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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:glomerulonephritis
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Accession:DOID:2921 term browser browse the term
Definition:A nephritis that causes inflammation of the glomeruli located_in kidney. (DO)
Synonyms:exact_synonym: Bright Disease;   Glomerulonephritides
 related_synonym: Primary Glomerulonephritis
 primary_id: MESH:D005921
 xref: GARD:6516;   MONDO:0002462;   NCI:C26784
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme ISO RGD PMID:19164508 RGD:2325229 NCBI chr17:57,556,294...57,577,294
Ensembl chr17:62,702,341...62,733,853
JBrowse link
G ADM adrenomedullin ISO associated with Anti-Glomerular Basement Membrane Disease
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:15063164 PMID:15680492 PMID:16735801 PMID:20431304 RGD:1625317 RGD:2325320 NCBI chr11:10,437,712...10,440,053
Ensembl chr11:10,165,418...10,167,842
JBrowse link
G AGT angiotensinogen disease_progression ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:11459117 PMID:15888567 RGD:13432360 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19139720 RGD:6903845 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G AIF1 allograft inflammatory factor 1 ISO protein:increased expression:kidney (rat) RGD PMID:17035944 RGD:2313038 NCBI chr 6:31,276,215...31,278,051
Ensembl chr 6:32,166,301...32,168,125
JBrowse link
G ALB albumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:3160244 PMID:6343549 PMID:6769622 PMID:8501856 PMID:17161813 More... NCBI chr 4:50,773,244...50,790,474
Ensembl chr 4:56,605,322...56,622,418
JBrowse link
G ALOX15 arachidonate 15-lipoxygenase ISO RGD PMID:7967345 RGD:5128564 NCBI chr17:4,686,339...4,696,877
Ensembl chr17:4,677,125...4,687,669
JBrowse link
G ALOX5AP arachidonate 5-lipoxygenase activating protein onset ISO protein:increased expression:glomerulus, endothelial cell, cytoplasm (rat) RGD PMID:14733414 RGD:2313931 NCBI chr13:12,012,399...12,041,557
Ensembl chr13:30,425,510...30,476,607
JBrowse link
G ANXA5 annexin A5 ISO RGD PMID:11271515 RGD:7241853 NCBI chr 4:113,868,218...113,897,243
Ensembl chr 4:125,006,038...125,034,972
JBrowse link
G APOE apolipoprotein E ISO Apoe(-/-) Id3(-/-) double knockout RGD PMID:21801865 RGD:6903286 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G AXL AXL receptor tyrosine kinase ISO RGD PMID:11290560 RGD:1579882 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747
JBrowse link
G BCL2L11 BCL2 like 11 ISO RGD PMID:10576740 RGD:734641 NCBI chr2A:90,862,070...90,909,833
Ensembl chr2A:112,337,927...112,385,079
JBrowse link
G BDKRB1 bradykinin receptor B1 ISO RGD PMID:20448019 RGD:7241551 NCBI chr14:76,885,923...76,894,456 JBrowse link
G C1QA complement C1q A chain susceptibility ISO DNA:nonsense mutation (human) RGD PMID:8840296 RGD:1600549 NCBI chr 1:21,821,927...21,825,020 JBrowse link
G C3 complement C3 ISO RGD PMID:11950907 RGD:5129550 NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
JBrowse link
G C6 complement C6 ISO RGD PMID:10807586 RGD:1600489 NCBI chr 5:69,174,411...69,245,801
Ensembl chr 5:74,216,244...74,288,588
JBrowse link
G CCL1 C-C motif chemokine ligand 1 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:10385480 PMID:11157384 RGD:8693624 NCBI chr17:22,425,022...22,430,243
Ensembl chr17:22,719,425...22,722,341
JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10385480 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10385480 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G CD163 CD163 molecule ISO associated with liver disease;protein:increased expression:blood serum (human) RGD PMID:26339412 RGD:11251207 NCBI chr12:7,616,714...7,649,768
Ensembl chr12:7,775,343...7,810,023
JBrowse link
G CD59 CD59 molecule (CD59 blood group) ISO RGD PMID:7523753 RGD:1600500 NCBI chr11:33,680,580...33,708,479
Ensembl chr11:33,552,164...33,590,157
JBrowse link
G CFD complement factor D ISO CTD Direct Evidence: marker/mechanism CTD PMID:14675043
G CFH complement factor H ISO RGD PMID:17344423 RGD:7365002 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CFI complement factor I ISO MouseDO NCBI chr 4:102,236,868...102,311,359
Ensembl chr 4:112,804,645...112,865,581
JBrowse link
G CNDP1 carnosine dipeptidase 1 ISO RGD PMID:20851293 RGD:7207223 NCBI chr18:67,920,453...67,982,843
Ensembl chr18:71,162,331...71,188,879
Ensembl chr18:71,162,331...71,188,879
JBrowse link
G COL4A3 collagen type IV alpha 3 chain ISO RGD PMID:11158397 RGD:1600928 NCBI chr2B:114,410,703...114,559,336
Ensembl chr2B:233,294,783...233,371,021
JBrowse link
G COL4A4 collagen type IV alpha 4 chain ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:12325029 PMID:17216251 PMID:21196518 PMID:24052634 PMID:24854265 More... NCBI chr2B:114,227,135...114,410,564
Ensembl chr2B:233,065,678...233,205,892
JBrowse link
G CPB2 carboxypeptidase B2 ISO RGD PMID:18612543 RGD:7243117 NCBI chr13:26,926,788...26,979,767 JBrowse link
G CSF1 colony stimulating factor 1 ISO RGD PMID:11477167 RGD:7257579 NCBI chr 1:112,555,755...112,575,894
Ensembl chr 1:127,764,916...127,781,943
JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 ISO mRNA, protein:increased expression:glomerulus, urine RGD PMID:14605272 RGD:4891995 NCBI chr16:37,646,447...37,659,078
Ensembl chr16:56,779,065...56,791,760
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISO mRNA:increased expression:glomerulus RGD PMID:10432400 PMID:14605272 RGD:4891995 RGD:4892027 NCBI chr 3:39,158,346...39,176,604
Ensembl chr 3:39,440,955...39,457,219
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chr 4:50,452,857...50,456,015
Ensembl chr 4:56,286,708...56,288,083
JBrowse link
G CXCR3 C-X-C motif chemokine receptor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12517959 NCBI chr  X:60,880,759...60,883,355
Ensembl chr  X:70,933,160...70,935,756
JBrowse link
G DES desmin ISO CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chr2B:106,675,761...106,684,129
Ensembl chr2B:225,266,261...225,273,604
JBrowse link
G ELANE elastase, neutrophil expressed ISO RGD PMID:19752320 RGD:6907051 NCBI chr19:276,499...280,598 JBrowse link
G EP300 E1A binding protein p300 ISO protein:increased expression:glomerulus, renal tubule (human) RGD PMID:17125594 RGD:7327154 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G ESR1 estrogen receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chr 6:149,507,599...149,918,523
Ensembl chr 6:154,317,002...154,631,551
JBrowse link
G F2 coagulation factor II, thrombin ISO protein:increased expression;urine RGD PMID:15164604 PMID:17519558 RGD:6893586 RGD:6893593 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157
JBrowse link
G FAS Fas cell surface death receptor treatment ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:9466307 PMID:21880982 PMID:36999444 RGD:8686428 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
JBrowse link
G FBN1 fibrillin 1 ISO mRNA, protein:increased expression:renal glomerulus (rat)
mRNA:increased expression:renal cortex, renal glomerulus (rat)
RGD PMID:16282705 PMID:16395273 RGD:7365077 RGD:7387262 NCBI chr15:27,358,780...27,593,539
Ensembl chr15:45,682,450...45,918,111
JBrowse link
G FCGR2B Fc gamma receptor IIb ISO RGD PMID:19640933 RGD:5508403 NCBI chr 1:137,074,342...137,090,962
Ensembl chr 1:140,882,043...140,890,637
JBrowse link
G FCGR3A Fc gamma receptor IIIa susceptibility ISO associated with Lupus Erythematosus, Systemic;DNA:SNP:cds:p.V158F (human) RGD PMID:17596285 PMID:19050295 RGD:5508439 RGD:5508454 NCBI chr 1:137,027,943...137,036,738 JBrowse link
G FN1 fibronectin 1 disease_progression ISO RGD PMID:20484935 RGD:7206839 NCBI chr2B:102,623,568...102,698,747
Ensembl chr2B:221,208,431...221,284,003
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11880336 RGD:7242278 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766
JBrowse link
G GAS6 growth arrest specific 6 ISO RGD PMID:11290560 RGD:1579882 Ensembl chr13:113,968,843...114,009,562 JBrowse link
G GJA5 gap junction protein alpha 5 ISO RGD PMID:22945766 RGD:7207390 NCBI chr 1:123,200,111...123,224,626
Ensembl chr 1:112,328,337...112,329,413
JBrowse link
G IFNG interferon gamma ISO associated with kidney transplantation;mRNA:increased expression:kidney
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:1825860 PMID:21546865 PMID:22495297 RGD:6893377 RGD:6893462 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IL10 interleukin 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10910440 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
JBrowse link
G IL18 interleukin 18 ISO CTD Direct Evidence: therapeutic CTD PMID:18462998 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IL1A interleukin 1 alpha ISO associated with Malaria RGD PMID:10469263 RGD:6907108 NCBI chr2A:89,273,482...89,284,421
Ensembl chr2A:113,784,854...113,795,801
JBrowse link
G IL1B interleukin 1 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G IL1R1 interleukin 1 receptor type 1 ISO RGD PMID:17500042 RGD:7207036 Ensembl chr2A:103,193,131...103,230,005 JBrowse link
G IL1RN interleukin 1 receptor antagonist ISO mouse model treated with human protein
mRNA:increased expression:kidney (mouse)
RGD PMID:21304992 PMID:22241891 RGD:6906885 RGD:6906960 NCBI chr2A:88,991,646...89,008,013
Ensembl chr2A:114,061,182...114,078,839
JBrowse link
G IL2 interleukin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chr 4:114,637,328...114,642,586
Ensembl chr 4:125,782,563...125,787,984
JBrowse link
G IL2RA interleukin 2 receptor subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:10910440 NCBI chr10:6,053,549...6,103,863 JBrowse link
G IL6 interleukin 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G INF2 inverted formin 2 ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chr14:85,339,478...85,366,336
Ensembl chr14:105,145,779...105,163,154
JBrowse link
G ITGA3 integrin subunit alpha 3 ISO protein:decreased expression:glomerulus (rat) RGD PMID:19662603 RGD:2325666 NCBI chr17:44,145,974...44,181,343
Ensembl chr17:49,019,892...49,055,245
JBrowse link
G ITGAM integrin subunit alpha M ISO RGD PMID:19752320 RGD:6907051 NCBI chr16:23,634,476...23,707,147
Ensembl chr16:31,630,146...31,702,406
JBrowse link
G ITGB1 integrin subunit beta 1 ISO protein:decreased expression:glomerulus (rat) RGD PMID:19662603 RGD:2325666 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031
JBrowse link
G ITGB2 integrin subunit beta 2 ISO RGD PMID:15277234 PMID:19752320 RGD:6907051 RGD:6907066 NCBI chr21:31,181,228...31,216,033
Ensembl chr21:44,470,999...44,505,963
JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:8083378 PMID:11051455 RGD:6907411 RGD:6907420 NCBI chr17:10,134,450...10,194,596
Ensembl chr17:10,353,111...10,392,382
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:18443593 NCBI chr19:17,755,331...17,757,164 JBrowse link
G KLKB1 kallikrein B1 ISO protein:increased expression:plasma: RGD PMID:2173275 RGD:7327152 NCBI chr 4:178,398,359...178,429,448
Ensembl chr 4:190,604,901...190,636,300
JBrowse link
G LAMB2 laminin subunit beta 2 ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:16282705 RGD:7387262 NCBI chr2A:32,956,937...33,409,286
Ensembl chr2A:33,667,191...34,120,602
JBrowse link
G LTC4S leukotriene C4 synthase ISO protein:altered activity:kidney, cortex (rat) RGD PMID:7827126 RGD:2316641 NCBI chr 5:174,946,346...174,950,805 JBrowse link
G MAPK1 mitogen-activated protein kinase 1 ISO RGD PMID:20203158 RGD:7243972 NCBI chr22:3,883,119...3,990,368
Ensembl chr22:20,365,487...20,450,335
JBrowse link
G MMP3 matrix metallopeptidase 3 ISO RGD PMID:15034162 PMID:23224597 RGD:7241253 RGD:8694105 NCBI chr11:97,776,729...97,784,549
Ensembl chr11:101,267,566...101,275,354
JBrowse link
G MPO myeloperoxidase disease_progression ISO RGD PMID:17267745 PMID:19238910 RGD:7174702 RGD:7174705 NCBI chr17:52,333,882...52,357,838
Ensembl chr17:57,201,073...57,212,111
JBrowse link
G MS4A1 membrane spanning 4-domains A1 ISO protein:increased expression:kidney, glomerulus (rat) RGD PMID:7538648 RGD:2316995 NCBI chr11:55,691,750...55,706,697
Ensembl chr11:59,134,617...59,149,521
JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO DNA:transition:cds:g.677C>T (human) RGD PMID:22111818 RGD:6893468 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419
JBrowse link
G MYH9 myosin heavy chain 9 ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chr22:17,200,623...17,305,826
Ensembl chr22:35,039,101...35,121,618
JBrowse link
G NGF nerve growth factor ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:serum
CTD
RGD
PMID:19169037 PMID:24244623 RGD:7242783 NCBI chr 1:87,223,597...87,276,759 JBrowse link
G NPPA natriuretic peptide A ISO associated with Streptococcal Infections;protein:increased expression:plasma RGD PMID:12654066 RGD:7248663 NCBI chr 1:10,608,025...10,610,287
Ensembl chr 1:11,825,072...11,827,373
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 severity ISO RGD PMID:19454727 RGD:5684011 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356
JBrowse link
G PDGFB platelet derived growth factor subunit B treatment ISO RGD PMID:11316849 RGD:10449490 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PDGFD platelet derived growth factor D ISO RGD PMID:21866094 RGD:9854633 NCBI chr11:98,852,652...99,110,147
Ensembl chr11:102,357,079...102,593,273
JBrowse link
G PLA2G7 phospholipase A2 group VII ISO RGD PMID:8730430 RGD:7248794 NCBI chr 6:46,264,262...46,318,487
Ensembl chr 6:47,558,861...47,590,212
JBrowse link
G PLCE1 phospholipase C epsilon 1 ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 NCBI chr10:90,731,695...91,065,846
Ensembl chr10:94,278,550...94,575,024
JBrowse link
G POMC proopiomelanocortin ISO CTD Direct Evidence: marker/mechanism CTD PMID:4368615 PMID:6300362 NCBI chr2A:25,161,668...25,165,600
Ensembl chr2A:25,258,768...25,262,706
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO CTD Direct Evidence: therapeutic CTD PMID:11318962 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
JBrowse link
G PRF1 perforin 1 ISO RGD PMID:17622272 RGD:6482824 NCBI chr10:67,071,141...67,078,057
Ensembl chr10:69,597,574...69,603,070
JBrowse link
G PTAFR platelet activating factor receptor treatment ISO RGD PMID:1668710 RGD:10041057 NCBI chr 1:27,405,880...27,436,184
Ensembl chr 1:28,447,833...28,448,861
JBrowse link
G PTK2B protein tyrosine kinase 2 beta ISO protein:increased expression:glomerulus RGD PMID:11774117 RGD:729912 NCBI chr 8:26,580,855...26,729,378
Ensembl chr 8:23,869,825...23,932,474
JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 ISO recombinant human SCGB1A1 in "experimental crescentic glomerulonephritis" model (mice) RGD PMID:18558621 RGD:6903251 NCBI chr11:57,774,560...57,780,334
Ensembl chr11:61,133,649...61,137,873
JBrowse link
G SERPINE1 serpin family E member 1 treatment ISO RGD PMID:12897205 RGD:13208810 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450
JBrowse link
G SMAD1 SMAD family member 1 ISO protein:increased phosphorylation:glomerulus RGD PMID:15591053 RGD:1643235 NCBI chr 4:137,822,269...137,899,700
Ensembl chr 4:149,481,836...149,558,135
JBrowse link
G SPP1 secreted phosphoprotein 1 disease_progression ISO RGD PMID:20720406 RGD:6903272 NCBI chr 4:80,263,711...80,271,466
Ensembl chr 4:90,988,200...90,995,935
JBrowse link
G TBXAS1 thromboxane A synthase 1 ISO RGD PMID:10560941 RGD:1601461 NCBI chr 7:131,772,947...131,958,647
Ensembl chr 7:144,255,211...144,439,523
JBrowse link
G TF transferrin severity ISO RGD PMID:22607047 RGD:7244194 NCBI chr 3:130,799,063...130,830,227
Ensembl chr 3:138,274,159...138,305,476
JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:16849506 RGD:7241071 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
G TLR4 toll like receptor 4 ISO RGD PMID:16849506 PMID:20844472 RGD:4144104 RGD:7241071 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
JBrowse link
G TNF tumor necrosis factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A treatment
disease_progression
ISO protein:increased expression:urine RGD PMID:20525973 PMID:23400706 RGD:7245516 RGD:7245540 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B treatment ISO RGD PMID:15841213 PMID:22449555 PMID:23400706 RGD:7245530 RGD:7245540 RGD:7245546 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646
JBrowse link
G TPO thyroid peroxidase ISO RGD PMID:8393543 RGD:7207483 NCBI chr2A:1,364,083...1,491,284
Ensembl chr2A:1,335,556...1,493,055
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 ISO protein:increased expression:kidney RGD PMID:18574676 RGD:7241215 NCBI chr 1:103,377,815...103,395,118
Ensembl chr 1:102,091,336...102,107,732
JBrowse link
G VEGFA vascular endothelial growth factor A treatment ISO RGD PMID:15195119 RGD:7421594 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
JBrowse link
G WT1 WT1 transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
anti-basement membrane glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO protein:increased expression:kidney, urine
mRNA, protein:increased expression:liver, plasma
RGD PMID:7550093 PMID:21282555 RGD:11039051 RGD:5129185 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO protein:increased expression:kidney RGD PMID:21282555 RGD:5129185 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380
JBrowse link
G BAX BCL2 associated X, apoptosis regulator ISO mRNA, protein:increased expression:kidney RGD PMID:12234300 RGD:1579984 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
JBrowse link
G BCL2 BCL2 apoptosis regulator ISO mRNA, protein:decreased expression:kidney RGD PMID:12234300 RGD:1579984 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G CCL17 C-C motif chemokine ligand 17 ISO mRNA:increased expression:glomerulus RGD PMID:20071465 RGD:4145614 NCBI chr16:37,678,518...37,689,350
Ensembl chr16:56,819,949...56,822,131
JBrowse link
G CCL2 C-C motif chemokine ligand 2 treatment ISO mRNA:increased expression:glomerulus RGD PMID:17898087 PMID:20071465 PMID:21894146 RGD:2307059 RGD:4145614 RGD:6218988 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CCL22 C-C motif chemokine ligand 22 ISO mRNA, protein:increased expression:glomerulus RGD PMID:12651599 RGD:2306306 NCBI chr16:37,631,861...37,640,208
Ensembl chr16:56,765,367...56,771,213
JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO mRNA:increased expression:glomerulus RGD PMID:17898087 RGD:2307059 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G CD274 CD274 molecule treatment ISO RGD PMID:21965585 RGD:7248671 NCBI chr 9:5,269,270...5,289,629
Ensembl chr 9:5,454,391...5,474,402
JBrowse link
G CD40 CD40 molecule ISO RGD PMID:15210767 RGD:7248442 NCBI chr20:42,455,711...42,467,139
Ensembl chr20:43,541,619...43,552,994
JBrowse link
G CD40LG CD40 ligand ISO RGD PMID:15458437 RGD:5508170 NCBI chr  X:125,776,138...125,788,820
Ensembl chr  X:136,042,849...136,058,202
JBrowse link
G CD80 CD80 molecule ISO RGD PMID:10712436 RGD:6902936 NCBI chr 3:116,646,590...116,683,725
Ensembl chr 3:123,559,559...123,594,870
JBrowse link
G CFB complement factor B ISO RGD PMID:22492944 RGD:7242700 NCBI chr 6:31,606,716...31,612,782 JBrowse link
G CLU clusterin ISO protein:increased expression:urine RGD PMID:23791361 RGD:9068422 NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523
JBrowse link
G CSF1 colony stimulating factor 1 treatment ISO RGD PMID:19242505 RGD:7257569 NCBI chr 1:112,555,755...112,575,894
Ensembl chr 1:127,764,916...127,781,943
JBrowse link
G CSF1R colony stimulating factor 1 receptor treatment
ameliorates
ISO RGD PMID:19242505 PMID:21519331 RGD:151665824 RGD:7257569 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415
JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 treatment ISO RGD PMID:8206086 PMID:10712436 RGD:11352257 RGD:6902936 NCBI chr2B:91,054,917...91,106,234
Ensembl chr2B:209,239,417...209,244,498
JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 ISO mRNA, protein:increased expression:glomerulus RGD PMID:19590241 RGD:4891946 NCBI chr16:37,646,447...37,659,078
Ensembl chr16:56,779,065...56,791,760
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISO mRNA, protein:increased expression:glomerulus RGD PMID:19590241 RGD:4891946 NCBI chr 3:39,158,346...39,176,604
Ensembl chr 3:39,440,955...39,457,219
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO mRNA:increased expression:glomerulus RGD PMID:17557270 RGD:2306579 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231
JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO mRNA:increased expression:glomerulus RGD PMID:8587253 RGD:633769 NCBI chr 5:168,121,536...168,124,671
Ensembl chr 5:175,032,803...175,035,960
JBrowse link
G FCGR3A Fc gamma receptor IIIa no_association ISO DNA:polymorphism:exon:(rs396991)(human)
DNA:cnv: :
RGD PMID:19640933 PMID:19946017 RGD:5508400 RGD:5508403 NCBI chr 1:137,027,943...137,036,738 JBrowse link
G GP6 glycoprotein VI platelet ISO RGD PMID:20651232 RGD:7242710 NCBI chr19:52,051,138...52,071,673
Ensembl chr19:60,746,578...60,770,643
JBrowse link
G IL10 interleukin 10 treatment ISO RGD PMID:23826305 RGD:7365004 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
JBrowse link
G IL17A interleukin 17A treatment ISO RGD PMID:23826305 RGD:7365004 NCBI chr 6:51,736,269...51,740,538
Ensembl chr 6:53,004,820...53,009,074
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:22046355 RGD:6893447 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IL1B interleukin 1 beta ISO mRNA, protein:increased expression:kidney
mRNA:increased expression:kidney (mouse)
RGD PMID:9198037 PMID:22046355 RGD:6893447 RGD:7401232 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G IL1RN interleukin 1 receptor antagonist ISO RGD PMID:20071465 RGD:4145614 NCBI chr2A:88,991,646...89,008,013
Ensembl chr2A:114,061,182...114,078,839
JBrowse link
G IL4 interleukin 4 ISO RGD PMID:9350645 PMID:17898087 RGD:2307059 RGD:2317673 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581
JBrowse link
G ITGA4 integrin subunit alpha 4 treatment ISO RGD PMID:7679412 PMID:9032136 RGD:2308810 RGD:9698425 NCBI chr2B:68,719,376...68,802,488
Ensembl chr2B:186,530,187...186,612,203
JBrowse link
G LOC100978961 lymphotactin ISO mRNA:increased expression:glomerulus RGD PMID:9717977 RGD:8693304 NCBI chr 1:143,837,578...144,068,261
Ensembl chr 1:147,785,654...147,790,587
JBrowse link
G LOC100995226 HLA class II histocompatibility antigen, DP beta 1 chain ISO RGD PMID:21569485 RGD:5147561 NCBI chr 6:32,648,780...32,659,613
Ensembl chr 6:33,763,566...33,774,387
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 ISO RGD PMID:21894146 RGD:6218988 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO RGD PMID:21894146 RGD:6218988 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MIF macrophage migration inhibitory factor ISO RGD PMID:10780884 RGD:1642011 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009
JBrowse link
G MMP12 matrix metallopeptidase 12 ISO RGD PMID:21894146 RGD:6218988 NCBI chr11:97,809,644...97,822,063
Ensembl chr11:101,294,475...101,306,762
JBrowse link
G MMP14 matrix metallopeptidase 14 ISO mRNA:increased expression:kidney, macrophage RGD PMID:10878552 RGD:2314954 NCBI chr14:3,654,125...3,665,158
Ensembl chr14:21,753,305...21,764,058
JBrowse link
G NOS2 nitric oxide synthase 2 ISO RGD PMID:21894146 RGD:6218988 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G NPPB natriuretic peptide B ISO RGD PMID:11729234 RGD:7248605 NCBI chr 1:10,621,416...10,622,960
Ensembl chr 1:11,838,518...11,839,995
JBrowse link
G PDCD1 programmed cell death 1 treatment ISO RGD PMID:21965585 RGD:7248671 NCBI chr12:130,849,353...130,858,776 JBrowse link
G PF4 platelet factor 4 treatment ISO RGD PMID:7573480 RGD:329901920 NCBI chr 4:50,208,806...50,210,570
Ensembl chr 4:56,041,833...56,043,750
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO RGD PMID:17888025 RGD:5563035 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G PTK2B protein tyrosine kinase 2 beta ISO protein:increased expression:glomerulus RGD PMID:11774117 RGD:729912 NCBI chr 8:26,580,855...26,729,378
Ensembl chr 8:23,869,825...23,932,474
JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 ISO protein:increased expression:renal glomerulus RGD PMID:18784646 RGD:11534983 NCBI chr 9:102,698,970...102,861,482
Ensembl chr 9:131,337,001...131,495,664
JBrowse link
G SELP selectin P ISO RGD PMID:21894146 RGD:6218988 NCBI chr 1:145,071,094...145,112,851
Ensembl chr 1:148,793,677...148,834,701
JBrowse link
G SLC34A1 solute carrier family 34 member 1 ISO protein:decreased expression:kidney, brush border membrane (mouse) RGD PMID:19193726 RGD:7242947 NCBI chr 5:172,685,862...172,700,440
Ensembl chr 5:179,748,492...179,762,975
JBrowse link
G SLIT2 slit guidance ligand 2 ISO mRNA:decreased expression:kidney, glomerulus RGD PMID:15215188 RGD:2316132 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
JBrowse link
G SPP1 secreted phosphoprotein 1 ISO RGD PMID:20504883 RGD:6903276 NCBI chr 4:80,263,711...80,271,466
Ensembl chr 4:90,988,200...90,995,935
JBrowse link
G SYK spleen associated tyrosine kinase ISO RGD PMID:21894146 RGD:6218988 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:21894146 RGD:6218988 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 ISO protein:increased expression:urine, serum: RGD PMID:23460853 RGD:7241232 NCBI chr 1:103,377,815...103,395,118
Ensembl chr 1:102,091,336...102,107,732
JBrowse link
C1q Deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QA complement C1q A chain ISO ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:7594474 PMID:8840296 PMID:9225968 PMID:9590289 PMID:21654842 More... NCBI chr 1:21,821,927...21,825,020 JBrowse link
G C1QB complement C1q B chain ISO ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:17513176 PMID:21654842 PMID:25741868 PMID:28492532 NCBI chr 1:21,838,514...21,846,855
Ensembl chr 1:22,786,685...22,797,581
JBrowse link
G C1QC complement C1q C chain ISO ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:7029321 PMID:7900940 PMID:8630118 PMID:20635792 PMID:21654842 More... NCBI chr 1:21,828,969...21,833,518
Ensembl chr 1:22,770,582...22,782,176
JBrowse link
C1q Deficiency 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QA complement C1q A chain ISO ClinVar Annotator: match by term: C1Q deficiency 1 OMIM
ClinVar
PMID:25741916 NCBI chr 1:21,821,927...21,825,020 JBrowse link
C1q Deficiency 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QB complement C1q B chain ISO ClinVar Annotator: match by term: C1Q deficiency 2 OMIM
ClinVar
PMID:2894352 PMID:24160257 PMID:25741868 NCBI chr 1:21,838,514...21,846,855
Ensembl chr 1:22,786,685...22,797,581
JBrowse link
C1q Deficiency 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QC complement C1q C chain ISO ClinVar Annotator: match by term: C1Q deficiency 3 OMIM
ClinVar
PMID:7029321 PMID:8630118 PMID:24157463 PMID:28492532 NCBI chr 1:21,828,969...21,833,518
Ensembl chr 1:22,770,582...22,782,176
JBrowse link
C3 Glomerulopathy 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H ISO ClinVar Annotator: match by term: C3 GLOMERULOPATHY 3 | ClinVar Annotator: match by term: CFH-Related Dense Deposit Disease / Membranoproliferative Glomerulonephritis Type II ClinVar PMID:8072530 PMID:9536098 PMID:11158219 PMID:11978762 PMID:12424708 More... NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CFHR5 complement factor H related 5 ISO ClinVar Annotator: match by term: C3 GLOMERULOPATHY 3 | ClinVar Annotator: match by term: CFH-Related Dense Deposit Disease / Membranoproliferative Glomerulonephritis Type II | ClinVar Annotator: match by term: CFHR5 deficiency OMIM
ClinVar
PMID:16299065 PMID:17000000 PMID:19365580 PMID:20513133 PMID:20800271 More... NCBI chr 1:172,541,948...172,574,591
Ensembl chr 1:176,876,635...176,908,723
JBrowse link
Chronic Mesangial Proliferative Glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CX3CL1 C-X3-C motif chemokine ligand 1 ISO RGD PMID:12028445 RGD:9491783 NCBI chr16:37,646,447...37,659,078
Ensembl chr16:56,779,065...56,791,760
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISO RGD PMID:12028445 RGD:9491783 NCBI chr 3:39,158,346...39,176,604
Ensembl chr 3:39,440,955...39,457,219
JBrowse link
crescentic glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL2 C-C motif chemokine ligand 2 treatment ISO RGD PMID:8903512 PMID:17314328 RGD:8549743 RGD:8549770 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CD40 CD40 molecule ISO RGD PMID:14569091 RGD:7248599 NCBI chr20:42,455,711...42,467,139
Ensembl chr20:43,541,619...43,552,994
JBrowse link
G CD40LG CD40 ligand treatment ISO RGD PMID:14569091 RGD:7248599 NCBI chr  X:125,776,138...125,788,820
Ensembl chr  X:136,042,849...136,058,202
JBrowse link
G CSF1R colony stimulating factor 1 receptor treatment ISO RGD PMID:23408165 RGD:151665815 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:19959716 RGD:7175502 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G IL1RN interleukin 1 receptor antagonist treatment ISO human protein in a rat model RGD PMID:7637259 RGD:8551712 NCBI chr2A:88,991,646...89,008,013
Ensembl chr2A:114,061,182...114,078,839
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:18443593 RGD:2293336 NCBI chr19:17,755,331...17,757,164 JBrowse link
G LOC100991644 low affinity immunoglobulin gamma Fc region receptor II-a ISO DNA:CNV:3'UTR: RGD PMID:16482158 RGD:2293335 NCBI chr 1:136,892,311...136,906,450 JBrowse link
G MMP12 matrix metallopeptidase 12 ISO RGD PMID:12626598 PMID:20488952 RGD:2325762 RGD:737630 NCBI chr11:97,809,644...97,822,063
Ensembl chr11:101,294,475...101,306,762
JBrowse link
G MMP3 matrix metallopeptidase 3 ISO RGD PMID:11095647 RGD:7241255 NCBI chr11:97,776,729...97,784,549
Ensembl chr11:101,267,566...101,275,354
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO protein:increased expression:renal cortex (rat) RGD PMID:16046515 RGD:2313720 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21403644 RGD:7245940 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G STAT6 signal transducer and activator of transcription 6 ISO RGD PMID:21985369 RGD:7243976 Ensembl chr12:32,068,679...32,085,099 JBrowse link
focal segmental glomerulosclerosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16723697 NCBI chr  X:8,189,267...8,229,415
Ensembl chr  X:15,470,896...15,510,891
JBrowse link
G ACTA2 actin alpha 2, smooth muscle ISO CTD Direct Evidence: marker/mechanism CTD PMID:20493835 NCBI chr10:85,660,983...85,678,729
Ensembl chr10:89,164,344...89,182,080
JBrowse link
G ACTN4 actinin alpha 4 susceptibility ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal RGD
ClinVar
PMID:10700177 PMID:16251236 PMID:18594871 PMID:19142020 PMID:19956976 More... RGD:1598731 NCBI chr19:35,742,758...35,825,321
Ensembl chr19:44,313,569...44,395,508
JBrowse link
G ACTR3 actin related protein 3 ISO protein:increased expression:renal glomerulus (rat)
DNA:missense mutation:cds:p.L111F (rat)
RGD PMID:18064521 PMID:27251563 RGD:11575049 RGD:2292230 NCBI chr2B:827,184...900,424
Ensembl chr2B:114,373,392...114,445,729
JBrowse link
G AGT angiotensinogen ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:19858406 PMID:21357516 RGD:5129175 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO protein:increased expression:kidney cortex RGD PMID:21357516 RGD:5129175 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO protein:increased expression:kidney cortex RGD PMID:21357516 RGD:5129175 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G ANGPT2 angiopoietin 2 ISO mRNA, protein:increased expression:glomerulus (rat) RGD PMID:16628643 RGD:2314213 NCBI chr 8:718,367...782,534
Ensembl chr 8:6,506,014...6,566,915
JBrowse link
G ANLN anillin, actin binding protein ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 7:37,011,518...37,075,349
Ensembl chr 7:37,243,917...37,304,137
JBrowse link
G ARHGAP24 Rho GTPase activating protein 24 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar NCBI chr 4:77,788,074...78,316,357
Ensembl chr 4:88,619,296...89,045,861
JBrowse link
G AXDND1 axonemal dynein light chain domain containing 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:8589695 PMID:10742096 PMID:11805166 PMID:15253708 PMID:15327385 More... NCBI chr 1:154,847,978...155,043,339
Ensembl chr 1:158,536,967...158,724,251
JBrowse link
G BDKRB1 bradykinin receptor B1 ISO RGD PMID:21412216 RGD:7175321 NCBI chr14:76,885,923...76,894,456 JBrowse link
G C2 complement C2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chr 6:31,590,135...31,606,368 JBrowse link
G C3 complement C3 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:1976733 PMID:7870343 PMID:16687714 PMID:17634448 PMID:17767156 More... NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
JBrowse link
G CASP9 caspase 9 treatment ISO RGD PMID:28245472 RGD:13782344 NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266
JBrowse link
G CAT catalase ISO RGD PMID:22443450 RGD:7205647 NCBI chr11:34,413,253...34,446,831
Ensembl chr11:34,289,603...34,323,160
JBrowse link
G CCN2 cellular communication network factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17121042 NCBI chr 6:129,729,572...129,733,113
Ensembl chr 6:133,836,319...133,842,077
JBrowse link
G CD2AP CD2 associated protein ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 6:47,065,284...47,210,746
Ensembl chr 6:48,328,863...48,474,163
JBrowse link
G CFB complement factor B ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chr 6:31,606,716...31,612,782 JBrowse link
G CFH complement factor H ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:8072530 PMID:15870199 PMID:16299065 PMID:17089378 PMID:17947292 More... NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CFI complement factor I ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:18825487 PMID:25741868 PMID:28492532 NCBI chr 4:102,236,868...102,311,359
Ensembl chr 4:112,804,645...112,865,581
JBrowse link
G CMAS cytidine monophosphate N-acetylneuraminic acid synthetase ISO MouseDO NCBI chr12:64,234,241...64,253,306
Ensembl chr12:66,838,670...66,857,774
JBrowse link
G COL4A1 collagen type IV alpha 1 chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 PMID:18682491 NCBI chr13:91,282,617...91,440,187
Ensembl chr13:110,407,009...110,562,529
JBrowse link
G COL4A3 collagen type IV alpha 3 chain ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:14871398 PMID:17216251 PMID:18385178 PMID:24033266 PMID:24854265 More... NCBI chr2B:114,410,703...114,559,336
Ensembl chr2B:233,294,783...233,371,021
JBrowse link
G COL4A4 collagen type IV alpha 4 chain ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:12028435 PMID:15618242 PMID:17396119 PMID:19129241 PMID:20029656 More... NCBI chr2B:114,227,135...114,410,564
Ensembl chr2B:233,065,678...233,205,892
JBrowse link
G COL4A5 collagen type IV alpha 5 chain ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:8648925 PMID:9195222 PMID:10561141 PMID:10752524 PMID:14514738 More... NCBI chr  X:97,538,978...97,797,019
Ensembl chr  X:108,008,689...108,166,095
JBrowse link
G COQ2 coenzyme Q2, polyprenyltransferase ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr 4:40,913,015...40,934,594
Ensembl chr 4:46,762,659...46,784,014
JBrowse link
G COQ8B coenzyme Q8B ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar NCBI chr19:37,735,725...37,761,160
Ensembl chr19:46,242,576...46,267,503
JBrowse link
G CRB2 crumbs cell polarity complex component 2 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 9:94,473,423...94,511,285
Ensembl chr 9:123,011,968...123,032,855
JBrowse link
G EDN1 endothelin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:10991693 PMID:24033266 PMID:25741868 PMID:31049720 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
JBrowse link
G FN1 fibronectin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chr2B:102,623,568...102,698,747
Ensembl chr2B:221,208,431...221,284,003
JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19225054 NCBI chr 5:152,429,337...152,459,800
Ensembl chr 5:158,413,073...158,442,481
JBrowse link
G HR HR lysine demethylase and nuclear receptor corepressor ISO RGD PMID:21325752 RGD:150520024 NCBI chr 8:21,359,348...21,378,315
Ensembl chr 8:18,298,709...18,316,151
JBrowse link
G HSPB1 heat shock protein family B (small) member 1 ISO protein:increased expression:glomerulus, podocyte: RGD PMID:21931298 RGD:10402764 NCBI chr 7:67,716,021...67,717,762
Ensembl chr 7:82,751,523...82,752,984
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:21412216 RGD:7175321 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G INF2 inverted formin 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:21866090 PMID:25741868 PMID:26467025 PMID:28492532 PMID:30655312 More... NCBI chr14:85,339,478...85,366,336
Ensembl chr14:105,145,779...105,163,154
JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:21804539 RGD:6907385 NCBI chr17:10,134,450...10,194,596
Ensembl chr17:10,353,111...10,392,382
JBrowse link
G KIRREL2 kirre like nephrin family adhesion molecule 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:19406966 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr19:32,769,592...32,785,045
Ensembl chr19:41,518,306...41,533,467
JBrowse link
G LAMB2 laminin subunit beta 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:20556798 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074
JBrowse link
G LIPC lipase C, hepatic type ISO protein:reduced expression:serum (rat) RGD PMID:14531811 RGD:2308781 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 9:97,730,850...97,820,554
Ensembl chr 9:126,240,722...126,322,420
JBrowse link
G LOC100978865 nuclear RNA export factor 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:23686279 NCBI chr  X:91,029,232...91,040,710 JBrowse link
G LOC100986730 guanine nucleotide-binding protein G(q) subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:16267159 NCBI chr 9:46,816,409...47,129,116
Ensembl chr 9:76,575,815...76,773,849
JBrowse link
G LPL lipoprotein lipase ISO RGD PMID:14531811 RGD:2308781 NCBI chr 8:19,164,541...19,193,100
Ensembl chr 8:16,113,415...16,142,966
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO mRNA, protein:increased expression, increased activity:kidney RGD PMID:19357873 RGD:2325738 NCBI chr16:35,711,866...35,738,881
Ensembl chr16:54,812,694...54,844,279
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO mRNA, protein:increased expression, increased activity:kidney RGD PMID:19357873 RGD:2325738 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G MPV17 mitochondrial inner membrane protein MPV17 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18818194 NCBI chr2A:27,311,551...27,325,249
Ensembl chr2A:27,399,258...27,414,090
JBrowse link
G MYH10 myosin heavy chain 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9678433 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192
JBrowse link
G MYH9 myosin heavy chain 9 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:19557653 PMID:23144074 PMID:24033266 PMID:25741868 PMID:26346198 More... NCBI chr22:17,200,623...17,305,826
Ensembl chr22:35,039,101...35,121,618
JBrowse link
G MYO1E myosin IE ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr15:38,106,599...38,343,040
Ensembl chr15:56,413,570...56,649,722
JBrowse link
G MYO9A myosin IXA ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:33412162 NCBI chr15:50,771,747...51,069,700
Ensembl chr15:69,541,318...69,760,771
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:12522564 PMID:17509468 PMID:18263599 PMID:18311798 PMID:19319132 More... NCBI chr 1:223,052,307...223,084,736
Ensembl chr 1:228,505,147...228,537,216
JBrowse link
G NOC3L NOC3 like DNA replication regulator ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chr10:91,052,341...91,101,068
Ensembl chr10:94,579,840...94,609,405
JBrowse link
G NOS2 nitric oxide synthase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G NPHP1 nephrocystin 1 ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 NCBI chr2A:91,520,612...91,602,187
Ensembl chr2A:111,625,267...111,706,205
JBrowse link
G NPHP3 nephrocystin 3 ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:129,753,399...129,795,300 JBrowse link
G NPHP4 nephrocystin 4 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 1:4,620,593...4,756,363
Ensembl chr 1:5,878,739...6,012,864
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin disease_progression ISO mRNA:increased expression:urine (human)
protein:decreased expression:kidney,renal glomerulus (human)
RGD PMID:21414970 PMID:30900988 RGD:15023481 RGD:38549367 NCBI chr19:32,742,802...32,770,600
Ensembl chr19:41,492,444...41,518,471
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:1523708 PMID:8589695 PMID:10742096 PMID:11805166 PMID:11805168 More... NCBI chr 1:155,038,753...155,064,332 JBrowse link
G NUP93 nucleoporin 93 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:32581362 NCBI chr16:37,007,481...37,122,785
Ensembl chr16:56,140,546...56,255,561
JBrowse link
G PAX2 paired box 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PCNA proliferating cell nuclear antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:17121042 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440
JBrowse link
G PDSS2 decaprenyl diphosphate synthase subunit 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 6:104,963,942...105,272,807
Ensembl chr 6:108,833,223...109,137,055
JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 ISO RGD PMID:19350281 RGD:8693412 NCBI chr15:47,006,718...47,141,035
Ensembl chr15:65,276,530...65,410,105
JBrowse link
G PLCE1 phospholipase C epsilon 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:18975016 PMID:20507940 PMID:25060053 PMID:25741868 PMID:26467025 More... NCBI chr10:90,731,695...91,065,846
Ensembl chr10:94,278,550...94,575,024
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha ISO RGD PMID:26436650 RGD:13515117 NCBI chr 4:93,447,095...93,770,339
Ensembl chr 4:104,113,520...104,435,394
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta ISO RGD PMID:26436650 RGD:13515117 NCBI chr10:69,984,241...70,043,352
Ensembl chr10:72,443,051...72,501,752
JBrowse link
G PSAP prosaposin ISO ClinVar Annotator: match by term: Hyalinosis, Segmental Glomerular ClinVar PMID:24033266 PMID:25741868 PMID:28492532 PMID:30976395 PMID:35456468 NCBI chr10:68,286,359...68,321,349
Ensembl chr10:70,810,881...70,828,781
JBrowse link
G RAP1GAP RAP1 GTPase activating protein ISO mRNA:increased expression:renal glomerulus (human) RGD PMID:24642466 RGD:9835343 NCBI chr 1:20,790,076...20,860,511
Ensembl chr 1:21,754,733...21,824,405
JBrowse link
G RPGRIP1L RPGRIP1 like ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:19430481 PMID:20301500 PMID:25741868 PMID:28492532 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174
JBrowse link
G SCARB2 scavenger receptor class B member 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25088547 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 4:47,992,589...48,047,528
Ensembl chr 4:53,830,488...53,886,059
JBrowse link
G SDCCAG8 SHH signaling and ciliogenesis regulator SDCCAG8 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chr 1:218,856,571...219,107,855
Ensembl chr 1:224,239,009...224,481,132
JBrowse link
G SERPINE1 serpin family E member 1 treatment ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:18682491 PMID:22303720 RGD:13208548 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450
JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:24744439 RGD:12859042 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SLC17A5 solute carrier family 17 member 5 ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 PMID:29140481 NCBI chr 6:71,404,354...71,477,511
Ensembl chr 6:74,702,447...74,760,557
JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:11799392 PMID:15880370 PMID:16840568 PMID:17089404 PMID:18805831 More... NCBI chr2B:103,672,934...103,743,802
Ensembl chr2B:222,276,353...222,347,258
JBrowse link
G SPP1 secreted phosphoprotein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9294829 NCBI chr 4:80,263,711...80,271,466
Ensembl chr 4:90,988,200...90,995,935
JBrowse link
G SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 ISO MouseDO NCBI chr12:24,760,093...25,066,794
Ensembl chr12:25,262,893...25,564,180
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 PMID:18682491 PMID:20493835 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TMEM63C transmembrane protein 63C ISO protein:decreased expression:kidney,renal glomerulus (human) RGD PMID:30900988 RGD:15023481 NCBI chr14:57,734,857...57,812,529
Ensembl chr14:76,974,416...77,011,555
JBrowse link
G TNF tumor necrosis factor ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFAIP2 TNF alpha induced protein 2 ISO MouseDO NCBI chr14:83,745,176...83,759,157
Ensembl chr14:103,561,181...103,570,309
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646
JBrowse link
G TRPC6 transient receptor potential cation channel subfamily C member 6 treatment ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
DNA:SNP:exon:p.P15S (human)
RGD
ClinVar
PMID:19936226 PMID:21839714 PMID:22980509 PMID:23385000 PMID:25019165 More... RGD:7247440 RGD:7247444 RGD:7247445 NCBI chr11:96,414,498...96,551,670
Ensembl chr11:99,919,410...100,050,685
JBrowse link
G VLDLR very low density lipoprotein receptor ISO protein:decreased expression:adipose tissue, skeletal muscle (rat) RGD PMID:11786096 RGD:2324671 NCBI chr 9:2,428,639...2,463,796
Ensembl chr 9:2,621,199...2,653,980
JBrowse link
G VWF von Willebrand factor ISO RGD PMID:22295953 RGD:7207031 NCBI chr12:6,073,836...6,249,806
Ensembl chr12:5,990,612...6,165,153
JBrowse link
G WT1 WT1 transcription factor ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:7795587 PMID:8388765 PMID:9108089 PMID:9531607 PMID:10571943 More... NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17152860 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747
JBrowse link
focal segmental glomerulosclerosis 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme treatment ISO RGD PMID:8505110 RGD:12880006 NCBI chr17:57,556,294...57,577,294
Ensembl chr17:62,702,341...62,733,853
JBrowse link
G ACTN4 actinin alpha 4 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 OMIM
ClinVar
PMID:10700177 PMID:16251236 PMID:18594871 PMID:19142020 PMID:19956976 More... NCBI chr19:35,742,758...35,825,321
Ensembl chr19:44,313,569...44,395,508
JBrowse link
G ARHGAP24 Rho GTPase activating protein 24 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 ClinVar NCBI chr 4:77,788,074...78,316,357
Ensembl chr 4:88,619,296...89,045,861
JBrowse link
G C2 complement C2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chr 6:31,590,135...31,606,368 JBrowse link
G C3 complement C3 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:1976733 PMID:17634448 PMID:18325906 PMID:19168221 PMID:25741868 More... NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
JBrowse link
G CFB complement factor B ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chr 6:31,606,716...31,612,782 JBrowse link
G CFI complement factor I ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:18825487 PMID:25741868 PMID:28492532 NCBI chr 4:102,236,868...102,311,359
Ensembl chr 4:112,804,645...112,865,581
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:10991693 PMID:24033266 PMID:25741868 PMID:31049720 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
JBrowse link
G LAMB2 laminin subunit beta 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:20556798 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074
JBrowse link
G MYH9 myosin heavy chain 9 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:19557653 PMID:23144074 PMID:24033266 PMID:25741868 PMID:26346198 More... NCBI chr22:17,200,623...17,305,826
Ensembl chr22:35,039,101...35,121,618
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:12522564 PMID:17509468 PMID:18263599 PMID:18311798 PMID:19319132 More... NCBI chr 1:223,052,307...223,084,736
Ensembl chr 1:228,505,147...228,537,216
JBrowse link
G NPHP1 nephrocystin 1 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr2A:91,520,612...91,602,187
Ensembl chr2A:111,625,267...111,706,205
JBrowse link
G NPHP3 nephrocystin 3 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:129,753,399...129,795,300 JBrowse link
G NUP107 nucleoporin 107 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 ClinVar NCBI chr12:66,198,838...66,254,505
Ensembl chr12:68,981,409...69,035,642
JBrowse link
G PAX2 paired box 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PLCE1 phospholipase C epsilon 1 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr10:90,731,695...91,065,846
Ensembl chr10:94,278,550...94,575,024
JBrowse link
G RPGRIP1L RPGRIP1 like ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:19430481 PMID:20301500 PMID:25741868 PMID:28492532 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174
JBrowse link
G SCARB2 scavenger receptor class B member 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 4:47,992,589...48,047,528
Ensembl chr 4:53,830,488...53,886,059
JBrowse link
G SLC17A5 solute carrier family 17 member 5 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 PMID:29140481 NCBI chr 6:71,404,354...71,477,511
Ensembl chr 6:74,702,447...74,760,557
JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:11799392 PMID:15880370 PMID:16840568 PMID:17089404 PMID:18805831 More... NCBI chr2B:103,672,934...103,743,802
Ensembl chr2B:222,276,353...222,347,258
JBrowse link
G TRPC6 transient receptor potential cation channel subfamily C member 6 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr11:96,414,498...96,551,670
Ensembl chr11:99,919,410...100,050,685
JBrowse link
focal segmental glomerulosclerosis 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPC6 transient receptor potential cation channel subfamily C member 6 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 2 | ClinVar Annotator: match by term: TRPC6-related condition OMIM
ClinVar
PMID:2298509 PMID:10200986 PMID:15879175 PMID:15924139 PMID:16932363 More... NCBI chr11:96,414,498...96,551,670
Ensembl chr11:99,919,410...100,050,685
JBrowse link
focal segmental glomerulosclerosis 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD2AP CD2 associated protein ISO ClinVar Annotator: match by term: CD2AP-related condition | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 3, susceptibility to OMIM
ClinVar
PMID:10514378 PMID:12764198 PMID:17713465 PMID:18443213 PMID:19131354 More... NCBI chr 6:47,065,284...47,210,746
Ensembl chr 6:48,328,863...48,474,163
JBrowse link
focal segmental glomerulosclerosis 5 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 Ensembl chr14:105,169,769...105,190,333 JBrowse link
G AHNAK2 AHNAK nucleoprotein 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,587,016...85,627,319 JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756
JBrowse link
G BRF1 BRF1 RNA polymerase III transcription initiation factor subunit ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,851,908...85,950,489
Ensembl chr14:105,635,757...105,714,465
JBrowse link
G BTBD6 BTB domain containing 6 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,883,988...85,886,491 JBrowse link
G CDCA4 cell division cycle associated 4 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,659,022...85,670,182
Ensembl chr14:105,444,672...105,445,397
JBrowse link
G CEP170B centrosomal protein 170B ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,515,684...85,548,410
Ensembl chr14:105,307,591...105,332,523
JBrowse link
G CLBA1 clathrin binding box of aftiphilin containing 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,634,349...85,649,411
Ensembl chr14:105,419,834...105,441,870
JBrowse link
G GPR132 G protein-coupled receptor 132 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,697,589...85,716,764 JBrowse link
G INF2 inverted formin 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 | ClinVar Annotator: match by term: INF2-related condition OMIM
ClinVar
PMID:6054293 PMID:9536098 PMID:16199547 PMID:17576681 PMID:20023659 More... NCBI chr14:85,339,478...85,366,336
Ensembl chr14:105,145,779...105,163,154
JBrowse link
G JAG2 jagged canonical Notch ligand 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,785,586...85,812,056
Ensembl chr14:105,569,837...105,585,878
JBrowse link
G NUDT14 nudix hydrolase 14 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,816,561...85,824,887
Ensembl chr14:105,600,783...105,605,538
JBrowse link
G PACS2 phosphofurin acidic cluster sorting protein 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,935,807...86,035,935
Ensembl chr14:105,737,878...105,810,349
JBrowse link
G PLD4 phospholipase D family member 4 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,574,724...85,587,176
Ensembl chr14:105,360,584...105,369,247
JBrowse link
G SIVA1 SIVA1 apoptosis inducing factor ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,404,148...85,408,254
Ensembl chr14:105,196,118...105,202,678
JBrowse link
G ZBTB42 zinc finger and BTB domain containing 42 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:85,449,536...85,453,692
Ensembl chr14:105,243,998...105,245,266
JBrowse link
focal segmental glomerulosclerosis 6 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHAL6B lactate dehydrogenase A like 6B ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 6 ClinVar PMID:25741868 NCBI chr15:38,176,451...38,179,189
Ensembl chr15:56,484,343...56,485,488
JBrowse link
G MYO1E myosin IE ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 6 | ClinVar Annotator: match by term: MYO1E-related condition OMIM
ClinVar
PMID:9536098 PMID:17576681 PMID:21756023 PMID:25741868 PMID:28492532 More... NCBI chr15:38,106,599...38,343,040
Ensembl chr15:56,413,570...56,649,722
JBrowse link
focal segmental glomerulosclerosis 7 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 7 OMIM
ClinVar
PMID:3377002 PMID:8589702 PMID:9106533 PMID:10466411 PMID:10533062 More... NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
focal segmental glomerulosclerosis 8 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANLN anillin, actin binding protein ISO ClinVar Annotator: match by term: ANLN-related condition | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 8 OMIM
ClinVar
PMID:24676636 PMID:25741868 PMID:28492532 PMID:29869118 NCBI chr 7:37,011,518...37,075,349
Ensembl chr 7:37,243,917...37,304,137
JBrowse link
G SYNPO synaptopodin ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 8 ClinVar PMID:25741916 PMID:33615071 NCBI chr 5:146,048,956...146,083,490
Ensembl chr 5:152,046,207...152,085,595
JBrowse link
focal segmental glomerulosclerosis 9 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB2 crumbs cell polarity complex component 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 9 OMIM
ClinVar
PMID:25557779 PMID:25741868 PMID:27004616 PMID:27942854 PMID:28492532 More... NCBI chr 9:94,473,423...94,511,285
Ensembl chr 9:123,011,968...123,032,855
JBrowse link
Focal Segmental Glomerulosclerosis and Neurodevelopmental Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRIM8 tripartite motif containing 8 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis and neurodevelopmental syndrome | ClinVar Annotator: match by term: TRIM8-related condition OMIM
ClinVar
PMID:25741868 PMID:27346735 PMID:28492532 PMID:29758562 PMID:30244534 More... NCBI chr10:99,242,187...99,256,342
Ensembl chr10:102,707,199...102,720,565
JBrowse link
Glomerulonephritis with Isolated C3 Deposits and Factor H Deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H ISO DNA:SNPs,Haplotype:: RGD PMID:17517971 RGD:7364995 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
Glomerulopathy with Giant Fibrillar Deposits term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 PMID:28492532 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360
JBrowse link
G FN1 fibronectin 1 ISO ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 OMIM
ClinVar
PMID:1544672 PMID:7747733 PMID:9536098 PMID:12042895 PMID:17576681 More... NCBI chr2B:102,623,568...102,698,747
Ensembl chr2B:221,208,431...221,284,003
JBrowse link
G INF2 inverted formin 2 ISO ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 NCBI chr14:85,339,478...85,366,336
Ensembl chr14:105,145,779...105,163,154
JBrowse link
glomerulosclerosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme treatment ISO RGD PMID:21718676 RGD:12879389 NCBI chr17:57,556,294...57,577,294
Ensembl chr17:62,702,341...62,733,853
JBrowse link
G AGER advanced glycosylation end-product specific receptor treatment ISO associated with Diabetic Nephropathies RGD PMID:20554645 PMID:23046363 RGD:7243247 RGD:7244139 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO mRNA:decreased expression:kidney RGD PMID:12495295 RGD:6903859 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO mRNA:increased expression:kidney
associated with Kidney Failure, Chronic
RGD PMID:12495295 PMID:20042458 PMID:20631980 RGD:6903284 RGD:6903859 RGD:6903882 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G APOE apolipoprotein E ISO protein:increased expression:renal glomerulus (rat) RGD PMID:21907828 PMID:22207560 RGD:6903199 RGD:6903285 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G COL3A1 collagen type III alpha 1 chain ISO RGD PMID:20610530 RGD:7257557 NCBI chr2B:76,285,115...76,322,703
Ensembl chr2B:194,204,613...194,242,956
JBrowse link
G ESR2 estrogen receptor 2 susceptibility ISO protein:decreased expression:renal glomerulus (mouse) RGD PMID:12000739 RGD:7364801 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303
JBrowse link
G FBN1 fibrillin 1 ISO associated with Hypertension RGD PMID:16380460 RGD:7365080 NCBI chr15:27,358,780...27,593,539
Ensembl chr15:45,682,450...45,918,111
JBrowse link
G HBEGF heparin binding EGF like growth factor induced ISO RGD PMID:16107576 RGD:1556472 NCBI chr 5:135,699,553...135,713,366
Ensembl chr 5:141,816,402...141,830,531
JBrowse link
G IL1B interleukin 1 beta ISO associated with Hypertension RGD PMID:19948880 RGD:7175503 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO protein:decreased expression:kidney (rat)
associated with Hyperhomocysteinemia
RGD PMID:20406136 PMID:21275176 RGD:7207203 RGD:7207363 NCBI chr11:97,730,545...97,739,190
Ensembl chr11:101,221,393...101,230,104
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO associated with Hyperhomocysteinemia
associated with Obesity;mRNA:decreased expression:glomerulus
RGD PMID:9300240 PMID:20406136 RGD:7207203 RGD:8547929 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin treatment ISO RGD PMID:22125642 RGD:40902998 NCBI chr19:32,742,802...32,770,600
Ensembl chr19:41,492,444...41,518,471
JBrowse link
G PLA2G7 phospholipase A2 group VII ISO RGD PMID:16213192 RGD:7248790 NCBI chr 6:46,264,262...46,318,487
Ensembl chr 6:47,558,861...47,590,212
JBrowse link
G PLEKHA7 pleckstrin homology domain containing A7 ameliorates ISO compared to wild type RGD PMID:25136115 RGD:11079199 NCBI chr11:16,861,464...17,095,610
Ensembl chr11:16,555,368...16,647,075
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma treatment ISO RGD PMID:11318962 RGD:8553043 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
JBrowse link
G RGS2 regulator of G protein signaling 2 susceptibility ISO associated with Hypertension RGD PMID:26606876 RGD:13524570 NCBI chr 1:168,273,112...168,276,348
Ensembl chr 1:172,566,701...172,569,955
JBrowse link
G RNLS renalase, FAD dependent amine oxidase ISO RGD PMID:24022426 RGD:7327155 NCBI chr10:84,996,999...85,304,240
Ensembl chr10:88,503,683...88,808,990
JBrowse link
G SERPINE1 serpin family E member 1 treatment ISO mRNA, protein:increased expression:kidney (rat) RGD PMID:26999660 PMID:27129290 RGD:11073618 RGD:11073688 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450
JBrowse link
G SHC1 SHC adaptor protein 1 ameliorates ISO RGD PMID:27270176 RGD:12792230 NCBI chr 1:130,310,778...130,323,001
Ensembl chr 1:133,920,532...133,929,008
JBrowse link
G SLC2A1 solute carrier family 2 member 1 ISO RGD PMID:19918242 RGD:12879501 NCBI chr 1:42,224,273...42,257,184
Ensembl chr 1:43,600,733...43,634,143
JBrowse link
G SPP1 secreted phosphoprotein 1 ISO RGD PMID:12675855 RGD:6903837 NCBI chr 4:80,263,711...80,271,466
Ensembl chr 4:90,988,200...90,995,935
JBrowse link
G SYNPO synaptopodin treatment ISO RGD PMID:22125642 RGD:40902998 NCBI chr 5:146,048,956...146,083,490
Ensembl chr 5:152,046,207...152,085,595
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B ISO associated with Hypertension RGD PMID:23389459 RGD:7245475 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646
JBrowse link
hypotrichosis-lymphedema-telangiectasia-renal defect syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX18 SRY-box transcription factor 18 ISO ClinVar Annotator: match by term: Hypotrichosis-lymphedema-telangiectasia-renal defect syndrome OMIM
ClinVar
PMID:2484451 PMID:12740761 PMID:24697860 PMID:25741868 PMID:28492532 More...
IgA glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme disease_progression ISO DNA:polymorphism:intron:
ClinVar Annotator: match by term: Susceptibility to progression to renal failure in IgA nephropathy
RGD
ClinVar
PMID:1313972 PMID:1319114 PMID:1328889 PMID:1386652 PMID:1976655 More... RGD:7257515 NCBI chr17:57,556,294...57,577,294
Ensembl chr17:62,702,341...62,733,853
JBrowse link
G ACSM3 acyl-CoA synthetase medium chain family member 3 disease_progression ISO DNA:polymorphism: : RGD PMID:12484505 RGD:7241283 NCBI chr16:17,611,715...17,644,587
Ensembl chr16:20,796,425...20,829,315
JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32715474 NCBI chr15:37,562,930...37,717,175
Ensembl chr15:55,873,606...56,027,188
JBrowse link
G ADD1 adducin 1 disease_progression ISO DNA:polymorphism:cds:rs4961(human) RGD PMID:19838659 RGD:7174725 NCBI chr 4:2,986,301...3,072,590
Ensembl chr 4:2,920,781...2,975,012
JBrowse link
G ADD2 adducin 2 disease_progression ISO DNA:polymorphism:cds: rs4984(human) RGD PMID:19838659 RGD:7174725 NCBI chr2A:70,724,454...70,831,248
Ensembl chr2A:71,839,470...71,895,106
JBrowse link
G AGT angiotensinogen ISO ClinVar Annotator: match by term: Susceptibility to progression to renal failure in IgA nephropathy ClinVar PMID:1394429 PMID:7649545 PMID:7883995 PMID:8348146 PMID:8513325 More... NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO protein:increased expression:kidney tubule RGD PMID:15930094 RGD:6903851 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380
JBrowse link
G AGTR2 angiotensin II receptor type 2 disease_progression ISO DNA:polymorphism: :1818A>T (human)
protein:increased expression:kidney tubule
RGD PMID:15930094 PMID:19194560 RGD:6903844 RGD:6903851 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G AURKB aurora kinase B ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr17:43,447,661...43,453,864
Ensembl chr17:48,180,066...48,186,129
JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 ISO OMIM:161950 | OMIM:616818 MouseDO NCBI chr 9:32,889,124...32,945,759
Ensembl chr 9:33,691,733...33,754,192
JBrowse link
G C1QA complement C1q A chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:8840296 PMID:25133636 NCBI chr 1:21,821,927...21,825,020 JBrowse link
G C1QB complement C1q B chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 1:21,838,514...21,846,855
Ensembl chr 1:22,786,685...22,797,581
JBrowse link
G C2 complement C2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 6:31,590,135...31,606,368 JBrowse link
G C3 complement C3 ISO mRNA,protein:increased expression, increased activity:kidney RGD PMID:11287758 RGD:7175543 NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
JBrowse link
G CARD9 caspase recruitment domain family member 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25305756 NCBI chr 9:107,432,709...107,446,271
Ensembl chr 9:136,416,279...136,424,756
JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO protein:increased expression:kidney RGD PMID:18433541 RGD:2307041 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CCL20 C-C motif chemokine ligand 20 disease_progression ISO RGD PMID:23192593 RGD:7483632 NCBI chr2B:115,052,768...115,056,479
Ensembl chr2B:233,862,505...233,866,225
JBrowse link
G CCR6 C-C motif chemokine receptor 6 disease_progression ISO RGD PMID:23192593 RGD:7483632 NCBI chr 6:165,094,563...165,109,774
Ensembl chr 6:170,069,689...170,084,779
JBrowse link
G CD14 CD14 molecule disease_progression ISO DNA:polymorphism:promoter:c. -159C>T (human) RGD PMID:12566518 RGD:7204499 NCBI chr 5:135,996,265...135,997,909
Ensembl chr 5:142,113,082...142,118,966
JBrowse link
G CD163 CD163 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr12:7,616,714...7,649,768
Ensembl chr12:7,775,343...7,810,023
JBrowse link
G CD44 CD44 molecule (IN blood group) ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009
JBrowse link
G CFB complement factor B disease_progression ISO protein:increased expression:serum
mRNA:increased expression:kidney
RGD PMID:3118258 PMID:8567024 PMID:17385664 RGD:7242737 RGD:7242754 RGD:7242759 NCBI chr 6:31,606,716...31,612,782 JBrowse link
G CHGA chromogranin A ISO associated with Hypertension;DNA:polymorphism:promoter:-415T>C (human) RGD PMID:20113265 RGD:6906902 NCBI chr14:73,555,834...73,568,547
Ensembl chr14:92,895,450...92,908,159
JBrowse link
G CORO1C coronin 1C ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr12:106,220,755...106,306,098
Ensembl chr12:109,617,093...109,674,368
JBrowse link
G CXCR2 C-X-C motif chemokine receptor 2 ISO DNA:SNPs: :rs4674257, rs4674259 (human) RGD PMID:21214373 RGD:7257677 NCBI chr2B:105,387,198...105,400,533
Ensembl chr2B:223,997,066...223,998,148
JBrowse link
G FABP1 fatty acid binding protein 1 ISO protein:increased expression:urine (human) RGD PMID:16118482 RGD:1578453 NCBI chr2A:87,256,032...87,303,505
Ensembl chr2A:89,165,315...89,170,448
JBrowse link
G FAS Fas cell surface death receptor treatment ISO RGD PMID:29844269 RGD:13792576 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
JBrowse link
G FCAR Fc alpha receptor ISO RGD PMID:21985370 PMID:22451718 RGD:7242063 RGD:7242167 NCBI chr19:51,919,345...51,935,340
Ensembl chr19:60,614,405...60,630,480
JBrowse link
G FCGR3A Fc gamma receptor IIIa disease_progression ISO DNA:polymorphism:exon:p.F176V(human) RGD PMID:16221721 RGD:5508463 NCBI chr 1:137,027,943...137,036,738 JBrowse link
G FN1 fibronectin 1 ISO protein:increased expression:kidney RGD PMID:15925904 RGD:7206844 NCBI chr2B:102,623,568...102,698,747
Ensembl chr2B:221,208,431...221,284,003
JBrowse link
G FOXM1 forkhead box M1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr12:2,978,400...2,999,077
Ensembl chr12:2,910,028...2,930,503
JBrowse link
G GPR183 G protein-coupled receptor 183 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr13:80,461,908...80,475,046
Ensembl chr13:99,601,220...99,602,305
JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 ISO protein:increased expression:urine: RGD PMID:21467131 PMID:23135864 RGD:7245479 RGD:7245983 NCBI chr 5:152,429,337...152,459,800
Ensembl chr 5:158,413,073...158,442,481
JBrowse link
G HPSE heparanase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 4:40,863,491...40,905,693
Ensembl chr 4:46,709,621...46,755,157
JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO DNA: snp::rs2229765 RGD PMID:21047277 RGD:7242795 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:22518072 RGD:6893446 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IL1A interleukin 1 alpha no_association ISO DNA:SNP:promoter RGD PMID:21049406 RGD:6907116 NCBI chr2A:89,273,482...89,284,421
Ensembl chr2A:113,784,854...113,795,801
JBrowse link
G IL1B interleukin 1 beta no_association ISO DNA:SNP
DNA:SNPs: :rs1143627, rs3917356, rs1143633 (human)
RGD PMID:19280228 PMID:21049406 RGD:6907082 RGD:6907116 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G IL1RN interleukin 1 receptor antagonist susceptibility ISO rat model treated with human protein
protein:decreased expression:serum, urine (human)
mouse model treated with human protein
response to immunoglobulin therapy
DNA:repeats:intron:IVS2+914_1000dup IL1RN*2 (human)
DNA:polymorphisms:intron, 3' utr:IVS1+1890G>T, IVS1+8796A>G, *138C>G (rs928940, rs439154, rs315951) (human)
RGD PMID:9370186 PMID:9844059 PMID:10079261 PMID:10566895 PMID:10916103 More... RGD:6906961 RGD:6907082 RGD:6907414 RGD:6907427 RGD:6909131 RGD:6909132 RGD:6909150 NCBI chr2A:88,991,646...89,008,013
Ensembl chr2A:114,061,182...114,078,839
JBrowse link
G KIF15 kinesin family member 15 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 3:44,656,791...44,774,655
Ensembl chr 3:45,713,962...45,809,700
JBrowse link
G LAIR1 leukocyte associated immunoglobulin like receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr19:51,306,570...51,316,878
Ensembl chr19:60,146,873...60,156,597
JBrowse link
G LAPTM5 lysosomal protein transmembrane 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 1:30,005,941...30,031,366
Ensembl chr 1:31,032,963...31,058,385
JBrowse link
G LCN2 lipocalin 2 ISO protein:increased expression:urine: RGD PMID:21467131 RGD:7245983 NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798
JBrowse link
G LHFPL2 LHFPL tetraspan subfamily member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 5:36,663,171...36,825,272
Ensembl chr 5:37,289,046...37,314,043
JBrowse link
G LOC100972994 HLA class II histocompatibility antigen, DQ beta 1 chain disease_progression ISO CTD Direct Evidence: marker/mechanism
DNA:polymorphism: :HLA-DQB1*0301(human)
CTD
RGD
PMID:7638860 PMID:25305756 RGD:36174018 NCBI chr 6:32,237,395...32,244,201
Ensembl chr 6:33,353,599...33,360,272
JBrowse link
G LOC100991118 defensin alpha 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22197929 PMID:25305756 NCBI chr 8:264,298...265,962 JBrowse link
G LOC117975341 complement factor H-related protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21399633 NCBI chr 1:172,355,204...172,389,914 JBrowse link
G MAN2B1 mannosidase alpha class 2B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr19:12,208,319...12,228,934
Ensembl chr19:12,954,103...12,974,056
JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr2A:89,977,226...90,109,970
Ensembl chr2A:113,056,852...113,162,052
JBrowse link
G MMP14 matrix metallopeptidase 14 ISO mRNA:increased expression:glomerulus RGD PMID:9848780 RGD:2314955 NCBI chr14:3,654,125...3,665,158
Ensembl chr14:21,753,305...21,764,058
JBrowse link
G MS4A6A membrane spanning 4-domains A6A ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr11:55,402,207...55,413,959
Ensembl chr11:58,847,867...58,860,947
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO DNA:polymorphism:Cds :2756A>G(human) RGD PMID:21737517 RGD:7207085 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946
JBrowse link
G NGF nerve growth factor ISO DNA:SNP: :rs11102930 (human) RGD PMID:21178826 RGD:7242801 NCBI chr 1:87,223,597...87,276,759 JBrowse link
G NOTCH2 notch receptor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32715474 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO protein:increased expression:kidney RGD PMID:22279542 RGD:7175260 NCBI chr11:59,342,820...59,355,386
Ensembl chr11:62,690,542...62,706,542
JBrowse link
G PDE5A phosphodiesterase 5A ISO DNA:SNP: :rs13124532(human) RGD PMID:20563733 RGD:7248685 NCBI chr 4:111,682,772...111,817,234
Ensembl chr 4:122,832,175...122,966,636
JBrowse link
G PIGR polymeric immunoglobulin receptor ISO ClinVar Annotator: match by term: IgA glomerulonephritis ClinVar PMID:12740691 PMID:16282702 NCBI chr 1:182,532,773...182,550,662
Ensembl chr 1:186,811,152...186,829,793
JBrowse link
G PLA2G7 phospholipase A2 group VII disease_progression ISO DNA:polymorphism:exon: RGD PMID:12220450 RGD:7257515 NCBI chr 6:46,264,262...46,318,487
Ensembl chr 6:47,558,861...47,590,212
JBrowse link
G PLAU plasminogen activator, urokinase ISO CTD Direct Evidence: therapeutic CTD PMID:9002298 NCBI chr10:70,433,340...70,441,569
Ensembl chr10:73,105,895...73,113,136
JBrowse link
G PRC1 protein regulator of cytokinesis 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr15:69,659,420...69,687,707
Ensembl chr15:88,856,323...88,884,071
JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 disease_progression ISO OMIM:161950 | OMIM:616818 RGD
MouseDO
PMID:11967037 RGD:6903255 NCBI chr11:57,774,560...57,780,334
Ensembl chr11:61,133,649...61,137,873
JBrowse link
G SELE selectin E ISO ClinVar Annotator: match by term: IgA nephropathy, susceptibility to ClinVar PMID:11828340 PMID:16282702 NCBI chr 1:145,205,684...145,217,143
Ensembl chr 1:148,930,437...148,938,313
JBrowse link
G SELL selectin L ISO RGD PMID:11828340 PMID:17452405 RGD:1625253 RGD:7175290 NCBI chr 1:145,173,700...145,194,927
Ensembl chr 1:148,895,373...148,916,393
JBrowse link
G SERPINB7 serpin family B member 7 disease_progression ISO DNA:SNPs:3' utr:2093C>T, 2180C>T (human)
DNA:SNP: :23167A>G (human)
DNA:SNP:5' utr, exon:267G>A (human)
RGD PMID:16550745 PMID:16796905 PMID:18793525 RGD:7207366 RGD:7207372 RGD:7207380 NCBI chr18:57,112,242...57,164,213
Ensembl chr18:60,445,135...60,475,165
JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:24744439 RGD:12859042 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SLC43A3 solute carrier family 43 member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr11:52,647,840...52,668,017
Ensembl chr 3:160,138,345...160,158,459
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 susceptibility ISO ClinVar Annotator: match by term: IgA nephropathy, susceptibility to, 3 OMIM
ClinVar
PMID:25741868 PMID:25741914 PMID:25782674 NCBI chr13:61,569,658...61,574,817
Ensembl chr13:80,596,346...80,597,408
JBrowse link
G ST6GALNAC2 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17480010 NCBI chr17:70,513,376...70,534,277
Ensembl chr17:76,204,947...76,226,088
JBrowse link
G STAT4 signal transducer and activator of transcription 4 disease_progression
no_association
ISO DNA:SNP: :rs7561832 (human)
DNA:SNP:intron:c.274-28828C>G (rs10181656) (human)
RGD PMID:20045654 PMID:20479942 RGD:7207872 RGD:7207878 NCBI chr2B:78,331,402...78,549,231
Ensembl chr2B:196,247,881...196,366,011
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11728950 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr  X:40,018,190...40,022,636
Ensembl chr  X:47,914,906...47,919,419
JBrowse link
G TLR1 toll like receptor 1 susceptibility ISO DNA:snps:promoter, cds:g.-414C>T, p.N248S (rs5743557, rs4833095) (human) RGD PMID:21108742 RGD:7246898 NCBI chr 4:33,119,485...33,133,541
Ensembl chr 4:38,979,006...38,981,366
JBrowse link
G TNF tumor necrosis factor treatment ISO RGD PMID:9844059 RGD:6909132 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A treatment ISO protein:increased expression:serum RGD PMID:9844059 PMID:16209246 RGD:6907414 RGD:6909132 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B treatment ISO protein:increased expression:serum RGD PMID:9844059 PMID:16209246 RGD:6907414 RGD:6909132 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646
JBrowse link
G TNFSF13 TNF superfamily member 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22197929 NCBI chr17:7,589,931...7,593,527
Ensembl chr17:7,576,465...7,579,834
JBrowse link
G VAV3 vav guanine nucleotide exchange factor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25305756 NCBI chr 1:110,101,651...110,531,294
Ensembl chr 1:109,210,813...109,617,658
JBrowse link
G VSIG4 V-set and immunoglobulin domain containing 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr  X:55,137,938...55,155,569
Ensembl chr  X:65,211,313...65,229,332
JBrowse link
G WAS WASP actin nucleation promoting factor ISO OMIM:161950 | OMIM:616818 MouseDO NCBI chr  X:40,982,132...40,989,767
Ensembl chr  X:48,842,765...48,850,380
JBrowse link
lipoid nephrosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A treatment ISO RGD PMID:24119646 RGD:10043363 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G IL13 interleukin 13 ISO RGD PMID:17429054 RGD:2290347 NCBI chr 5:128,073,863...128,078,453
Ensembl chr 5:134,235,788...134,240,548
JBrowse link
G IL17A interleukin 17A ISO Protein:increased expression:plasma (rat) RGD PMID:22772331 RGD:9068937 NCBI chr 6:51,736,269...51,740,538
Ensembl chr 6:53,004,820...53,009,074
JBrowse link
G LGALS1 galectin 1 ISO protein:decreased expression:glomerulus, podocytes (rat) RGD PMID:19079321 RGD:2316526 NCBI chr22:18,593,154...18,597,432
Ensembl chr22:36,426,228...36,430,356
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta ISO ClinVar Annotator: match by term: Lipoid nephrosis ClinVar PMID:23687361 PMID:32581362 NCBI chr 9:97,730,850...97,820,554
Ensembl chr 9:126,240,722...126,322,420
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 disease_progression ISO RGD PMID:17890747 RGD:7174718 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269
JBrowse link
G STAT6 signal transducer and activator of transcription 6 no_association
severity
ISO DNA:polymorphism:3' utr:2964G>A (human)
DNA:polymorphism:3' utr:g.2964G>A (human)
DNA:repeat:exon, 5' utr:g.-3041(GT)15-16 (human)
RGD PMID:12900808 PMID:15687724 PMID:19011907 RGD:7244138 RGD:7244144 RGD:7244146 Ensembl chr12:32,068,679...32,085,099 JBrowse link
lupus nephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor ISO DNA:polymorphisms:promoter, intron:g.-429T>C rs1800625, g.-374T>A rs1800624, g.2184A>G rs3134940 (human) RGD PMID:22513366 RGD:6767309 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641
JBrowse link
G APOC3 apolipoprotein C3 ISO protein:increased expression:serum RGD PMID:17957542 RGD:7207211 NCBI chr11:111,667,816...111,670,861
Ensembl chr11:115,600,416...115,603,460
JBrowse link
G C3 complement C3 ISO protein:decreased expression:serum
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:21888025 PMID:31182691 RGD:7175544 NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
JBrowse link
G CCL2 C-C motif chemokine ligand 2 severity
susceptibility
ISO protein:increased expression:urine (human)
DNA:snp:promoter:g.-2518A>G (human)
RGD PMID:8558841 PMID:15188361 RGD:11528534 RGD:8549732 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CCR1 C-C motif chemokine receptor 1 disease_progression ISO RGD PMID:15153561 RGD:5688164 NCBI chr 3:46,107,526...46,114,229
Ensembl chr 3:47,214,688...47,215,755
JBrowse link
G CD40 CD40 molecule treatment ISO RGD PMID:18566369 PMID:19265127 PMID:23799000 RGD:7248418 RGD:7248425 RGD:7248429 NCBI chr20:42,455,711...42,467,139
Ensembl chr20:43,541,619...43,552,994
JBrowse link
G CD40LG CD40 ligand treatment ISO protein:increased expression:serum RGD PMID:11751940 PMID:12632425 PMID:13130474 PMID:15693003 PMID:20726330 RGD:7248426 RGD:7248439 RGD:7248600 RGD:7248710 RGD:7248714 NCBI chr  X:125,776,138...125,788,820
Ensembl chr  X:136,042,849...136,058,202
JBrowse link
G CFB complement factor B ISO RGD PMID:3183062 PMID:10623824 PMID:21893562 RGD:7242736 RGD:7242755 RGD:7242763 NCBI chr 6:31,606,716...31,612,782 JBrowse link
G CFH complement factor H ISO RGD PMID:22171659 RGD:5684551 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CLU clusterin ISO mRNA:increased expression: epithelial cell of renal tubule RGD PMID:9546356 RGD:8890679 NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523
JBrowse link
G COL1A1 collagen type I alpha 1 chain ISO mRNA, protein:increased expression:kidney cortex
associated with Graft vs Host Disease
RGD PMID:7700025 PMID:7723234 PMID:21354048 RGD:5688301 RGD:5688332 RGD:5688333 NCBI chr17:44,274,349...44,291,764
Ensembl chr17:49,150,677...49,166,677
JBrowse link
G CRP C-reactive protein no_association ISO RGD PMID:15692982 PMID:18852001 PMID:20039408 RGD:6907400 RGD:6909145 RGD:6909146 NCBI chr 1:135,062,102...135,064,402 JBrowse link
G CSF1 colony stimulating factor 1 ISO RGD PMID:17659436 PMID:21885670 RGD:7257567 RGD:7257589 NCBI chr 1:112,555,755...112,575,894
Ensembl chr 1:127,764,916...127,781,943
JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 ISO RGD PMID:15146424 RGD:7204726 NCBI chr2B:91,054,917...91,106,234
Ensembl chr2B:209,239,417...209,244,498
JBrowse link
G EGF epidermal growth factor ISO RGD PMID:21354048 RGD:5688301 NCBI chr 4:102,410,724...102,509,691
Ensembl chr 4:112,977,565...113,076,460
JBrowse link
G FAS Fas cell surface death receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:33632240 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
JBrowse link
G FCGR2B Fc gamma receptor IIb ISO RGD PMID:15681388 RGD:7240529 NCBI chr 1:137,074,342...137,090,962
Ensembl chr 1:140,882,043...140,890,637
JBrowse link
G IFNG interferon gamma ISO protein:increased expression:serum,urine
CTD Direct Evidence: marker/mechanism
protein:increased processing:kidney
RGD
CTD
PMID:22764573 PMID:29925830 PMID:31182691 RGD:14974252 RGD:6893369 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IL17A interleukin 17A treatment ISO RGD PMID:25129462 RGD:9244623 NCBI chr 6:51,736,269...51,740,538
Ensembl chr 6:53,004,820...53,009,074
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:20980973 RGD:6893449 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IL1B interleukin 1 beta ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:20410215 PMID:21641991 RGD:7175315 RGD:7175344 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G IL1RN interleukin 1 receptor antagonist resistance ISO associated with Lupus Erythematosus, Systemic; protein:increased expression:serum (human) RGD PMID:20538031 RGD:6907068 NCBI chr2A:88,991,646...89,008,013
Ensembl chr2A:114,061,182...114,078,839
JBrowse link
G ITGAM integrin subunit alpha M ISO RGD PMID:21719445 RGD:5147916 NCBI chr16:23,634,476...23,707,147
Ensembl chr16:31,630,146...31,702,406
JBrowse link
G JAK1 Janus kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:31182691 NCBI chr 1:64,083,562...64,315,909
Ensembl chr 1:65,973,904...66,024,991
JBrowse link
G KLKB1 kallikrein B1 susceptibility ISO DNA:SNPs:promoter: RGD PMID:19307730 RGD:7327150 NCBI chr 4:178,398,359...178,429,448
Ensembl chr 4:190,604,901...190,636,300
JBrowse link
G LOC100991644 low affinity immunoglobulin gamma Fc region receptor II-a ISO ClinVar Annotator: match by term: Lupus nephritis, susceptibility to ClinVar PMID:8636449 PMID:9843982 PMID:10675363 PMID:15367919 PMID:19915573 More... NCBI chr 1:136,892,311...136,906,450 JBrowse link
G MBL2 mannose binding lectin 2 disease_progression ISO DNA:polymorphism:exon: RGD PMID:24850777 RGD:12910847 NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22479529 NCBI chr16:35,711,866...35,738,881
Ensembl chr16:54,812,694...54,844,279
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22479529 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G MPO myeloperoxidase susceptibility ISO DNA:polymorphism: :−463G > A (human) RGD PMID:17896805 RGD:7174701 NCBI chr17:52,333,882...52,357,838
Ensembl chr17:57,201,073...57,212,111
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17283580 RGD:7245502 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:17880936 PMID:21509671 RGD:7174713 RGD:7174734 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269
JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO protein:increased expression:kidney RGD PMID:22279542 RGD:7175260 NCBI chr11:59,342,820...59,355,386
Ensembl chr11:62,690,542...62,706,542
JBrowse link
G PDCD1 programmed cell death 1 onset ISO DNA:polymorphism:intron:6867 C>T (human)
DNA:polymorphism: :
RGD PMID:15352422 PMID:15934088 PMID:21041733 RGD:7248675 RGD:7248676 RGD:7248678 NCBI chr12:130,849,353...130,858,776 JBrowse link
G SELL selectin L ISO RGD PMID:20512127 RGD:7175284 NCBI chr 1:145,173,700...145,194,927
Ensembl chr 1:148,895,373...148,916,393
JBrowse link
G SERPING1 serpin family G member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:4014294 NCBI chr11:52,838,502...52,855,781
Ensembl chr11:56,309,686...56,326,639
JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E treatment ISO mouse model RGD PMID:15494537 RGD:10760401 NCBI chr 1:179,466,263...179,474,779
Ensembl chr 1:183,755,392...183,764,937
JBrowse link
G STAT1 signal transducer and activator of transcription 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:31182691 NCBI chr2B:78,270,642...78,316,074
Ensembl chr2B:196,186,906...196,232,280
JBrowse link
G STAT4 signal transducer and activator of transcription 4 ISO RGD PMID:20980973 RGD:6893449 NCBI chr2B:78,331,402...78,549,231
Ensembl chr2B:196,247,881...196,366,011
JBrowse link
G STAT6 signal transducer and activator of transcription 6 disease_progression ISO RGD PMID:12874250 RGD:7244140 Ensembl chr12:32,068,679...32,085,099 JBrowse link
G TLR7 toll like receptor 7 ISO RGD PMID:19944565 RGD:7246905 NCBI chr  X:5,479,247...5,504,810
Ensembl chr  X:12,767,981...12,790,517
JBrowse link
G TNF tumor necrosis factor ISO protein:increased expression:glomerular mesangial cell RGD PMID:7750940 RGD:7394786 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFRSF11B TNF receptor superfamily member 11b ISO associated with Lupus Erythematosus, Systemic;protein:increased expression:urine RGD PMID:21691937 RGD:7205483 NCBI chr 8:115,614,778...115,643,387
Ensembl chr 8:118,134,305...118,162,422
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A severity ISO RGD PMID:10906156 PMID:19201910 RGD:7245569 RGD:7245572 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B treatment ISO RGD PMID:22674120 PMID:22846145 RGD:7245541 RGD:7245544 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 severity ISO protein:increased expression:urine RGD PMID:22788914 RGD:7241032 NCBI chr 1:103,377,815...103,395,118
Ensembl chr 1:102,091,336...102,107,732
JBrowse link
membranoproliferative glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:1556257 NCBI chr 4:50,773,244...50,790,474
Ensembl chr 4:56,605,322...56,622,418
JBrowse link
G ANGPT2 angiopoietin 2 ISO protein:increased expression:glomerulus (rat) RGD PMID:16014048 PMID:18272601 RGD:2314193 RGD:2314222 NCBI chr 8:718,367...782,534
Ensembl chr 8:6,506,014...6,566,915
JBrowse link
G C1QA complement C1q A chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:8840296 NCBI chr 1:21,821,927...21,825,020 JBrowse link
G C3 complement C3 ISO ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis ClinVar PMID:32581362 NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
JBrowse link
G CCL2 C-C motif chemokine ligand 2 treatment ISO RGD PMID:10411686 RGD:8549648 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CCN2 cellular communication network factor 2 ISO protein:increased expression:kidney, glomerulus (rat) RGD PMID:15172885 RGD:1601118 NCBI chr 6:129,729,572...129,733,113
Ensembl chr 6:133,836,319...133,842,077
JBrowse link
G CCR6 C-C motif chemokine receptor 6 treatment ISO RGD PMID:23192593 RGD:7483632 NCBI chr 6:165,094,563...165,109,774
Ensembl chr 6:170,069,689...170,084,779
JBrowse link
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:17893107 RGD:2293563 NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945
JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B ISO protein:decreased expression:kidney RGD PMID:16787597 RGD:2293620 NCBI chr12:12,742,258...12,747,404
Ensembl chr12:13,120,306...13,125,541
JBrowse link
G CFB complement factor B ISO RGD PMID:2329415 PMID:12091909 RGD:7242760 RGD:734771 NCBI chr 6:31,606,716...31,612,782 JBrowse link
G CFH complement factor H ISO ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis | ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis, type II ClinVar PMID:32581362 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CFHR5 complement factor H related 5 ISO ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis, type II ClinVar PMID:25741868 PMID:28492532 NCBI chr 1:172,541,948...172,574,591
Ensembl chr 1:176,876,635...176,908,723
JBrowse link
G CFI complement factor I ISO RGD PMID:18202746 RGD:6906892 NCBI chr 4:102,236,868...102,311,359
Ensembl chr 4:112,804,645...112,865,581
JBrowse link
G CXCR1 C-X-C motif chemokine receptor 1 ISO RGD PMID:23336303 RGD:7207859 NCBI chr2B:105,429,576...105,433,243
Ensembl chr2B:224,028,838...224,029,890
JBrowse link
G EDN1 endothelin 1 treatment ISO mRNA, protein:increased expression:glomerulus (rat) RGD PMID:8569091 PMID:11601021 RGD:4144848 RGD:8662296 NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545
JBrowse link
G EP300 E1A binding protein p300 treatment ISO RGD PMID:24344329 RGD:9588308 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G F5 coagulation factor V ISO RGD PMID:15172885 RGD:1601118 NCBI chr 1:144,996,757...145,070,046
Ensembl chr 1:148,718,897...148,790,915
JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:10082755 RGD:7206847 NCBI chr2B:102,623,568...102,698,747
Ensembl chr2B:221,208,431...221,284,003
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:21871881 RGD:7175308 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G KCNT2 potassium sodium-activated channel subfamily T member 2 ISO ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis ClinVar PMID:32581362 NCBI chr 1:171,722,130...172,112,927
Ensembl chr 1:176,003,920...176,390,592
JBrowse link
G MYOC myocilin ISO protein:increased expression:renal glomerulus (rat) RGD PMID:15610237 RGD:7401266 NCBI chr 1:147,128,541...147,146,227
Ensembl chr 1:150,841,630...150,858,628
JBrowse link
G PFN1 profilin 1 ISO RGD PMID:8651905 RGD:729497 NCBI chr17:4,993,853...4,996,811
Ensembl chr17:4,981,765...4,985,022
JBrowse link
G PON1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16175651 NCBI chr 7:87,253,476...87,279,650
Ensembl chr 7:100,841,286...100,867,493
JBrowse link
G PRF1 perforin 1 ISO mRNA:increased expression:glomerulus RGD PMID:10886554 RGD:1599935 NCBI chr10:67,071,141...67,078,057
Ensembl chr10:69,597,574...69,603,070
JBrowse link
G SPARC secreted protein acidic and cysteine rich ISO mRNA:increased expression:glomerulus RGD PMID:8644857 RGD:2300070 NCBI chr 5:147,087,903...147,112,466
Ensembl chr 5:153,090,181...153,115,750
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO RGD PMID:11703592 RGD:1601601 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856
JBrowse link
G TLR1 toll like receptor 1 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 4:33,119,485...33,133,541
Ensembl chr 4:38,979,006...38,981,366
JBrowse link
G TLR2 toll like receptor 2 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
G TLR4 toll like receptor 4 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
JBrowse link
G TLR5 toll like receptor 5 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 1:198,787,046...198,819,537
Ensembl chr 1:203,798,767...203,801,343
JBrowse link
G TLR6 toll like receptor 6 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 4:33,153,151...33,174,053
Ensembl chr 4:39,009,103...39,011,490
JBrowse link
G TLR7 toll like receptor 7 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr  X:5,479,247...5,504,810
Ensembl chr  X:12,767,981...12,790,517
JBrowse link
G TLR8 toll like receptor 8 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr  X:5,518,742...5,535,304 JBrowse link
G TSLP thymic stromal lymphopoietin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17686814 NCBI chr 5:106,440,136...106,446,849
Ensembl chr 5:112,242,490...112,250,130
JBrowse link
membranous glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO RGD PMID:12507911 RGD:1598547 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188
JBrowse link
G ALB albumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:1342223 PMID:9794552 PMID:11938814 PMID:12776520 PMID:15385633 More... NCBI chr 4:50,773,244...50,790,474
Ensembl chr 4:56,605,322...56,622,418
JBrowse link
G APOA1 apolipoprotein A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:7900854 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122
JBrowse link
G APOE apolipoprotein E ISO protein:increased expression:serum (rat) RGD PMID:22785171 RGD:6903854 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G C3 complement C3 ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:10729746 PMID:25954969 RGD:5129563 NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
JBrowse link
G C7 complement C7 ISO RGD PMID:6241952 RGD:1599528 NCBI chr 5:69,405,041...69,478,445
Ensembl chr 5:74,447,559...74,520,649
JBrowse link
G CD40 CD40 molecule treatment ISO RGD PMID:23223173 RGD:8547786 NCBI chr20:42,455,711...42,467,139
Ensembl chr20:43,541,619...43,552,994
JBrowse link
G CD40LG CD40 ligand treatment ISO associated with Lupus Erythematosus, Systemic RGD PMID:7564113 PMID:17911451 RGD:7248430 RGD:7248720 NCBI chr  X:125,776,138...125,788,820
Ensembl chr  X:136,042,849...136,058,202
JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B treatment ISO RGD PMID:24583340 RGD:10045363 NCBI chr12:12,742,258...12,747,404
Ensembl chr12:13,120,306...13,125,541
JBrowse link
G CFB complement factor B susceptibility ISO RGD PMID:3272818 RGD:7242764 NCBI chr 6:31,606,716...31,612,782 JBrowse link
G CFH complement factor H ISO mRNA, protein:increased expression:glomerulus RGD PMID:12911541 RGD:1599888 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G GAA alpha glucosidase ISO CTD Direct Evidence: marker/mechanism CTD PMID:15466083 NCBI chr17:74,188,296...74,206,593
Ensembl chr17:79,723,699...79,741,839
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:20588061 RGD:7175342 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G LOC100979269 alpha-2-macroglobulin ISO protein:increased expression:serum RGD PMID:9453001 RGD:10046046 NCBI chr12:9,154,457...9,202,833
Ensembl chr12:9,385,359...9,433,979
JBrowse link
G LRP2 LDL receptor related protein 2 ISO mRNA:decreased expression:glomerulus RGD PMID:10919857 RGD:1641827 NCBI chr2B:56,407,871...56,640,471
Ensembl chr2B:173,873,767...174,103,697
JBrowse link
G LRPAP1 LDL receptor related protein associated protein 1 ISO mRNA, protein:increased expression:glomerulus, epithelial cell RGD PMID:7723231 PMID:7778686 RGD:1641936 RGD:1641937 NCBI chr 4:3,663,649...3,683,450
Ensembl chr 4:3,646,179...3,666,098
JBrowse link
G MAP3K5 mitogen-activated protein kinase kinase kinase 5 ISO protein:increased activity,protein:renal glomerulus: RGD PMID:18178252 RGD:10412641 NCBI chr 6:134,316,841...134,582,843
Ensembl chr 6:138,406,398...138,641,727
JBrowse link
G MME membrane metalloendopeptidase ISO ClinVar Annotator: match by term: Congenital membranous nephropathy due to fetomaternal anti-neutral endopeptidase alloimmunization ClinVar PMID:15464186 PMID:24033266 PMID:25565308 PMID:25741868 PMID:26991897 More... NCBI chr 3:152,085,694...152,240,148
Ensembl chr 3:160,197,566...160,292,119
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:8613533 RGD:8547919 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin ISO RGD PMID:15882266 RGD:1598706 NCBI chr19:32,742,802...32,770,600
Ensembl chr19:41,492,444...41,518,471
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin ISO RGD PMID:15882266 RGD:1598706 NCBI chr 1:155,038,753...155,064,332 JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 treatment ISO RGD PMID:28711658 RGD:13439719 NCBI chr16:50,090,696...50,106,495
Ensembl chr16:69,470,288...69,489,731
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO mRNA:increased expression:renal cortex (rat) RGD PMID:14636300 RGD:10043359 NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063
JBrowse link
G PTPRU protein tyrosine phosphatase receptor type U ISO mRNA, protein:decreased expression:glomerulus RGD PMID:17457373 RGD:1642654 NCBI chr 1:28,507,078...28,597,154
Ensembl chr 1:29,551,912...29,622,104
JBrowse link
G RHOA ras homolog family member A ISO protein:increased activity:epithelial cell RGD PMID:17376765 RGD:1642963 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:24744439 RGD:12859042 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SPARC secreted protein acidic and cysteine rich ISO protein:increased expression:kidney RGD PMID:8943481 RGD:2300069 NCBI chr 5:147,087,903...147,112,466
Ensembl chr 5:153,090,181...153,115,750
JBrowse link
G TBXAS1 thromboxane A synthase 1 ISO RGD PMID:8982653 RGD:1601473 NCBI chr 7:131,772,947...131,958,647
Ensembl chr 7:144,255,211...144,439,523
JBrowse link
G TF transferrin ISO associated with Lupus Erythematosus, Systemic RGD PMID:22328173 RGD:7244198 NCBI chr 3:130,799,063...130,830,227
Ensembl chr 3:138,274,159...138,305,476
JBrowse link
G TSLP thymic stromal lymphopoietin treatment ISO RGD PMID:11920357 RGD:38549592 NCBI chr 5:106,440,136...106,446,849
Ensembl chr 5:112,242,490...112,250,130
JBrowse link
mesangial proliferative glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBN1 fibrillin 1 ISO mRNA:increased expression:cortex of kidney RGD PMID:25482639 RGD:12910487 NCBI chr15:27,358,780...27,593,539
Ensembl chr15:45,682,450...45,918,111
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO mRNA:increased expression:mesangial cell RGD PMID:10592054 RGD:10402100 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
JBrowse link
G GADD45G growth arrest and DNA damage inducible gamma ISO mRNA,protein:increased expression:kidney RGD PMID:16736195 RGD:14700866 NCBI chr 9:60,695,307...60,696,860
Ensembl chr 9:88,740,411...88,741,958
JBrowse link
G ITGA8 integrin subunit alpha 8 ISO mRNA:increased expression:cortex of kidney RGD PMID:25482639 RGD:12910487 NCBI chr10:15,838,320...16,045,206
Ensembl chr10:16,114,999...16,321,360
JBrowse link
G ITGAM integrin subunit alpha M exacerbates ISO RGD PMID:10623679 RGD:329901927 NCBI chr16:23,634,476...23,707,147
Ensembl chr16:31,630,146...31,702,406
JBrowse link
G NR4A1 nuclear receptor subfamily 4 group A member 1 ISO mRNA,protein:increased expression:kidney RGD PMID:16736195 RGD:14700866 NCBI chr12:36,703,903...36,740,211
Ensembl chr12:37,480,300...37,501,188
JBrowse link
G PDGFD platelet derived growth factor D treatment ISO mRNA,protein:increased expression:glomerulus,serum: RGD PMID:12937299 PMID:17308324 RGD:9854629 RGD:9854637 NCBI chr11:98,852,652...99,110,147
Ensembl chr11:102,357,079...102,593,273
JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 ISO protein:increased expression:renal glomerulus RGD PMID:20725139 RGD:11534982 NCBI chr 9:102,698,970...102,861,482
Ensembl chr 9:131,337,001...131,495,664
JBrowse link
G VWF von Willebrand factor ISO protein:increased expression:glomerulus: RGD PMID:10450036 RGD:11079208 NCBI chr12:6,073,836...6,249,806
Ensembl chr12:5,990,612...6,165,153
JBrowse link
nephrotic syndrome type 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA5 annexin A5 ISO protein:increased expression:urine RGD PMID:17999093 RGD:7242031 NCBI chr 4:113,868,218...113,897,243
Ensembl chr 4:125,006,038...125,034,972
JBrowse link
G AVIL advillin ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25741868 PMID:29058690 NCBI chr12:31,108,569...31,129,307
Ensembl chr12:31,369,872...31,389,847
JBrowse link
G AXDND1 axonemal dynein light chain domain containing 1 ISO ClinVar Annotator: match by term: Nephrotic syndrome, type 2 | ClinVar Annotator: match by term: Nephrotic syndrome, type 2, susceptibility to | ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:8589695 PMID:9536098 PMID:10742096 PMID:11805166 PMID:12464671 More... NCBI chr 1:154,847,978...155,043,339
Ensembl chr 1:158,536,967...158,724,251
JBrowse link
G COL4A3 collagen type IV alpha 3 chain ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25741868 NCBI chr2B:114,410,703...114,559,336
Ensembl chr2B:233,294,783...233,371,021
JBrowse link
G COL4A4 collagen type IV alpha 4 chain ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25741868 PMID:28492532 NCBI chr2B:114,227,135...114,410,564
Ensembl chr2B:233,065,678...233,205,892
JBrowse link
G COL4A5 collagen type IV alpha 5 chain ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:32581362 NCBI chr  X:97,538,978...97,797,019
Ensembl chr  X:108,008,689...108,166,095
JBrowse link
G CRB2 crumbs cell polarity complex component 2 ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25557779 PMID:25741868 PMID:27004616 PMID:27942854 PMID:28492532 More... NCBI chr 9:94,473,423...94,511,285
Ensembl chr 9:123,011,968...123,032,855
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin ISO ClinVar Annotator: match by term: NPHS2-related condition | ClinVar Annotator: match by term: Nephrotic syndrome, type 2 | ClinVar Annotator: match by term: Nephrotic syndrome, type 2, susceptibility to | ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome OMIM
ClinVar
PMID:1523708 PMID:8589695 PMID:8606597 PMID:9536098 PMID:10742096 More... NCBI chr 1:155,038,753...155,064,332 JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO mRNA:alternative form:blood, mononuclear cell RGD PMID:20419394 RGD:7174729 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269
JBrowse link
G NUP205 nucleoporin 205 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26878725 NCBI chr 7:127,525,777...127,620,680
Ensembl chr 7:140,037,092...140,118,983
JBrowse link
G NUP93 nucleoporin 93 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26878725 NCBI chr16:37,007,481...37,122,785
Ensembl chr16:56,140,546...56,255,561
JBrowse link
G PAX2 paired box 2 ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PLA2G7 phospholipase A2 group VII disease_progression ISO RGD PMID:9853251 RGD:7248793 NCBI chr 6:46,264,262...46,318,487
Ensembl chr 6:47,558,861...47,590,212
JBrowse link
G PLCE1 phospholipase C epsilon 1 ISO DNA:mutations: : RGD PMID:20591883 RGD:7257521 NCBI chr10:90,731,695...91,065,846
Ensembl chr10:94,278,550...94,575,024
JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:11799392 PMID:15880370 PMID:16840568 PMID:17089404 PMID:18805831 More... NCBI chr2B:103,672,934...103,743,802
Ensembl chr2B:222,276,353...222,347,258
JBrowse link
G TRPC6 transient receptor potential cation channel subfamily C member 6 ISO DNA:missense mutations, SNPs:exon, intron:multiple RGD PMID:21511817 RGD:7247446 NCBI chr11:96,414,498...96,551,670
Ensembl chr11:99,919,410...100,050,685
JBrowse link
G TSFM Ts translation elongation factor, mitochondrial ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25741868 PMID:29058690 NCBI chr12:31,123,500...31,154,310
Ensembl chr12:31,404,783...31,415,595
Ensembl chr12:31,404,783...31,415,595
JBrowse link
G WT1 WT1 transcription factor ISO ClinVar Annotator: match by term: Familial idiopathic steroid-resistant nephrotic syndrome | ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:1302008 PMID:1327525 PMID:1338906 PMID:1655284 PMID:1658787 More... NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
G XPO5 exportin 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26878725 NCBI chr 6:43,114,408...43,168,113
Ensembl chr 6:44,406,765...44,458,029
JBrowse link
nephrotic syndrome type 7 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGKE diacylglycerol kinase epsilon ISO ClinVar Annotator: match by term: DGKE-related condition | ClinVar Annotator: match by term: Hemolytic uremic syndrome with DGKE deficiency | ClinVar Annotator: match by term: Hemolytic uremic syndrome, atypical, susceptibility to, 7 | ClinVar Annotator: match by term: Immunoglobulin-mediated membranoproliferative glomerulonephritis | ClinVar Annotator: match by term: Nephrotic syndrome, type 7 OMIM
ClinVar
PMID:23274426 PMID:23542698 PMID:24747643 PMID:25135762 PMID:25349199 More... NCBI chr17:50,912,079...50,946,655
Ensembl chr17:55,773,896...55,802,485
JBrowse link
Salcedo Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LMX1B LIM homeobox transcription factor 1 beta ISO ClinVar Annotator: match by term: Nail-patella-like renal disease OMIM
ClinVar
PMID:23687361 PMID:24042019 PMID:25741868 PMID:26560070 PMID:28059119 More... NCBI chr 9:97,730,850...97,820,554
Ensembl chr 9:126,240,722...126,322,420
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17996
    disease of anatomical entity 15260
      Immune & Inflammatory Diseases 5048
        Inflammation 2416
          nephritis 391
            glomerulonephritis 342
              C1q Deficiency + 3
              IgA glomerulonephritis + 79
              Lymphopenic Hypergammaglobulinemia, Antibody Deficiency, Autoimmune Hemolytic Anemia, and Glomerulonephritis 0
              Marfanoid Habitus with Microcephaly and Glomerulonephritis 0
              acute poststreptococcal glomerulonephritis 0
              acute proliferative glomerulonephritis + 13
              anti-basement membrane glomerulonephritis 51
              chronic rapidly progressive glomerulonephritis 0
              diffuse glomerulonephritis + 0
              exudative glomerulonephritis 0
              focal embolic glomerulonephritis 0
              glomerulosclerosis + 130
              immune-complex glomerulonephritis 0
              lipoid nephrosis 7
              lupus nephritis 46
              membranous glomerulonephritis 30
              mesangial proliferative glomerulonephritis + 49
              proliferative glomerulonephritis 0
              rapidly progressive glomerulonephritis + 13
              subacute glomerulonephritis 0
Path 2
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  disease 17996
    disease of anatomical entity 15260
      Urogenital Diseases 4727
        urinary system disease 2403
          kidney disease 2174
            nephritis 391
              glomerulonephritis 342
                C1q Deficiency + 3
                IgA glomerulonephritis + 79
                Lymphopenic Hypergammaglobulinemia, Antibody Deficiency, Autoimmune Hemolytic Anemia, and Glomerulonephritis 0
                Marfanoid Habitus with Microcephaly and Glomerulonephritis 0
                acute poststreptococcal glomerulonephritis 0
                acute proliferative glomerulonephritis + 13
                anti-basement membrane glomerulonephritis 51
                chronic rapidly progressive glomerulonephritis 0
                diffuse glomerulonephritis + 0
                exudative glomerulonephritis 0
                focal embolic glomerulonephritis 0
                glomerulosclerosis + 130
                immune-complex glomerulonephritis 0
                lipoid nephrosis 7
                lupus nephritis 46
                membranous glomerulonephritis 30
                mesangial proliferative glomerulonephritis + 49
                proliferative glomerulonephritis 0
                rapidly progressive glomerulonephritis + 13
                subacute glomerulonephritis 0
paths to the root