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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:synovium cancer
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Accession:DOID:2706 term browser browse the term
Synonyms:exact_synonym: malignant tumor of synovium
 xref: NCI:C6531
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
synovial sarcoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO CTD Direct Evidence: therapeutic CTD PMID:16450387 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Shcbp1 SHC binding and spindle associated 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27572315 NCBI chr16:90,613,826...90,642,683
Ensembl chr16:90,613,870...90,641,420
JBrowse link
G Ss18 SS18 subunit of BAF chromatin remodeling complex ISO CTD Direct Evidence: marker/mechanism CTD PMID:9428816 PMID:27572315, PMID:7951320 RGD:1599184 NCBI chr18:6,020,267...6,083,055
Ensembl chr18:6,020,267...6,083,033
JBrowse link
G Ssx1 SSX family member 1 ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
PMID:9428816 PMID:27572315 NCBI chr  X:14,903,854...14,911,999
Ensembl chr  X:14,905,337...14,910,778
JBrowse link
G Vim vimentin ISO CTD Direct Evidence: marker/mechanism CTD PMID:15043115 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17129
    disease of anatomical entity 16476
      musculoskeletal system disease 6400
        musculoskeletal system cancer 722
          connective tissue cancer 701
            synovium cancer 5
              malignant giant cell tumor of the tendon sheath 0
              synovial sarcoma + 5
Path 2
Term Annotations click to browse term
  disease 17129
    disease of cellular proliferation 6944
      cancer 4896
        organ system cancer 4728
          musculoskeletal system cancer 722
            connective tissue cancer 701
              synovium cancer 5
                malignant giant cell tumor of the tendon sheath 0
                synovial sarcoma + 5
paths to the root