JBrowse link
G ZNHIT2 zinc finger HIT-type containing 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,116,403...65,117,701
Ensembl chr11:65,116,403...65,117,701
JBrowse link
G ZNRD2 zinc ribbon domain containing 2 IAGP ClinVar Annotator: match by term: Ependymoma ClinVar NCBI chr11:65,570,477...65,571,888
Ensembl chr11:65,570,460...65,573,942
JBrowse link
Adult Cerebral Astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP1 matrix metallopeptidase 1 susceptibility IAGP DNA:insertion:promoter:g.-1607insG (human) RGD PMID:17502998 RGD:7207034 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160
JBrowse link
adult pineal parenchymal tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MKI67 marker of proliferation Ki-67 severity IEP RGD PMID:21696422 RGD:6483520 NCBI chr10:128,096,659...128,126,423
Ensembl chr10:128,096,659...128,126,423
JBrowse link
adult spinal cord ependymoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD6 chromodomain helicase DNA binding protein 6 IAGP ClinVar Annotator: match by term: Adult Spinal Cord Ependymoma ClinVar NCBI chr20:41,402,083...41,618,377
Ensembl chr20:41,402,083...41,618,384
JBrowse link
anaplastic astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler IAGP ClinVar Annotator: match by term: Astrocytoma, anaplastic ClinVar PMID:7697714 PMID:8968741 PMID:18414213 PMID:22995991 PMID:24082139 More... NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IEP mRNA:decreased expression:brain RGD PMID:19179066 RGD:13702872 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G TP53 tumor protein p53 IAGP ClinVar Annotator: match by term: Astrocytoma, anaplastic ClinVar PMID:1349175 PMID:1565143 PMID:1565144 PMID:1591732 PMID:7565304 More... NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
anaplastic ependymoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PALB2 partner and localizer of BRCA2 IAGP ClinVar Annotator: match by term: Anaplastic ependymoma ClinVar PMID:21285249 PMID:25741868 PMID:26315354 PMID:26467025 PMID:26580448 More... NCBI chr16:23,603,162...23,641,337
Ensembl chr16:23,603,160...23,641,310
JBrowse link
G RNF213 ring finger protein 213 IAGP ClinVar Annotator: match by term: Anaplastic ependymoma ClinVar PMID:26822237 NCBI chr17:80,260,820...80,398,794
Ensembl chr17:80,260,866...80,398,786
JBrowse link
G RNF213-AS1 RNF213 antisense RNA 1 IAGP ClinVar Annotator: match by term: Anaplastic ependymoma ClinVar PMID:26822237 NCBI chr17:80,351,830...80,415,168
Ensembl chr17:80,351,828...80,415,168
JBrowse link
G RUNX1 RUNX family transcription factor 1 IAGP ClinVar Annotator: match by term: Anaplastic ependymoma ClinVar PMID:25741868 PMID:28492532 NCBI chr21:34,787,801...35,049,334
Ensembl chr21:34,787,801...36,004,667
JBrowse link
anaplastic oligodendroglioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIC capicua transcriptional repressor IAGP ClinVar Annotator: match by term: Oligodendroglioma, anaplastic ClinVar NCBI chr19:42,268,530...42,295,796
Ensembl chr19:42,268,537...42,295,797
JBrowse link
astroblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR542 microRNA 542 disease_progression IEP RGD PMID:26286747 RGD:13782052 NCBI chr  X:134,541,341...134,541,437
Ensembl chr  X:134,541,341...134,541,437
JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 severity IMP
IEP
RGD PMID:26956052 PMID:26286747 RGD:11343921, RGD:13782052 NCBI chr 5:68,215,737...68,301,821
Ensembl chr 5:68,215,756...68,301,821
JBrowse link
brain glioblastoma multiforme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR139 microRNA 139 IEP RNA:decreased expression:brain: RGD PMID:26449464 RGD:13838722 NCBI chr11:72,615,063...72,615,130
Ensembl chr11:72,615,063...72,615,130
JBrowse link
G NCAM1 neural cell adhesion molecule 1 disease_progression IEP RGD PMID:20219118 RGD:40924672 NCBI chr11:112,961,420...113,278,436
Ensembl chr11:112,961,247...113,278,436
JBrowse link
brain glioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM3A ADAM metallopeptidase domain 3A (pseudogene) IAGP DNA:deletion RGD PMID:21138945 RGD:13831351 NCBI chr 8:39,451,045...39,522,989
Ensembl chr 8:39,451,045...39,522,852
JBrowse link
G BAX BCL2 associated X, apoptosis regulator treatment ISO RGD PMID:27255231 PMID:29324390 RGD:13792502, RGD:13792598 NCBI chr19:48,954,825...48,961,798
Ensembl chr19:48,954,815...48,961,798
JBrowse link
G BCL2 BCL2 apoptosis regulator treatment ISO RGD PMID:27255231 PMID:29324390 RGD:13792502, RGD:13792598 NCBI chr18:63,123,346...63,320,280
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G BST2 bone marrow stromal cell antigen 2 ISO mRNA,protein:increased expression:brain: RGD PMID:21565182 RGD:14398497 NCBI chr19:17,402,939...17,405,630
Ensembl chr19:17,402,939...17,405,630
JBrowse link
G CASP3 caspase 3 treatment ISO RGD PMID:29324390 RGD:13792598 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,649,509
JBrowse link
G FADD Fas associated via death domain treatment ISO RGD PMID:27255231 RGD:13792502 NCBI chr11:70,203,296...70,207,390
Ensembl chr11:70,203,296...70,207,390
JBrowse link
G FAS Fas cell surface death receptor treatment ISO RGD PMID:29324390 RGD:13792598 NCBI chr10:88,968,429...89,017,059
Ensembl chr10:88,990,531...89,017,059
JBrowse link
G FASLG Fas ligand treatment ISO RGD PMID:29324390 RGD:13792598 NCBI chr 1:172,659,103...172,666,876
Ensembl chr 1:172,659,103...172,666,876
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO RGD PMID:26032618 RGD:13792685 NCBI chr12:6,534,517...6,538,371
Ensembl chr12:6,534,512...6,538,374
JBrowse link
brain stem glioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX3 paired box 3 ISO mRNA,protein:increased expression:brain stem: RGD PMID:25330836 RGD:13702891 NCBI chr 2:222,199,887...222,298,998
Ensembl chr 2:222,199,887...222,298,998
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha severity IEP RGD PMID:20197468 RGD:13702892 NCBI chr 4:54,229,127...54,298,245
Ensembl chr 4:54,229,280...54,298,245
JBrowse link
cerebellar medulloblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSH6 mutS homolog 6 IAGP ClinVar Annotator: match by term: Cerebellar medulloblastoma ClinVar NCBI chr 2:47,783,145...47,806,954
Ensembl chr 2:47,695,530...47,810,063
JBrowse link
childhood pilocytic astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAPK1 mitogen-activated protein kinase 1 IEP protein:increased expression:brain: RGD PMID:21466243 RGD:13702864 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680
JBrowse link
chromosome 13q14 deletion syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638
JBrowse link
G AL139082.1 novel transcript, antisense to NEK3 & NEK5 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,128,895...52,132,723
Ensembl chr13:52,128,891...52,132,723
JBrowse link
G AL355390.1 novel transcript IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,412,957...74,419,115
Ensembl chr13:74,412,957...74,419,115
JBrowse link
G AL445209.1 novel transcript, antisense to POU4F1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,596,122...78,599,619
Ensembl chr13:78,596,129...78,599,619
JBrowse link
G AL445238.1 keratin-associated protein 21-1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,832,361...63,833,053
Ensembl chr13:63,832,361...63,833,531
JBrowse link
G AL445989.1 keratin-associated protein 21-1-like IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,746,102...63,747,788
Ensembl chr13:63,746,741...63,751,080
JBrowse link
G AL450447.1 putative UPF0607 protein ENSP00000383144 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,661,374...77,662,803
Ensembl chr13:77,661,376...77,662,626
JBrowse link
G ALG11 ALG11 alpha-1,2-mannosyltransferase IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,012,398...52,033,600
Ensembl chr13:52,012,391...52,079,232
JBrowse link
G ARL11 ADP ribosylation factor like GTPase 11 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,628,456...49,633,872
Ensembl chr13:49,628,507...49,633,872
JBrowse link
G ATP7B ATPase copper transporting beta IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,932,669...52,012,130
Ensembl chr13:51,930,436...52,012,125
JBrowse link
G ATXN8OS ATXN8 opposite strand lncRNA IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,107,213...70,139,753
Ensembl chr13:70,107,213...70,171,738
JBrowse link
G BORA BORA aurora kinase A activator IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,727,923...72,756,196
Ensembl chr13:72,727,749...72,756,198
JBrowse link
G C13orf42 chromosome 13 open reading frame 42 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,082,119...51,172,388
Ensembl chr13:51,082,119...51,200,252
JBrowse link
G CAB39L calcium binding protein 39 like IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,308,650...49,444,851
Ensembl chr13:49,308,650...49,444,064
JBrowse link
G CCDC70 coiled-coil domain containing 70 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,861,969...51,866,232
Ensembl chr13:51,861,969...51,866,232
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,247,875...49,293,486
Ensembl chr13:49,247,925...49,293,485
JBrowse link
G CKAP2 cytoskeleton associated protein 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,455,429...52,476,627
Ensembl chr13:52,455,429...52,476,628
JBrowse link
G CLN5 CLN5 intracellular trafficking protein IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:76,992,081...77,005,117
Ensembl chr13:76,990,660...77,019,143
JBrowse link
G CNMD chondromodulin IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,703,264...52,739,820
Ensembl chr13:52,703,264...52,739,820
JBrowse link
G COMMD6 COMM domain containing 6 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,525,214...75,549,439
Ensembl chr13:75,525,214...75,549,439
JBrowse link
G CYSLTR2 cysteinyl leukotriene receptor 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,653,929...48,711,226
Ensembl chr13:48,653,711...48,711,226
JBrowse link
G DACH1 dachshund family transcription factor 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,437,966...71,868,068
Ensembl chr13:71,437,966...71,867,204
JBrowse link
G DHRS12 dehydrogenase/reductase 12 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,767,993...51,804,163
Ensembl chr13:51,767,993...51,804,163
JBrowse link
G DIAPH3 diaphanous related formin 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:59,665,583...60,163,928
Ensembl chr13:59,665,583...60,163,928
JBrowse link
G DIAPH3-AS1 DIAPH3 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,012,718...60,044,357
Ensembl chr13:60,012,734...60,044,357
JBrowse link
G DIAPH3-AS2 DIAPH3 antisense RNA 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,144,698...60,153,505
Ensembl chr13:60,144,648...60,153,678
JBrowse link
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,752,169...72,781,900
Ensembl chr13:72,752,169...72,782,096
JBrowse link
G DLEU1 deleted in lymphocytic leukemia 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,082,169...50,528,643
Ensembl chr13:50,082,169...50,906,856
JBrowse link
G DLEU1-AS1 DLEU1 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,520,933...50,527,449
Ensembl chr13:50,519,364...50,843,939
JBrowse link
G DLEU2 deleted in lymphocytic leukemia 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,982,549...50,125,541
Ensembl chr13:49,956,670...50,125,720
JBrowse link
G DLEU7 deleted in lymphocytic leukemia 7 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,711,026...50,843,945
Ensembl chr13:50,519,364...50,843,939
JBrowse link
G DLEU7-AS1 DLEU7 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,807,855...50,849,905
Ensembl chr13:50,082,169...50,906,856
JBrowse link
G EBPL EBP like IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,660,674...49,691,487
Ensembl chr13:49,660,674...49,691,486
JBrowse link
G EDNRB endothelin receptor type B IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529
JBrowse link
G EDNRB-AS1 EDNRB antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,818,937...77,908,442
Ensembl chr13:77,779,723...77,844,145
JBrowse link
G FAM124A family with sequence similarity 124 member A IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,222,367...51,284,241
Ensembl chr13:51,222,334...51,284,239
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:76,992,597...77,027,164
Ensembl chr13:76,992,598...77,027,195
JBrowse link
G FNDC3A fibronectin type III domain containing 3A IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,975,241...49,209,779
Ensembl chr13:48,975,912...49,209,779
JBrowse link
G HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1 like 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,617,525...52,643,773
Ensembl chr13:52,642,431...52,643,773
JBrowse link
G INTS6 integrator complex subunit 6 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,353,171...51,453,333
Ensembl chr13:51,354,077...51,454,264
JBrowse link
G INTS6-AS1 INTS6 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,453,345...51,454,716
Ensembl chr13:51,452,364...51,554,678
JBrowse link
G ITM2B integral membrane protein 2B IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,233,206...48,270,357
Ensembl chr13:48,232,612...48,270,357
JBrowse link
G KCNRG potassium channel regulator IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,015,444...50,020,922
Ensembl chr13:50,015,254...50,020,922
JBrowse link
G KCTD12 potassium channel tetramerization domain containing 12 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:76,880,175...76,886,405
Ensembl chr13:76,880,175...76,886,405
JBrowse link
G KLF12 Kruppel like factor 12 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,686,089...74,168,295
Ensembl chr13:73,686,089...74,133,929
JBrowse link
G KLF5 Kruppel like factor 5 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,054,976...73,077,538
Ensembl chr13:73,054,976...73,077,541
JBrowse link
G KLHL1 kelch like family member 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:69,700,593...70,108,452
Ensembl chr13:69,700,594...70,108,493
JBrowse link
G KPNA3 karyopherin subunit alpha 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,699,307...49,792,682
Ensembl chr13:49,699,320...49,792,682
JBrowse link
G LINC00331 long intergenic non-protein coding RNA 331 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,787,319...78,840,050
Ensembl chr13:78,786,272...78,840,051
JBrowse link
G LINC00333 long intergenic non-protein coding RNA 333 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:84,140,602...84,606,768
Ensembl chr13:84,562,364...84,563,236
JBrowse link
G LINC00345 long intergenic non-protein coding RNA 345 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,483,687...52,601,006
Ensembl chr13:52,482,804...52,489,216
JBrowse link
G LINC00347 long intergenic non-protein coding RNA 347 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,552,843...74,557,120
Ensembl chr13:74,552,503...74,565,445
JBrowse link
G LINC00348 long intergenic non-protein coding RNA 348 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,015,141...71,168,417
Ensembl chr13:71,015,042...71,168,417
JBrowse link
G LINC00351 long intergenic non-protein coding RNA 351 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:85,363,603...85,544,662
Ensembl chr13:85,363,601...85,544,570
JBrowse link
G LINC00355 long intergenic non-protein coding RNA 355 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,986,371...64,076,011
Ensembl chr13:63,851,197...64,076,044
JBrowse link
G LINC00358 long intergenic non-protein coding RNA 358 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,003,525...62,029,548
Ensembl chr13:61,997,136...62,029,572
JBrowse link
G LINC00364 long intergenic non-protein coding RNA 364 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:67,372,387...67,379,994
Ensembl chr13:67,326,177...67,379,994
JBrowse link
G LINC00374 long intergenic non-protein coding RNA 374 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:58,211,697...58,233,117
Ensembl chr13:58,211,697...58,233,117
JBrowse link
G LINC00375 long intergenic non-protein coding RNA 375 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:85,065,087...85,148,057
Ensembl chr13:85,065,087...85,078,920
JBrowse link
G LINC00376 long intergenic non-protein coding RNA 376 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,183,101...63,328,094
Ensembl chr13:63,183,096...63,328,129
JBrowse link
G LINC00377 long intergenic non-protein coding RNA 377 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:81,018,391...81,044,442
Ensembl chr13:81,018,176...81,044,691
JBrowse link
G LINC00378 long intergenic non-protein coding RNA 378 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,672,955...60,695,806
Ensembl chr13:60,618,991...61,176,758
JBrowse link
G LINC00381 long intergenic non-protein coding RNA 381 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,419,173...74,435,159
Ensembl chr13:74,419,158...74,444,735
JBrowse link
G LINC00382 long intergenic non-protein coding RNA 382 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,872,586...79,918,036
Ensembl chr13:79,872,586...79,918,042
JBrowse link
G LINC00383 long intergenic non-protein coding RNA 383 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:69,222,346...69,322,101
Ensembl chr13:69,221,866...69,322,190
JBrowse link
G LINC00392 long intergenic non-protein coding RNA 392 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,564,244...73,587,879
Ensembl chr13:73,564,244...73,588,070
JBrowse link
G LINC00393 long intergenic non-protein coding RNA 393 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,546,687...73,670,457
Ensembl chr13:73,413,473...73,661,891
JBrowse link
G LINC00395 long intergenic non-protein coding RNA 395 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,667,682...63,738,018
Ensembl chr13:63,667,681...63,738,018
JBrowse link
G LINC00402 long intergenic non-protein coding RNA 402 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,231,444...74,259,976
Ensembl chr13:74,231,457...74,259,976
JBrowse link
G LINC00430 long intergenic non-protein coding RNA 430 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:86,909,601...86,936,807
Ensembl chr13:86,909,586...86,937,108
JBrowse link
G LINC00434 long intergenic non-protein coding RNA 434 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,214,347...60,268,104
Ensembl chr13:60,214,352...60,214,946
JBrowse link
G LINC00444 long intergenic non-protein coding RNA 444 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:47,903,806...47,935,824 JBrowse link
G LINC00446 long intergenic non-protein coding RNA 446 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,012,883...78,053,595
Ensembl chr13:77,997,909...78,053,604
JBrowse link
G LINC00448 long intergenic non-protein coding RNA 448 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,672,285...62,807,359
Ensembl chr13:62,672,285...62,796,714
JBrowse link
G LINC00458 long intergenic non-protein coding RNA 458 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:54,124,324...54,132,871
Ensembl chr13:54,115,783...54,142,319
JBrowse link
G LINC00459 long intergenic non-protein coding RNA 459 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,323,657...62,328,847
Ensembl chr13:62,323,657...62,328,833
JBrowse link
G LINC00462 long intergenic non-protein coding RNA 462 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,576,974...48,580,901
Ensembl chr13:48,576,974...48,578,088
JBrowse link
G LINC00550 long intergenic non-protein coding RNA 550 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:68,861,284...68,885,325
Ensembl chr13:68,861,284...68,885,325
JBrowse link
G LINC00558 long intergenic non-protein coding RNA 558 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:53,815,419...53,876,119
Ensembl chr13:53,815,419...53,939,960
JBrowse link
G LINC00561 long intergenic non-protein coding RNA 561 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,932,398...75,935,132
Ensembl chr13:75,932,395...75,935,132
JBrowse link
G LINC00562 long intergenic non-protein coding RNA 562 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:47,930,153...47,932,622
Ensembl chr13:47,930,153...47,932,622
JBrowse link
G LINC00564 long intergenic non-protein coding RNA 564 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:81,225,865...81,226,983
Ensembl chr13:81,225,865...81,226,983
JBrowse link
G LINC01038 long intergenic non-protein coding RNA 1038 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,804,386...79,805,682
Ensembl chr13:79,804,418...79,805,685
JBrowse link
G LINC01052 long intergenic non-protein coding RNA 1052 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:65,866,047...65,878,219
Ensembl chr13:65,866,070...65,922,731
JBrowse link
G LINC01065 long intergenic non-protein coding RNA 1065 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:53,131,746...53,151,900
Ensembl chr13:53,099,397...53,151,914
JBrowse link
G LINC01068 long intergenic non-protein coding RNA 1068 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,566,727...79,571,446
Ensembl chr13:79,566,678...79,571,445
JBrowse link
G LINC01069 long intergenic non-protein coding RNA 1069 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,979,766...77,994,773
Ensembl chr13:77,979,817...77,997,881
JBrowse link
G LINC01074 long intergenic non-protein coding RNA 1074 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,321,305...62,322,398
Ensembl chr13:62,321,305...62,322,398
JBrowse link
G LINC01075 long intergenic non-protein coding RNA 1075 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:62,212,282...62,249,951
Ensembl chr13:62,212,577...62,249,947
JBrowse link
G LINC01077 long intergenic non-protein coding RNA 1077 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,567,598...48,590,598
Ensembl chr13:48,570,639...48,573,317
JBrowse link
G LINC01078 long intergenic non-protein coding RNA 1078 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,240,588...75,252,012
Ensembl chr13:75,250,480...75,252,012
JBrowse link
G LINC01080 long intergenic non-protein coding RNA 1080 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:80,011,077...80,026,663
Ensembl chr13:80,011,077...80,028,283
JBrowse link
G LINC01442 long intergenic non-protein coding RNA 1442 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,789,787...60,941,768
Ensembl chr13:60,916,981...60,945,955
JBrowse link
G LINC02333 long intergenic non-protein coding RNA 2333 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,334,295...52,341,883
Ensembl chr13:52,334,295...52,341,896
JBrowse link
G LINC02338 long intergenic non-protein coding RNA 2338 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:58,165,827...58,209,483
Ensembl chr13:58,165,827...58,209,483
JBrowse link
G LINC02339 long intergenic non-protein coding RNA 2339 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:61,424,689...61,427,946
Ensembl chr13:61,424,689...61,427,946
JBrowse link
G LMO7 LIM domain 7 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,620,434...75,859,870
Ensembl chr13:75,620,434...75,859,870
JBrowse link
G LMO7-AS1 LMO7 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,604,700...75,635,994
Ensembl chr13:75,604,700...75,635,994
JBrowse link
G LMO7DN LMO7 downstream neighbor IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,871,038...75,883,813
Ensembl chr13:75,871,038...75,883,811
JBrowse link
G LMO7DN-IT1 LMO7DN intronic transcript 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,876,886...75,881,127
Ensembl chr13:75,876,886...75,881,127
JBrowse link
G LOC105370203 uncharacterized LOC105370203 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,235,513...49,247,840 JBrowse link
G LOC105370268 lncRNA-ACOD1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar
G LOC107457599 meiotic recombination hotspot P IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,690,561...60,694,062 JBrowse link
G LOC107882127 EDNRB upstream promoter region IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,975,613...77,976,074 JBrowse link
G LOC107882129 EDNRB proximal promoter region IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,918,760...77,919,832 JBrowse link
G LOC109461478 ATXN8 opposite strand (non-protein coding) repeat instability region IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,139,352...70,139,429 JBrowse link
G LOC110120827 VISTA enhancer hs126 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,769,477...70,770,736 JBrowse link
G LOC110120828 VISTA enhancer hs129 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,200,716...71,201,236 JBrowse link
G LOC110120829 VISTA enhancer hs131 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,197,133...72,199,738 JBrowse link
G LOC110120830 VISTA enhancer hs135 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,574,916...72,575,890 JBrowse link
G LOC110120831 VISTA enhancer hs137 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,726,717...71,728,802 JBrowse link
G LOC110120832 VISTA enhancer hs138 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,851,655...71,854,203 JBrowse link
G LOC110120833 VISTA enhancer hs141 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,426,945...72,428,915 JBrowse link
G LOC110120834 VISTA enhancer hs142 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,507,309...72,509,616 JBrowse link
G LOC110120843 VISTA enhancer hs188 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,771,848...71,774,098 JBrowse link
G LOC110120891 VISTA enhancer hs540 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,783,961...70,785,375 JBrowse link
G LOC110120897 VISTA enhancer hs575 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:67,854,985...67,856,394 JBrowse link
G LOC110120909 VISTA enhancer hs619 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:71,759,384...71,760,856 JBrowse link
G LOC110120945 VISTA enhancer hs881 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,035,667...66,036,616 JBrowse link
G LOC110120946 VISTA enhancer hs882 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:70,958,905...70,960,063 JBrowse link
G LOC110120950 VISTA enhancer hs915 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,401,880...78,403,203 JBrowse link
G LOC110121360 VISTA enhancer hs1394 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,831,993...77,833,579 JBrowse link
G LOC110121375 VISTA enhancer hs1471 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,658,111...79,660,495 JBrowse link
G LOC111365190 HNF1 motif-containing MPRA enhancer 52 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,227,924...74,228,068 JBrowse link
G LOC112163662 Sharpr-MPRA regulatory region 3717 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,066,653...48,066,947 JBrowse link
G LOC112163663 Sharpr-MPRA regulatory region 2352 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,104,673...52,104,967 JBrowse link
G LOC112163664 Sharpr-MPRA regulatory region 8029 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,850,374...52,850,668 JBrowse link
G LOC112163665 Sharpr-MPRA regulatory region 4317 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,584,335...60,584,629 JBrowse link
G LOC112163666 Sharpr-MPRA regulatory region 1301 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,625,916...63,626,210 JBrowse link
G LOC112163667 Sharpr-MPRA regulatory region 14942 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:68,057,157...68,057,451 JBrowse link
G LOC112163668 Sharpr-MPRA regulatory region 2769 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:73,090,471...73,090,765 JBrowse link
G LOC112163669 Sharpr-MPRA regulatory region 11269 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,187,632...74,187,926 JBrowse link
G LOC112163670 Sharpr-MPRA regulatory region 2285 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:74,287,712...74,288,006 JBrowse link
G LOC112163671 Sharpr-MPRA regulatory region 1150 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,409,474...77,409,768 JBrowse link
G LOC112163672 Sharpr-MPRA regulatory region 2923 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:84,399,374...84,399,668 JBrowse link
G LOC113939939 Sharpr-MPRA regulatory region 13963 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,301,133...49,301,427 JBrowse link
G LPAR6 lysophosphatidic acid receptor 6 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,400,897...48,444,669
Ensembl chr13:48,389,567...48,444,704
JBrowse link
G MED4 mediator complex subunit 4 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,075,724...48,095,104
Ensembl chr13:48,053,323...48,095,131
JBrowse link
G MED4-AS1 MED4 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,077,137...48,079,993
Ensembl chr13:48,077,137...48,079,991
JBrowse link
G MIR1297 microRNA 1297 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:54,311,972...54,312,048
Ensembl chr13:54,311,972...54,312,048
JBrowse link
G MIR15A microRNA 15a IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,049,119...50,049,201
Ensembl chr13:50,049,119...50,049,201
JBrowse link
G MIR16-1 microRNA 16-1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,048,973...50,049,061
Ensembl chr13:50,048,973...50,049,061
JBrowse link
G MIR3169 microRNA 3169 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:61,199,798...61,199,880
Ensembl chr13:61,199,798...61,199,880
JBrowse link
G MIR3613 microRNA 3613 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,996,415...49,996,501
Ensembl chr13:49,996,415...49,996,501
JBrowse link
G MIR3665 microRNA 3665 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,698,012...77,698,116
Ensembl chr13:77,698,012...77,698,116
JBrowse link
G MIR4703 microRNA 4703 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,552,589...51,552,667
Ensembl chr13:51,552,589...51,552,667
JBrowse link
G MIR4704 microRNA 4704 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,218,250...66,218,324
Ensembl chr13:66,218,250...66,218,324
JBrowse link
G MIR5007 microRNA 5007 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:55,174,454...55,174,548
Ensembl chr13:55,174,454...55,174,548
JBrowse link
G MIR548X2 microRNA 548x-2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:65,966,330...65,966,429
Ensembl chr13:65,966,330...65,966,429
JBrowse link
G MIR5693 microRNA 5693 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,348,567...51,348,639
Ensembl chr13:51,348,567...51,348,639
JBrowse link
G MIR759 microRNA 759 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,810,050...52,810,140
Ensembl chr13:52,810,050...52,810,140
JBrowse link
G MLNR motilin receptor IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,220,338...49,222,377
Ensembl chr13:49,220,338...49,222,377
JBrowse link
G MYCBP2 MYC binding protein 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,044,657...77,327,098
Ensembl chr13:77,042,474...77,327,094
JBrowse link
G MYCBP2-AS1 MYCBP2 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,075,514...77,087,776
Ensembl chr13:77,026,767...77,129,717
JBrowse link
G MYCBP2-AS2 MYCBP2 antisense RNA 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,080,511...77,081,190
Ensembl chr13:77,080,511...77,081,190
JBrowse link
G MZT1 mitotic spindle organizing protein 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,708,367...72,727,629
Ensembl chr13:72,708,367...72,727,629
JBrowse link
G NDFIP2 Nedd4 family interacting protein 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,481,155...79,556,077
Ensembl chr13:79,481,124...79,556,075
JBrowse link
G NDFIP2-AS1 NDFIP2 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,477,364...79,481,231
Ensembl chr13:79,477,364...79,481,231
JBrowse link
G NEK3 NIMA related kinase 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,132,647...52,159,597
Ensembl chr13:52,132,639...52,159,861
JBrowse link
G NEK5 NIMA related kinase 5 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,033,611...52,129,073
Ensembl chr13:52,033,611...52,129,092
JBrowse link
G NUDT15 nudix hydrolase 15 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,037,726...48,052,755
Ensembl chr13:48,037,726...48,047,221
JBrowse link
G OBI1 ORC ubiquitin ligase 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,614,286...78,659,165
Ensembl chr13:78,614,289...78,659,155
JBrowse link
G OBI1-AS1 OBI1 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,054,855...78,617,325
Ensembl chr13:77,919,689...78,617,328
JBrowse link
G OLFM4 olfactomedin 4 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:53,028,813...53,052,057
Ensembl chr13:53,028,813...53,052,057
JBrowse link
G OR7E104P olfactory receptor family 7 subfamily E member 104 pseudogene IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:63,828,840...63,844,125
Ensembl chr13:63,828,840...63,844,125
JBrowse link
G PCDH17 protocadherin 17 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,630,104...57,729,311
Ensembl chr13:57,631,744...57,729,311
JBrowse link
G PCDH20 protocadherin 20 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:61,409,685...61,415,522
Ensembl chr13:61,409,685...61,415,522
JBrowse link
G PCDH8 protocadherin 8 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,842,889...52,848,640
Ensembl chr13:52,842,889...52,848,641
JBrowse link
G PCDH9 protocadherin 9 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,302,834...67,230,336
Ensembl chr13:66,302,834...67,230,445
JBrowse link
G PCDH9-AS2 PCDH9 antisense RNA 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,825,169...66,915,031
Ensembl chr13:66,825,169...66,915,031
JBrowse link
G PCDH9-AS3 PCDH9 antisense RNA 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,977,389...66,985,776
Ensembl chr13:66,977,432...66,985,776
JBrowse link
G PCDH9-AS4 PCDH9 antisense RNA 4 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:66,990,886...67,002,000
Ensembl chr13:66,990,886...67,002,007
JBrowse link
G PHF11 PHD finger protein 11 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,495,953...49,528,992
Ensembl chr13:49,495,610...49,528,981
JBrowse link
G PIBF1 progesterone immunomodulatory binding factor 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:72,782,133...73,016,461
Ensembl chr13:72,782,133...73,016,461
JBrowse link
G POU4F1 POU class 4 homeobox 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:78,598,362...78,603,552
Ensembl chr13:78,598,362...78,603,552
JBrowse link
G PRR20A proline rich 20A IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,140,918...57,143,939
Ensembl chr13:57,140,918...57,143,939
JBrowse link
G PRR20B proline rich 20B IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,147,488...57,150,509
Ensembl chr13:57,147,488...57,150,509
JBrowse link
G PRR20C proline rich 20C IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,154,061...57,157,082
Ensembl chr13:57,140,918...57,157,082
JBrowse link
G PRR20D proline rich 20D IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,160,632...57,163,653
Ensembl chr13:57,160,632...57,163,653
JBrowse link
G PRR20E proline rich 20E IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:57,167,197...57,170,218
Ensembl chr13:57,167,197...57,170,218
JBrowse link
G RB1 RB transcriptional corepressor 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436
JBrowse link
G RB1-DT RB1 divergent transcript IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,296,513...48,303,702
Ensembl chr13:48,296,162...48,303,661
JBrowse link
G RBM26 RNA binding motif protein 26 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,311,827...79,406,255
Ensembl chr13:79,311,824...79,406,477
JBrowse link
G RBM26-AS1 RBM26 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:79,406,309...79,424,336
Ensembl chr13:79,406,293...79,427,317
JBrowse link
G RCBTB1 RCC1 and BTB domain containing protein 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,531,944...49,585,587
Ensembl chr13:49,531,946...49,585,558
JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,488,963...48,535,997
Ensembl chr13:48,488,963...48,533,256
JBrowse link
G RNASEH2B ribonuclease H2 subunit B IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,909,678...50,970,462
Ensembl chr13:50,909,747...51,024,120
JBrowse link
G RNASEH2B-AS1 RNASEH2B antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:50,882,378...50,910,712
Ensembl chr13:50,862,172...50,910,764
JBrowse link
G SCEL sciellin IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,535,694...77,645,263
Ensembl chr13:77,535,674...77,645,263
JBrowse link
G SCEL-AS1 SCEL antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,599,755...77,606,551
Ensembl chr13:77,599,755...77,606,551
JBrowse link
G SERPINE3 serpin family E member 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,335,804...51,365,454
Ensembl chr13:51,335,773...51,364,735
JBrowse link
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,444,274...49,495,003
Ensembl chr13:49,444,374...49,495,003
JBrowse link
G SETDB2-PHF11 SETDB2-PHF11 readthrough IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,444,274...49,528,976 JBrowse link
G SLAIN1 SLAIN motif family member 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:77,697,674...77,764,231
Ensembl chr13:77,697,687...77,764,242
JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:83,877,205...83,882,474
Ensembl chr13:83,877,205...83,882,474
JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:85,792,790...85,799,419
Ensembl chr13:85,792,790...85,806,683
JBrowse link
G SNORA107 small nucleolar RNA, H/ACA box 107 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:84,783,654...84,783,778 JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G SPRYD7 SPRY domain containing 7 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,912,702...49,936,501
Ensembl chr13:49,912,702...49,936,490
JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:47,942,656...48,001,273
Ensembl chr13:47,745,736...48,037,968
JBrowse link
G SUCLA2-AS1 SUCLA2 antisense RNA 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:48,001,389...48,002,614
Ensembl chr13:48,001,389...48,002,552
JBrowse link
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,652,703...52,700,909
Ensembl chr13:52,652,709...52,700,909
JBrowse link
G SUGT1-DT SUGT1 divergent transcript IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,651,305...52,652,307
Ensembl chr13:52,651,305...52,652,279
JBrowse link
G TBC1D4 TBC1 domain family member 4 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,283,503...75,483,144
Ensembl chr13:75,283,503...75,482,169
JBrowse link
G TDRD3 tudor domain containing 3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:60,396,457...60,573,879
Ensembl chr13:60,396,457...60,573,878
JBrowse link
G THSD1 thrombospondin type 1 domain containing 1 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,377,167...52,406,172
Ensembl chr13:52,377,167...52,416,373
JBrowse link
G TMEM272 transmembrane protein 272 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,813,347...51,845,177
Ensembl chr13:51,813,347...51,845,177
JBrowse link
G TRIM13 tripartite motif containing 13 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:49,997,042...50,018,467
Ensembl chr13:49,995,888...50,020,481
JBrowse link
G UCHL3 ubiquitin C-terminal hydrolase L3 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:75,549,490...75,606,020
Ensembl chr13:75,549,480...75,606,020
JBrowse link
G UTP14C UTP14C small subunit processome component IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,024,691...52,033,600
Ensembl chr13:52,024,691...52,033,600
JBrowse link
G VPS36 vacuolar protein sorting 36 homolog IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:52,412,606...52,450,634
Ensembl chr13:52,412,602...52,450,634
JBrowse link
G WDFY2 WD repeat and FYVE domain containing 2 IAGP ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome ClinVar NCBI chr13:51,584,194...51,767,709
Ensembl chr13:51,584,455...51,767,709
JBrowse link
diffuse midline glioma, H3 K27M-mutant term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 IAGP ClinVar Annotator: match by term: Diffuse intrinsic pontine glioma ClinVar PMID:24705250 PMID:24705254 PMID:26619011 PMID:31779674 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G BRIP1 BRCA1 interacting helicase 1 IAGP ClinVar Annotator: match by term: Diffuse intrinsic pontine glioma ClinVar PMID:16116424 PMID:16973432 PMID:18510924 PMID:19099189 PMID:19150983 More... NCBI chr17:61,679,139...61,864,120
Ensembl chr17:61,679,139...61,863,559
JBrowse link
G CHEK2 checkpoint kinase 2 IAGP ClinVar Annotator: match by term: Diffuse intrinsic pontine glioma ClinVar PMID:10617473 PMID:11053450 PMID:11479205 PMID:11719428 PMID:11967536 More... NCBI chr22:28,687,743...28,741,866
Ensembl chr22:28,687,743...28,742,422
JBrowse link
G NF1 neurofibromin 1 IAGP ClinVar Annotator: match by term: Diffuse intrinsic pontine glioma ClinVar PMID:25741868 PMID:28492532 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116
JBrowse link
dysembryoplastic neuroepithelial tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRAF B-Raf proto-oncogene, serine/threonine kinase IAGP DNA:mutation:cds:p.V600E(human) RGD PMID:25346165 RGD:11567238 NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929
JBrowse link
Ependymomas term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL7C BAF chromatin remodeling complex subunit BCL7C EXP CTD Direct Evidence: marker/mechanism CTD PMID:26075792 NCBI chr16:30,833,626...30,894,716
Ensembl chr16:30,833,626...30,894,302
JBrowse link
G EPHB2 EPH receptor B2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26075792 NCBI chr 1:22,710,770...22,921,500
Ensembl chr 1:22,710,839...22,921,500
JBrowse link
G GDNF glial cell derived neurotrophic factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:19138852 NCBI chr 5:37,812,677...37,840,044
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G IGF2 insulin like growth factor 2 IEP mRNA:increased expression:cerebellum RGD PMID:18478565 RGD:5509961 NCBI chr11:2,129,117...2,149,566
Ensembl chr11:2,129,112...2,141,238
JBrowse link
G RAB3A RAB3A, member RAS oncogene family EXP CTD Direct Evidence: marker/mechanism CTD PMID:26075792 NCBI chr19:18,196,784...18,204,042
Ensembl chr19:18,196,784...18,204,042
JBrowse link
G RTBDN retbindin EXP CTD Direct Evidence: marker/mechanism CTD PMID:26075792 NCBI chr19:12,825,482...12,835,428
Ensembl chr19:12,825,478...12,835,428
JBrowse link
G SHC3 SHC adaptor protein 3 IAGP DNA:amplification:brain: RGD PMID:19748727 RGD:13782069 NCBI chr 9:89,005,771...89,178,818
Ensembl chr 9:89,005,771...89,178,818
JBrowse link
G ZNF668 zinc finger protein 668 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26075792 NCBI chr16:31,060,847...31,074,240
Ensembl chr16:31,060,843...31,074,240
JBrowse link
familial retinoblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RB1 RB transcriptional corepressor 1 IAGP DNA:mutations:promoter, intron, exon:multiple RGD PMID:17096365 RGD:8547984 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436
JBrowse link
fibrillary astrocytoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KRAS KRAS proto-oncogene, GTPase IEP mRNA:decreased expression:brain RGD PMID:19179066 RGD:13702872 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
glioblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR3 actin related protein 3 IEP mRNA:increased expression:brain (human) RGD PMID:25682201 RGD:11570557 NCBI chr 2:113,889,934...113,962,596
Ensembl chr 2:113,890,063...113,962,596
JBrowse link
G ADGRB1 adhesion G protein-coupled receptor B1 treatment IDA
IEP
mRNA:decreased expression:brain: RGD PMID:16244591 PMID:12507886 RGD:13831352, RGD:13831355 NCBI chr 8:142,449,649...142,545,009
Ensembl chr 8:142,449,430...142,545,009
JBrowse link
G ADGRL4 adhesion G protein-coupled receptor L4 treatment
severity
ISO
IEP
RGD PMID:27416955 PMID:23096411 PMID:23096411 RGD:13838664, RGD:13838665, RGD:13838665 NCBI chr 1:78,889,764...79,006,730
Ensembl chr 1:78,889,764...79,282,124
JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:10802656 RGD:734543 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751
JBrowse link
G AKT3 AKT serine/threonine kinase 3 disease_progression IDA RGD PMID:27422127 RGD:13674164 NCBI chr 1:243,488,233...243,851,079
Ensembl chr 1:243,488,233...243,851,079
JBrowse link
G APC APC regulator of WNT signaling pathway EXP CTD Direct Evidence: marker/mechanism CTD PMID:7661930 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,498...112,846,239
JBrowse link
G ASPM assembly factor for spindle microtubules IEP mRNA:increased expression:brain: RGD PMID:18636190 RGD:13439742 NCBI chr 1:197,084,127...197,146,669
Ensembl chr 1:197,084,121...197,146,694
JBrowse link
G ATM ATM serine/threonine kinase IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:9054948 PMID:19781682 PMID:23322442 PMID:25525159 PMID:25741868 More... NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,223,044...108,369,102
JBrowse link
G ATRX ATRX chromatin remodeler disease_progression IEP
IAGP
ClinVar Annotator: match by term: Glioblastoma multiforme, somatic ClinVar PMID:27478330 RGD:13442489 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G BAG3 BAG cochaperone 3 treatment ISO RGD PMID:21561597 RGD:5687132 NCBI chr10:119,651,380...119,677,819
Ensembl chr10:119,651,380...119,677,819
JBrowse link
G BCHE butyrylcholinesterase EXP CTD Direct Evidence: marker/mechanism CTD PMID:2317787 NCBI chr 3:165,772,904...165,837,423
Ensembl chr 3:165,772,904...165,837,462
JBrowse link
G BECN1 beclin 1 disease_progression IEP RGD PMID:20863706 RGD:6483102 NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23582323 NCBI chr 3:4,979,420...4,985,323
Ensembl chr 3:4,979,437...4,985,323
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger EXP CTD Direct Evidence: marker/mechanism CTD PMID:19823589 NCBI chr10:22,321,099...22,331,484
Ensembl chr10:22,321,099...22,331,484
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:12068308 PMID:12198537 PMID:12447372 PMID:12460918 PMID:12460919 More... NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929
JBrowse link
G BRD2 bromodomain containing 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:27388964 NCBI chr 6:32,968,594...32,981,505
Ensembl chr 6:32,968,594...32,981,505
JBrowse link
G BRD4 bromodomain containing 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:26455392 PMID:27388964 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545
JBrowse link
G BRD7 bromodomain containing 7 IEP protein:increased expression:brain: RGD PMID:24404152 RGD:9586441 NCBI chr16:50,315,957...50,368,988
Ensembl chr16:50,313,487...50,368,988
JBrowse link
G C11orf65 chromosome 11 open reading frame 65 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:9054948 PMID:19781682 PMID:23322442 PMID:25525159 PMID:25741868 More... NCBI chr11:108,308,519...108,469,832
Ensembl chr11:108,308,519...108,467,531
JBrowse link
G CBX6 chromobox 6 disease_progression IEP mRNA,protein:decreased expression:astrocyte: RGD PMID:24260522 RGD:9587354 NCBI chr22:38,861,422...38,872,216
Ensembl chr22:38,861,422...38,872,249
JBrowse link
G CBX7 chromobox 7 disease_progression IEP mRNA,protein:decreased expression:astrocyte: RGD PMID:24260522 RGD:9587354 NCBI chr22:39,130,772...39,152,680
Ensembl chr22:39,120,167...39,152,680
JBrowse link
G CBX8 chromobox 8 IEP mRNA:increased expression:astrocyte: RGD PMID:24260522 RGD:9587354 NCBI chr17:79,792,132...79,797,077
Ensembl chr17:79,792,132...79,801,683
JBrowse link
G CCNH cyclin H EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 5:87,311,471...87,412,971
Ensembl chr 5:87,318,416...87,412,930
JBrowse link
G CD9 CD9 molecule EXP CTD Direct Evidence: marker/mechanism CTD PMID:26573230 NCBI chr12:6,199,946...6,238,266
Ensembl chr12:6,199,715...6,238,271
JBrowse link
G CDK4 cyclin dependent kinase 4 IAGP DNA:amplication RGD PMID:23796897 RGD:13702089 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CDK6 cyclin dependent kinase 6 severity EXP
IEP
CTD Direct Evidence: marker/mechanism CTD PMID:20534551 PMID:10884881 RGD:13702095 NCBI chr 7:92,604,921...92,836,573
Ensembl chr 7:92,604,921...92,836,573
JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A treatment IMP RGD PMID:10720483 RGD:8552659 NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301
JBrowse link
G CHAF1B chromatin assembly factor 1 subunit B IEP protein:increased expression:brain: RGD PMID:24039914 RGD:9587472 NCBI chr21:36,380,145...36,419,015
Ensembl chr21:36,385,392...36,419,015
JBrowse link
G CHI3L1 chitinase 3 like 1 IEP
EXP
mRNA:increased expression:brain, tumor (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:21029458 PMID:11161003 RGD:4892621 NCBI chr 1:203,178,931...203,186,704
Ensembl chr 1:203,178,931...203,186,704
JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 disease_progression ISO RGD PMID:23360795 RGD:9685152 NCBI chr15:82,543,201...82,648,795
Ensembl chr15:82,543,201...82,648,861
JBrowse link
G CREBBP CREB binding protein IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:21390126 PMID:21680795 PMID:21796119 PMID:22832583 PMID:23334668 More... NCBI chr16:3,725,054...3,880,727
Ensembl chr16:3,725,054...3,880,713
JBrowse link
G CSTA cystatin A EXP CTD Direct Evidence: marker/mechanism CTD PMID:22287159 NCBI chr 3:122,325,248...122,341,969
Ensembl chr 3:122,325,248...122,341,969
JBrowse link
G CSTB cystatin B EXP CTD Direct Evidence: marker/mechanism CTD PMID:22287159 NCBI chr21:43,773,950...43,776,308
Ensembl chr21:43,772,511...43,776,330
JBrowse link
G CTNND2 catenin delta 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23917401 NCBI chr 5:10,971,836...11,904,446
Ensembl chr 5:10,971,836...11,904,446
JBrowse link
G CTSB cathepsin B IEP
EXP
protein:increased expression:glioma cell (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:22287159 PMID:17898873 RGD:2315515 NCBI chr 8:11,842,524...11,868,087
Ensembl chr 8:11,842,524...11,869,533
JBrowse link
G CTSH cathepsin H IEP protein:increased expression:brain RGD PMID:8640738 RGD:1549417 NCBI chr15:78,921,058...78,945,089
Ensembl chr15:78,921,058...78,949,574
JBrowse link
G CTSK cathepsin K EXP CTD Direct Evidence: marker/mechanism CTD PMID:25356585 NCBI chr 1:150,796,208...150,808,260
Ensembl chr 1:150,794,880...150,809,577
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16356833 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,541...73,743,716
JBrowse link
G DEUP1 deuterosome assembly protein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr11:93,329,079...93,438,470
Ensembl chr11:93,329,971...93,438,487
JBrowse link
G DMBT1 deleted in malignant brain tumors 1 IAGP DNA:deletion RGD PMID:9288095 RGD:1599778 NCBI chr10:122,560,677...122,643,736
Ensembl chr10:122,560,665...122,643,736
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar NCBI chr 2:25,227,874...25,342,590
Ensembl chr 2:25,227,855...25,342,590
JBrowse link
G DUSP6 dual specificity phosphatase 6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21499306 NCBI chr12:89,347,235...89,352,501
Ensembl chr12:89,347,235...89,352,501
JBrowse link
G E2F1 E2F transcription factor 1 disease_progression IEP RGD PMID:16264179 RGD:13702471 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385
JBrowse link
G EGF epidermal growth factor susceptibility EXP
IAGP
CTD Direct Evidence: marker/mechanism
DNA:polymorphism:promoter:+61A>G(human)
CTD PMID:16598420 PMID:22481252 RGD:13702472 NCBI chr 4:109,912,883...110,013,766
Ensembl chr 4:109,912,883...110,013,766
JBrowse link
G EGFR epidermal growth factor receptor IAGP
EXP
ClinVar Annotator: match by term: Glioblastoma
ClinVar Annotator: match by term: Glioblastoma multiforme, somatic
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:2302402 PMID:15118073 PMID:15118125 PMID:15329413 PMID:15710947 More... NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 severity IEP protein:increased expression:brain (human) RGD PMID:21195542 RGD:13204719 NCBI chr 6:131,808,020...131,895,155
Ensembl chr 6:131,808,016...131,895,155
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit treatment IMP RGD PMID:25595591 RGD:14928319 NCBI chr 7:148,807,374...148,884,344
Ensembl chr 7:148,807,257...148,884,321
JBrowse link
G FABP7 fatty acid binding protein 7 severity IEP mRNA, protein:increased expression:brain (human) RGD PMID:15827123 RGD:1578468 NCBI chr 6:122,749,201...122,784,074
Ensembl chr 6:122,779,716...122,784,074
JBrowse link
G FAT1 FAT atypical cadherin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23354438 NCBI chr 4:186,587,789...186,726,696
Ensembl chr 4:186,587,794...186,726,722
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:26619011 NCBI chr 4:152,320,544...152,536,873
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:25705862 PMID:26619011 PMID:26942290 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand treatment IMP RGD PMID:18079358 RGD:11049502 NCBI chr19:49,474,172...49,487,037
Ensembl chr19:49,474,207...49,486,231
JBrowse link
G FN1 fibronectin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17099729 NCBI chr 2:215,360,862...215,436,167
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit EXP CTD Direct Evidence: marker/mechanism CTD PMID:23582323 NCBI chr 2:28,392,855...28,417,317
Ensembl chr 2:28,392,448...28,417,317
JBrowse link
G GDNF glial cell derived neurotrophic factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:19138852 NCBI chr 5:37,812,677...37,840,044
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GRIK2 glutamate ionotropic receptor kainate type subunit 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 6:101,393,708...102,070,083
Ensembl chr 6:100,962,701...102,081,622
JBrowse link
G GSTT1 glutathione S-transferase theta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16874663
G H2AX H2A.X variant histone EXP CTD Direct Evidence: marker/mechanism CTD PMID:26651356 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,854...119,095,467
JBrowse link
G H3-3A H3.3 histone A IAGP
EXP
ClinVar Annotator: match by term: Glioblastoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:22286216 PMID:23817572 PMID:26619011 PMID:26822237 NCBI chr 1:226,061,831...226,072,019
Ensembl chr 1:226,061,851...226,072,019
JBrowse link
G H3C2 H3 clustered histone 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22286216 NCBI chr 6:26,031,589...26,032,099
Ensembl chr 6:26,031,589...26,032,099
JBrowse link
G HEATR1 HEAT repeat containing 1 IEP mRNA, protein:increased expression:brain RGD PMID:25126583 RGD:10761721 NCBI chr 1:236,549,005...236,604,516
Ensembl chr 1:236,549,005...236,604,516
JBrowse link
G HES1 hes family bHLH transcription factor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,762,371...79,767,857
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:12811834 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G HRAS HRas proto-oncogene, GTPase severity ISO
IAGP
IEP
DNA:missense mutation:cds:p.G61L(human)
ClinVar Annotator: match by term: Glioblastoma
ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... RGD:13702475, RGD:13702872 NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 disease_progression
onset
IAGP DNA:mutation:cds:p.R132(human)
ClinVar Annotator: match by term: Glioblastoma
ClinVar Annotator: match by term: Glioblastoma multiforme, somatic
DNA:mutation:cds:p.R132H(human)
ClinVar PMID:18772396 PMID:19657110 PMID:19798509 PMID:19818334 PMID:20946881 More... RGD:11074562, RGD:11522732 NCBI chr 2:208,236,227...208,255,071
Ensembl chr 2:208,236,229...208,266,074
JBrowse link
G IFNA2 interferon alpha 2 EXP CTD Direct Evidence: therapeutic CTD PMID:18679580 NCBI chr 9:21,384,255...21,385,398
Ensembl chr 9:21,384,255...21,385,398
JBrowse link
G IL16 interleukin 16 ISO protein:increased expression:brain RGD PMID:17221335 RGD:5024941 NCBI chr15:81,196,879...81,314,058
Ensembl chr15:81,159,575...81,314,058
JBrowse link
G IL1B interleukin 1 beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:16356833 NCBI chr 2:112,829,751...112,836,843
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL2 interleukin 2 EXP CTD Direct Evidence: therapeutic CTD PMID:7719933 NCBI chr 4:122,451,470...122,456,725
Ensembl chr 4:122,451,470...122,456,725
JBrowse link
G JAG1 jagged canonical Notch ligand 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999
JBrowse link
G JAG2 jagged canonical Notch ligand 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21127729 NCBI chr14:105,140,981...105,168,776
Ensembl chr14:105,140,982...105,168,824
JBrowse link
G KCNC2 potassium voltage-gated channel subfamily C member 2 IEP mRNA:splice variant (human) RGD PMID:18474104 RGD:9686067 NCBI chr12:75,040,078...75,209,839
Ensembl chr12:75,040,077...75,209,839
JBrowse link
G KDR kinase insert domain receptor treatment IMP RGD PMID:26325365 RGD:11529678 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G KRAS KRAS proto-oncogene, GTPase treatment ISO
IEP
mRNA:decreased expression:brain RGD PMID:16166301 PMID:19179066 RGD:13702861, RGD:13702872 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G L1CAM L1 cell adhesion molecule IEP mRNA:decreased expression:brain, temporal lobe (human) RGD PMID:20419098 RGD:6483067 NCBI chr  X:153,861,514...153,886,173
Ensembl chr  X:153,861,514...153,886,173
JBrowse link
G LRRC56 leucine rich repeat containing 56 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr11:518,967...554,916
Ensembl chr11:537,527...554,912
JBrowse link
G LRRC59 leucine rich repeat containing 59 EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr17:50,381,238...50,397,523
Ensembl chr17:50,375,059...50,397,523
JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:27270107 NCBI chr19:40,593,166...40,629,820
Ensembl chr19:40,592,883...40,629,818
JBrowse link
G LZTR1 leucine zipper like transcription regulator 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23917401 NCBI chr22:20,982,297...20,999,032
Ensembl chr22:20,982,269...20,999,032
JBrowse link
G MACIR macrophage immunometabolism regulator EXP CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 5:103,258,374...103,278,660
Ensembl chr 5:103,258,763...103,278,660
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha treatment IDA RGD PMID:24905460 RGD:11561946 NCBI chr20:34,546,823...34,560,345
Ensembl chr20:34,546,854...34,560,345
JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 treatment IEP RGD PMID:26189368 RGD:13702862 NCBI chr19:4,090,321...4,124,184
Ensembl chr19:4,090,321...4,124,122
JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 disease_progression IEP protein:increased expression, increased phosphorylation:brain RGD PMID:17406030 RGD:1641940 NCBI chr17:21,284,679...21,315,240
Ensembl chr17:21,284,672...21,315,232
JBrowse link
G MDM2 MDM2 proto-oncogene IAGP DNA:amplication RGD PMID:23796897 RGD:13702089 NCBI chr12:68,808,149...68,850,686
Ensembl chr12:68,808,177...68,845,544
JBrowse link
G MDM4 MDM4 regulator of p53 EXP CTD Direct Evidence: marker/mechanism CTD PMID:20472715 NCBI chr 1:204,516,377...204,558,120
Ensembl chr 1:204,516,379...204,558,120
JBrowse link
G MED12 mediator complex subunit 12 IAGP ClinVar Annotator: match by term: Glioblastoma ClinVar PMID:26822237 NCBI chr  X:71,118,596...71,142,450
Ensembl chr  X:71,118,556...71,142,454
JBrowse link