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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:synovium cancer
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Accession:DOID:2706 term browser browse the term
Synonyms:exact_synonym: malignant tumor of synovium
 xref: NCI:C6531
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
 
synovial sarcoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO CTD Direct Evidence: therapeutic CTD PMID:16450387 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Shcbp1 SHC binding and spindle associated 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27572315 NCBI chr16:84,672,276...84,703,839
Ensembl chr16:84,672,321...84,703,844
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO RGD PMID:26520417 RGD:11069485 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Ss18 SS18 subunit of BAF chromatin remodeling complex ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:9428816 PMID:27572315 PMID:7951320 RGD:1599184 NCBI chr18:5,773,042...5,835,696
Ensembl chr18:5,773,042...5,835,333
JBrowse link
G Ssx1 SSX family member 1 ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
PMID:9428816 PMID:27572315 NCBI chr  X:13,931,433...13,939,732
Ensembl chr  X:13,931,470...13,939,720
JBrowse link
G Vim vimentin ISO CTD Direct Evidence: marker/mechanism CTD PMID:15043115 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18030
    disease of anatomical entity 17410
      musculoskeletal system disease 7137
        musculoskeletal system cancer 754
          connective tissue cancer 731
            synovium cancer 6
              malignant giant cell tumor of the tendon sheath 0
              synovial sarcoma + 6
Path 2
Term Annotations click to browse term
  disease 18030
    disease of cellular proliferation 7257
      cancer 5223
        organ system cancer 5060
          musculoskeletal system cancer 754
            connective tissue cancer 731
              synovium cancer 6
                malignant giant cell tumor of the tendon sheath 0
                synovial sarcoma + 6
paths to the root