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ONTOLOGY REPORT - ANNOTATIONS


Term:gastroenteritis
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Accession:DOID:2326 term browser browse the term
Definition:INFLAMMATION of any segment of the GASTROINTESTINAL TRACT from ESOPHAGUS to RECTUM. Causes of gastroenteritis are many including genetic, infection, HYPERSENSITIVITY, drug effects, and CANCER.
Synonyms:exact_synonym: gastroenteritides;   infectious colitis, enteritis and gastroenteritis
 primary_id: MESH:D005759
 alt_id: RDO:0004895
 xref: NCI:C34632
For additional species annotation, visit the Alliance of Genome Resources.


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gastroenteritis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F2rl1 F2R like trypsin receptor 1 JBrowse link 2 25,222,324 25,235,275 RGD:11554173
G Tgfa transforming growth factor alpha JBrowse link 4 117,961,877 118,045,923 RGD:2317483
appendicitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:5147751
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:11554173
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11554173
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:6483822
atrophic gastritis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp4b ATPase H+/K+ transporting subunit beta JBrowse link 16 81,136,218 81,145,131 RGD:14696739
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:11554173
G Pth parathyroid hormone JBrowse link 1 178,215,829 178,218,761 RGD:7242421
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:5147582
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147582
Autoinflammation with Infantile Enterocolitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlrc4 NLR family, CARD domain containing 4 JBrowse link 6 22,167,874 22,194,755 RGD:8554872
RGD:7240710
campylobacteriosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:5684976
chemical colitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:13782278
G Casp7 caspase 7 JBrowse link 1 277,190,557 277,242,779 RGD:13782278
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:14695050
colitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:11554173
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686754
RGD:5686898
G Adk adenosine kinase JBrowse link 15 3,033,535 3,435,888 RGD:6482664
G Adrb3 adrenoceptor beta 3 JBrowse link 16 69,003,541 69,006,632 RGD:5684890
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:11554173
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:11554173
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:2306920
G Apln apelin JBrowse link X 134,856,719 134,866,210 RGD:1626177
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:5685667
G Aqp7 aquaporin 7 JBrowse link 5 57,358,297 57,372,332 RGD:1626292
G Arrb1 arrestin, beta 1 JBrowse link 1 164,502,099 164,573,947 RGD:5509893
G Atp5f1d ATP synthase F1 subunit delta JBrowse link 7 12,426,807 12,432,120 RGD:13792680
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:8657331
G Bmp6 bone morphogenetic protein 6 JBrowse link 17 26,955,142 27,112,820 RGD:7242194
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:5130869
G Cckbr cholecystokinin B receptor JBrowse link 1 170,262,218 170,272,298 RGD:2311333
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:2307009
G Ccr1 C-C motif chemokine receptor 1 JBrowse link 8 132,996,646 133,002,201 RGD:2307162
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:6893503
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:5508169
G Chek2 checkpoint kinase 2 JBrowse link 12 51,845,574 51,878,098 RGD:8554872
G Chuk component of inhibitor of nuclear factor kappa B kinase complex JBrowse link 1 263,848,829 263,884,354 RGD:2298659
G Ciita class II, major histocompatibility complex, transactivator JBrowse link 10 5,212,621 5,260,641 RGD:5491188
RGD:8554872
G Crhr2 corticotropin releasing hormone receptor 2 JBrowse link 4 85,286,371 85,329,374 RGD:5131259
RGD:5490987
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:5686873
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:5686873
G Ctss cathepsin S JBrowse link 2 197,655,780 197,679,768 RGD:5686873
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:7257706
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:5147670
G Dusp1 dual specificity phosphatase 1 JBrowse link 10 16,970,642 16,973,425 RGD:7771532
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5508810
G Fgf19 fibroblast growth factor 19 JBrowse link 1 218,058,405 218,061,693 RGD:11554173
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:8554872
G Gcg glucagon JBrowse link 3 48,442,635 48,451,650 RGD:11554173
G Ghrl ghrelin and obestatin prepropeptide JBrowse link 4 145,674,157 145,678,066 RGD:11554173
G Gsta4 glutathione S-transferase alpha 4 JBrowse link 8 85,497,557 85,514,732 RGD:5687963
G Havcr1 hepatitis A virus cellular receptor 1 JBrowse link 10 31,813,819 31,860,934 RGD:7245473
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:7207796
RGD:11554173
RGD:10766442
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:11041866
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:7207796
G Icos inducible T-cell co-stimulator JBrowse link 9 67,748,157 67,786,808 RGD:1624274
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:11554173
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:11554173
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:2298659
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7349385
RGD:11554173
RGD:7771532
RGD:7365024
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:4888509
RGD:11554173
RGD:4781448
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7204699
RGD:11554173
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:8142400
RGD:11554173
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:5687148
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Itgb2 integrin subunit beta 2 JBrowse link 20 11,777,773 11,815,647 RGD:6482227
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:7207796
G Lct lactase JBrowse link 13 44,998,414 45,040,593 RGD:1600240
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:5508401
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 JBrowse link 7 12,918,352 12,922,509 RGD:11554173
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:5687320
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1641979
RGD:11554173
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:11554173
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:10412318
G Muc2 mucin 2, oligomeric mucus/gel-forming JBrowse link 1 214,663,929 214,693,197 RGD:2324675
RGD:7349385
RGD:7349360
RGD:7349356
G Muc3 mucin 3, intestinal JBrowse link 12 22,535,663 22,584,775 RGD:1625545
RGD:7349360
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 6 52,122,085 52,156,473 RGD:11554173
G Nod1 nucleotide-binding oligomerization domain containing 1 JBrowse link 4 85,123,965 85,175,206 RGD:5508755
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1600781
RGD:5508755
RGD:5508727
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891411
RGD:11554173
RGD:5509045
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:2292124
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:5684542
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:5684542
G Pgf placental growth factor JBrowse link 6 108,994,016 109,004,598 RGD:6483587
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma JBrowse link 6 51,465,696 51,501,234 RGD:6482682
G Pla2g2a phospholipase A2 group IIA JBrowse link 5 157,282,650 157,285,295 RGD:6482729
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:5509936
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:6484264
G Ptger4 prostaglandin E receptor 4 JBrowse link 2 54,951,625 54,966,470 RGD:6483551
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:2298659
RGD:11554173
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:2298776
RGD:11554173
G Retn resistin JBrowse link 12 2,201,909 2,203,649 RGD:7207222
G RT1-CE13 RT1 class I, locus CE13 RGD:7387221
G Sell selectin L JBrowse link 13 82,369,820 82,387,774 RGD:5685703
G Selp selectin P JBrowse link 13 82,428,914 82,464,629 RGD:2312310
G Selplg selectin P ligand JBrowse link 12 48,577,905 48,579,196 RGD:6218987
G Si sucrase-isomaltase JBrowse link 2 170,220,794 170,301,348 RGD:1625545
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:11554173
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:5684975
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:11554173
G Tac1 tachykinin, precursor 1 JBrowse link 4 33,638,853 33,646,819 RGD:2304260
G Tacr1 tachykinin receptor 1 JBrowse link 4 113,247,236 113,416,139 RGD:2304260
G Tacr2 tachykinin receptor 2 JBrowse link 20 31,892,515 31,905,153 RGD:2304260
RGD:5147478
G Tff1 trefoil factor 1 JBrowse link 20 9,892,124 9,895,984 RGD:625375
G Timp3 TIMP metallopeptidase inhibitor 3 JBrowse link 7 23,543,125 23,594,170 RGD:11554173
G Tlr3 toll-like receptor 3 JBrowse link 16 50,016,466 50,031,011 RGD:5128708
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:2312573
RGD:7794773
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tst thiosulfate sulfurtransferase JBrowse link 7 119,616,323 119,623,072 RGD:11554173
G Ucn urocortin JBrowse link 6 26,602,144 26,602,974 RGD:5490987
G Ucn2 urocortin 2 JBrowse link 8 117,727,216 117,728,765 RGD:5131259
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:7207796
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:5685605
G Vipr2 vasoactive intestinal peptide receptor 2 JBrowse link 6 143,932,960 144,009,476 RGD:5685384
Crohn's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:1598568
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686726
RGD:11554173
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:8554872
G Alox12 arachidonate 12-lipoxygenase, 12S type JBrowse link 10 56,851,734 56,864,049 RGD:5509621
G Alpi alkaline phosphatase, intestinal JBrowse link 9 94,197,616 94,201,910 RGD:14367879
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:5685660
G Aqp7 aquaporin 7 JBrowse link 5 57,358,297 57,372,332 RGD:1626292
G Atg16l1 autophagy related 16-like 1 JBrowse link 9 94,879,876 94,915,231 RGD:11554173
G Bach2 BTB domain and CNC homolog 2 JBrowse link 5 47,458,891 47,807,176 RGD:11554173
G Bglap bone gamma-carboxyglutamate protein JBrowse link 2 187,741,770 187,748,445 RGD:6483321
RGD:6483546
G Bpi bactericidal/permeability-increasing protein JBrowse link 3 154,741,627 154,768,584 RGD:1580079
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:11554173
G Ccny cyclin Y JBrowse link 17 62,332,537 62,462,644 RGD:11554173
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:5490590
RGD:5490971
G Cldn1 claudin 1 JBrowse link 11 77,815,216 77,830,373 RGD:11341809
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6482309
RGD:11554173
G Dennd1b DENN domain containing 1B JBrowse link 13 56,015,813 56,242,041 RGD:11554173
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:11554173
G Efs embryonal Fyn-associated substrate JBrowse link 15 33,579,952 33,590,217 RGD:13592920
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5508810
G F13a1 coagulation factor XIII A1 chain JBrowse link 17 28,504,650 28,680,015 RGD:10450739
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:5147754
G Fam92b family with sequence similarity 92, member B JBrowse link 19 53,740,763 53,754,738 RGD:11554173
G Fcgr2a Fc fragment of IgG receptor IIa JBrowse link 13 91,146,878 91,163,691 RGD:5147918
G Fcgr3a Fc fragment of IgG receptor IIIa JBrowse link 13 89,385,775 89,396,047 RGD:1304543
G Fga fibrinogen alpha chain JBrowse link 2 181,997,562 182,013,726 RGD:5688758
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:11554173
G Fpr2 formyl peptide receptor 2 JBrowse link 1 59,800,558 59,809,507 RGD:11554173
G Fut2 fucosyltransferase 2 JBrowse link 1 101,631,633 101,651,668 RGD:11554173
G Gc GC, vitamin D binding protein JBrowse link 14 20,267,023 20,302,577 RGD:5509866
G Gpbar1 G protein-coupled bile acid receptor 1 JBrowse link 9 81,555,914 81,560,931 RGD:11554173
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:11352754
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:11538341
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:5490554
G Hfe homeostatic iron regulator JBrowse link 17 43,661,276 43,669,327 RGD:14701051
G Hspa1l heat shock protein family A (Hsp70) member 1 like JBrowse link 20 4,879,998 4,965,191 RGD:8554872
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:1625756
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:11554173
RGD:14974261
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:11554173
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11049181
RGD:14975133
RGD:11554173
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:11554173
G Il21r interleukin 21 receptor JBrowse link 1 196,996,405 197,024,185 RGD:6482789
G Il23r interleukin 23 receptor JBrowse link 4 98,203,788 98,306,729 RGD:8549568
RGD:11554173
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:11554173
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
RGD:7240710
G Irgm immunity-related GTPase M JBrowse link 10 34,213,885 34,221,968 RGD:11554173
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:6483020
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:5684406
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:11554173
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:5508401
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 JBrowse link 7 12,918,352 12,922,509 RGD:2311550
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:12910842
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:6483536
G Mst1 macrophage stimulating 1 JBrowse link 8 116,857,716 116,862,286 RGD:11554173
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:11554173
G Ncf4 neutrophil cytosolic factor 4 JBrowse link 7 119,481,711 119,499,426 RGD:11554173
G Nkx2-3 NK2 homeobox 3 JBrowse link 1 263,361,238 263,371,043 RGD:11554173
G Nlrp3 NLR family, pyrin domain containing 3 JBrowse link 10 45,884,324 45,918,290 RGD:11554173
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1600778
RGD:8554872
RGD:7240710
RGD:11554173
RGD:5508730
RGD:5508719
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:11554173
G Ocln occludin JBrowse link 2 30,527,327 30,577,218 RGD:11341809
G Pgf placental growth factor JBrowse link 6 108,994,016 109,004,598 RGD:6483592
G Phox2b paired-like homeobox 2b JBrowse link 14 42,711,169 42,718,707 RGD:11554173
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing JBrowse link 9 71,911,744 72,005,816 RGD:13592920
G Plaur plasminogen activator, urokinase receptor JBrowse link 1 81,328,171 81,344,954 RGD:6483800
G Pon1 paraoxonase 1 JBrowse link 4 30,249,749 30,276,297 RGD:5509924
G Pon3 paraoxonase 3 JBrowse link 4 30,311,981 30,338,679 RGD:5509924
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:11554173
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:11554173
G Prf1 perforin 1 JBrowse link 20 30,915,294 30,920,804 RGD:6482789
G Prkcq protein kinase C, theta JBrowse link 17 70,971,915 71,105,286 RGD:8554872
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5508200
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 JBrowse link 18 63,415,298 63,489,240 RGD:11554173
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 JBrowse link 2 206,342,066 206,390,348 RGD:6484668
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:14974239
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:11554173
G RT1-Ha RT1 class II, locus Ha JBrowse link 20 3,875,478 3,885,140 RGD:6480648
G Sell selectin L JBrowse link 13 82,369,820 82,387,774 RGD:13464267
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:5684938
RGD:11554173
RGD:5684968
RGD:5684956
RGD:5684952
RGD:5684942
RGD:5684941
RGD:5684939
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:1580609
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:6483020
RGD:6483027
G Tagap T-cell activation RhoGTPase activating protein JBrowse link 1 47,493,990 47,503,492 RGD:11554173
G Tcf7 transcription factor 7 JBrowse link 10 37,616,033 37,646,027 RGD:11554173
G Thbd thrombomodulin JBrowse link 3 142,748,673 142,752,325 RGD:5685011
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:11554173
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:5130893
RGD:11554173
RGD:8661753
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:5130893
RGD:8661753
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:5130893
G Tyk2 tyrosine kinase 2 JBrowse link 8 22,118,224 22,149,807 RGD:11554173
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 JBrowse link 9 95,295,701 95,302,822 RGD:6482850
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:1331525
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:5684406
G Vipr1 vasoactive intestinal peptide receptor 1 JBrowse link 8 130,283,453 130,313,431 RGD:5685618
G Vtn vitronectin JBrowse link 10 65,767,960 65,771,040 RGD:11554173
diverticulitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fam155a family with sequence similarity 155, member A JBrowse link 16 85,528,126 86,053,447 RGD:11554173
Enteritis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccr1 C-C motif chemokine receptor 1 JBrowse link 8 132,996,646 133,002,201 RGD:5688172
G Cxcl1 C-X-C motif chemokine ligand 1 JBrowse link 14 18,743,678 18,745,457 RGD:5135011
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:4145336
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:6909182
G Tnfsf15 TNF superfamily member 15 JBrowse link 5 79,553,935 79,569,974 RGD:11554173
Enterocolitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:14398729
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11554173
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:2311103
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:2311103
G Itgb2 integrin subunit beta 2 JBrowse link 20 11,777,773 11,815,647 RGD:6482226
G Klkb1 kallikrein B1 JBrowse link 16 50,151,127 50,175,407 RGD:7327138
G Nlrc4 NLR family, CARD domain containing 4 JBrowse link 6 22,167,874 22,194,755 RGD:11554173
Eosinophilic Enteropathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl26 C-C motif chemokine ligand 26 JBrowse link 12 24,157,182 24,161,870 RGD:11081160
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:11354940
eosinophilic esophagitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:6771318
G Ankrd27 ankyrin repeat domain 27 JBrowse link 1 91,857,048 91,958,763 RGD:11100048
G Ccl26 C-C motif chemokine ligand 26 JBrowse link 12 24,157,182 24,161,870 RGD:11081156
RGD:11081157
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:6893390
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:5490306
G Cyp2c6v1 cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 JBrowse link 1 147,713,879 147,814,410 RGD:11352743
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:11354947
G Pecam1 platelet and endothelial cell adhesion molecule 1 JBrowse link 10 94,850,971 94,913,202 RGD:6771318
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:11073602
G Tslp thymic stromal lymphopoietin JBrowse link 18 25,613,601 25,618,066 RGD:11554173
esophagitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:8699511
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:4145528
G Il4r interleukin 4 receptor JBrowse link 1 196,942,343 196,967,221 RGD:5131286
G Pga5 pepsinogen A5 JBrowse link 1 226,722,198 226,732,736 RGD:11554173
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5131286
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:5131286
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 JBrowse link 10 59,799,123 59,824,208 RGD:11554173
Experimental Colitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:632022
G Adrb3 adrenoceptor beta 3 JBrowse link 16 69,003,541 69,006,632 RGD:5684894
G Atp5f1a ATP synthase F1 subunit alpha JBrowse link 18 74,156,553 74,164,490 RGD:13703055
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:11039462
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:10054108
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:11041628
G Hsf1 heat shock transcription factor 1 JBrowse link 7 117,538,523 117,565,478 RGD:10402402
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:11522714
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:10755756
RGD:14975101
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11049170
RGD:14975260
RGD:11049485
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:14975282
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:8551835
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:8662978
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:8662978
RGD:11062146
RGD:11062139
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:11530069
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:729408
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 JBrowse link 15 344,204 1,048,849 RGD:10412026
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:5684406
G Kl Klotho JBrowse link 12 942,974 987,206 RGD:10403055
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:13800882
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:13800567
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:13207328
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:13207328
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:10412739
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:10413866
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:13204727
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:10448943
G Pdgfra platelet derived growth factor receptor alpha JBrowse link 14 35,527,926 35,581,130 RGD:11080973
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:11080973
G Phex phosphate regulating endopeptidase homolog, X-linked JBrowse link X 40,460,047 40,717,982 RGD:11556253
G Ptger4 prostaglandin E receptor 4 JBrowse link 2 54,951,625 54,966,470 RGD:727388
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:5684934
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:12880038
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:8661763
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:8661763
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:5684406
gastric mucosal hypertrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp4b ATPase H+/K+ transporting subunit beta JBrowse link 16 81,136,218 81,145,131 RGD:14696744
gastritis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aicda activation-induced cytidine deaminase JBrowse link 4 155,359,909 155,371,104 RGD:11039453
G Arpc1b actin related protein 2/3 complex, subunit 1B JBrowse link 12 11,252,300 11,265,849 RGD:11046273
G Cblif cobalamin binding intrinsic factor JBrowse link 1 228,118,048 228,132,296 RGD:11049585
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:11526150
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:14700949
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:10413874
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:5508759
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:2300274
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:10413874
ileitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccr2 C-C motif chemokine receptor 2 RGD:8661712
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:6892917
G Cd80 Cd80 molecule JBrowse link 11 64,815,201 64,855,293 RGD:6902902
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11554173
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:4837793
G Itgam integrin subunit alpha M JBrowse link 1 199,495,312 199,545,738 RGD:11554173
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:14695050
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:2312714
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:7241089
RGD:2312714
inflammatory bowel disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686819
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:6767556
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:11039049
G Alpi alkaline phosphatase, intestinal JBrowse link 9 94,197,616 94,201,910 RGD:14367877
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:6892712
G Ano6 anoctamin 6 JBrowse link 7 137,142,063 137,335,208 RGD:9684849
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:11554173
G Apc2 APC regulator of WNT signaling pathway 2 JBrowse link 7 12,258,468 12,280,459 RGD:11554173
G Atg16l1 autophagy related 16-like 1 JBrowse link 9 94,879,876 94,915,231 RGD:11554173
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:6482693
G Card9 caspase recruitment domain family, member 9 JBrowse link 3 3,798,346 3,806,841 RGD:11554173
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:13592920
G Cdh2 cadherin 2 JBrowse link 18 8,146,971 8,366,037 RGD:734737
G Chek2 checkpoint kinase 2 JBrowse link 12 51,845,574 51,878,098 RGD:8554872
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6482301
G Cul2 cullin 2 JBrowse link 17 56,952,480 56,992,716 RGD:11554173
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:8554872
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:11554173
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5509042
G Fgf23 fibroblast growth factor 23 JBrowse link 4 159,622,404 159,630,082 RGD:10044237
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:5490537
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:5490537
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:5147444
G Hpgd 15-hydroxyprostaglandin dehydrogenase JBrowse link 16 37,457,134 37,495,758 RGD:5688766
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:5685671
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:6218980
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:1625756
RGD:11554173
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:14975125
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5509948
RGD:5509968
G Igfbp3 insulin-like growth factor binding protein 3 JBrowse link 14 87,457,647 87,465,374 RGD:1626117
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:7495770
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7364854
RGD:11534627
RGD:14975125
RGD:11554173
RGD:8554872
G Il10ra interleukin 10 receptor subunit alpha JBrowse link 8 49,558,062 49,573,891 RGD:8554872
G Il10rb interleukin 10 receptor subunit beta JBrowse link 11 31,560,301 31,582,457 RGD:8554872
G Il18rap interleukin 18 receptor accessory protein JBrowse link 9 47,225,543 47,255,805 RGD:11554173
G Il19 interleukin 19 JBrowse link 13 47,663,592 47,677,869 RGD:8554872
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:10450573
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:13592920
G Il21r interleukin 21 receptor JBrowse link 1 196,996,405 197,024,185 RGD:6892935
G Il23r interleukin 23 receptor JBrowse link 4 98,203,788 98,306,729 RGD:11554173
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:13592920
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:5687148
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:8554872
RGD:11554173
G Inava innate immunity activator JBrowse link 13 53,088,438 53,108,713 RGD:11554173
G Irgm immunity-related GTPase M JBrowse link 10 34,213,885 34,221,968 RGD:11554173
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:11554173
G Itgal integrin subunit alpha L JBrowse link 1 198,744,053 198,781,745 RGD:11554173
G Itgb8 integrin subunit beta 8 JBrowse link 6 147,089,280 147,172,846 RGD:11554173
G Klkb1 kallikrein B1 JBrowse link 16 50,151,127 50,175,407 RGD:7327139
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:7243943
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:10449410
G Muc19 mucin 19, oligomeric JBrowse link 7 133,048,727 133,166,551 RGD:11554173
G Muc2 mucin 2, oligomeric mucus/gel-forming JBrowse link 1 214,663,929 214,693,197 RGD:13592920
G Nfil3 nuclear factor, interleukin 3 regulated JBrowse link 17 12,261,102 12,276,316 RGD:13592920
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:8554872
RGD:11554173
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:5508753
G Npsr1 neuropeptide S receptor 1 JBrowse link 8 25,246,174 25,483,582 RGD:4891931
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:6482691
G Plcg2 phospholipase C, gamma 2 JBrowse link 19 50,039,410 50,173,543 RGD:11554173
G Pomc proopiomelanocortin JBrowse link 6 28,382,937 28,388,771 RGD:5508804
RGD:5508805
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11554173
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 JBrowse link 2 206,342,066 206,390,348 RGD:11554173
G Rassf1 Ras association domain family member 1 JBrowse link 8 116,307,149 116,318,289 RGD:11554173
G Runx3 RUNX family transcription factor 3 JBrowse link 5 153,507,093 153,531,137 RGD:13592920
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 16 73,372,007 73,410,777 RGD:11554173
G Sfrp2 secreted frizzled-related protein 2 JBrowse link 2 182,723,732 182,731,277 RGD:11554173
G Slamf8 SLAM family member 8 JBrowse link 13 90,967,862 90,978,752 RGD:11554173
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:5684929
RGD:11554173
RGD:5684952
G Slc6a14 solute carrier family 6 member 14 JBrowse link X 120,624,522 120,647,964 RGD:1625272
G Smim35 small integral membrane protein 35 JBrowse link 8 49,491,533 49,556,062 RGD:8554872
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:13592920
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:10450573
RGD:11554173
G Tnfsf15 TNF superfamily member 15 JBrowse link 5 79,553,935 79,569,974 RGD:11554173
G Tpmt thiopurine S-methyltransferase JBrowse link 17 18,029,090 18,047,716 RGD:11038726
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:11079180
G Vnn1 vanin 1 JBrowse link 1 22,614,832 22,625,134 RGD:11554173
G Xbp1 X-box binding protein 1 JBrowse link 14 85,753,736 85,758,820 RGD:13592920
inflammatory bowel disease 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1l heat shock protein family A (Hsp70) member 1 like JBrowse link 20 4,879,998 4,965,191 RGD:8554872
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:13592920
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:13592920
RGD:8554872
G Prkcq protein kinase C, theta JBrowse link 17 70,971,915 71,105,286 RGD:8554872
inflammatory bowel disease 10 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg16l1 autophagy related 16-like 1 JBrowse link 9 94,879,876 94,915,231 RGD:7240710
RGD:8554872
inflammatory bowel disease 12 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gnai2 G protein subunit alpha i2 JBrowse link 8 116,370,730 116,391,337 RGD:13592920
inflammatory bowel disease 13 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:7240710
RGD:8554872
inflammatory bowel disease 14 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irf5 interferon regulatory factor 5 JBrowse link 4 56,804,477 56,816,271 RGD:7240710
inflammatory bowel disease 16 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tnfsf15 TNF superfamily member 15 JBrowse link 5 79,553,935 79,569,974 RGD:13592920
inflammatory bowel disease 17 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il23r interleukin 23 receptor JBrowse link 4 98,203,788 98,306,729 RGD:7240710
RGD:8554872
inflammatory bowel disease 19 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irgm immunity-related GTPase M JBrowse link 10 34,213,885 34,221,968 RGD:7240710
RGD:8554872
inflammatory bowel disease 25 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il10rb interleukin 10 receptor subunit beta JBrowse link 11 31,560,301 31,582,457 RGD:8554872
RGD:7240710
inflammatory bowel disease 28 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il10ra interleukin 10 receptor subunit alpha JBrowse link 8 49,558,062 49,573,891 RGD:7240710
RGD:8554872
inflammatory bowel disease 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:8554872
INFLAMMATORY BOWEL DISEASE, IMMUNODEFICIENCY, AND ENCEPHALOPATHY term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:7240710
RGD:8554872
ischemic colitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:13208543
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1580570
mucositis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:11554173
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:11554173
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:10450554
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:10450835
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7204497
RGD:14975283
RGD:11554173
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:11554173
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:5509078
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:11554173
G Muc2 mucin 2, oligomeric mucus/gel-forming JBrowse link 1 214,663,929 214,693,197 RGD:2303603
G Muc4 mucin 4, cell surface associated JBrowse link 11 71,242,973 71,285,217 RGD:2303603
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:5509078
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:10448991
G Tff3 trefoil factor 3 JBrowse link 20 9,850,800 9,855,481 RGD:11554173
G Tgfa transforming growth factor alpha JBrowse link 4 117,961,877 118,045,923 RGD:11554173
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link 12 51,908,105 51,934,704 RGD:13208871
Neonatal Inflammatory Skin and Bowel Disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:8554872
Neonatal Inflammatory Skin and Bowel Disease 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:8554872
RGD:7240710
G Iah1 isoamyl acetate hydrolyzing esterase 1 JBrowse link 6 43,393,113 43,400,330 RGD:8554872
Neonatal Inflammatory Skin and Bowel Disease 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:8554872
RGD:7240710
Neutropenic Enterocolitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7204427
Pediatric Crohn's Disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:5147769
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7394742
peptic esophagitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:8699511
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:2307110
G Cldn3 claudin 3 JBrowse link 12 21,831,341 21,832,813 RGD:11344880
G Cldn4 claudin 4 JBrowse link 12 24,761,210 24,763,008 RGD:2317602
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:10395244
G F11r F11 receptor JBrowse link 13 89,826,272 89,850,151 RGD:7488941
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:2307110
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:2307110
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:9854630
G Ptges prostaglandin E synthase JBrowse link 3 9,727,408 9,738,752 RGD:2300085
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:2325133
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1580209
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:11055189
perinatal necrotizing enterocolitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:8657143
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:11554173
G Akr1a1 aldo-keto reductase family 1 member A1 JBrowse link 5 135,482,068 135,498,693 RGD:11554173
G Aldh2 aldehyde dehydrogenase 2 family member JBrowse link 12 40,466,418 40,498,813 RGD:11554173
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:6483081
G Bnip3 BCL2 interacting protein 3 JBrowse link 1 211,248,098 211,265,282 RGD:11561971
G Cd14 CD14 molecule JBrowse link 18 29,560,341 29,562,290 RGD:4144091
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:5490305
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:5490305
G Cryl1 crystallin, lambda 1 JBrowse link 15 37,543,727 37,663,586 RGD:11554173
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:2317627
RGD:10395236
G Eno1 enolase 1 JBrowse link 5 167,288,223 167,299,610 RGD:11554173
G Hbegf heparin-binding EGF-like growth factor JBrowse link 18 29,330,302 29,340,185 RGD:10395236
RGD:11554173
G Hspa9 heat shock protein family A (Hsp70) member 9 JBrowse link 18 27,731,072 27,749,235 RGD:11554173
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma JBrowse link X 156,254,187 156,280,046 RGD:12791281
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7365018
RGD:11049491
G Il10rb interleukin 10 receptor subunit beta JBrowse link 11 31,560,301 31,582,457 RGD:5490305
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889475
RGD:5490305
RGD:4889473
RGD:729222
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7175550
G Lgals2 galectin 2 JBrowse link 7 120,071,122 120,077,612 RGD:11554173
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:11554173
G Map3k5 mitogen-activated protein kinase kinase kinase 5 JBrowse link 1 15,412,603 15,613,752 RGD:10412640
G Muc2 mucin 2, oligomeric mucus/gel-forming JBrowse link 1 214,663,929 214,693,197 RGD:2324672
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:8547529
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:11554173
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:11554173
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:11554173
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:11554173
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:10413911
G Plaur plasminogen activator, urokinase receptor JBrowse link 1 81,328,171 81,344,954 RGD:6483787
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:9999208
G Snai3 snail family transcriptional repressor 3 JBrowse link 19 55,276,211 55,290,031 RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Sord sorbitol dehydrogenase JBrowse link 3 114,176,127 114,207,368 RGD:11554173
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:2317627
G Tlr1 toll-like receptor 1 JBrowse link 14 45,062,662 45,065,014 RGD:5128779
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:5128779
G Tlr3 toll-like receptor 3 JBrowse link 16 50,016,466 50,031,011 RGD:5128779
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:5128779
RGD:11554173
RGD:5490305
G Tlr5 toll-like receptor 5 JBrowse link 13 101,364,784 101,385,764 RGD:5128779
G Tlr6 toll-like receptor 6 JBrowse link 14 45,024,351 45,041,188 RGD:5128779
G Tlr7 toll-like receptor 7 JBrowse link X 28,486,836 28,513,004 RGD:5128779
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:5128779
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:4144091
RGD:1580205
G Tubb5 tubulin, beta 5 class I JBrowse link 20 3,422,448 3,426,420 RGD:11554173
Proctocolitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:6909134
ulcerative colitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsm3 acyl-CoA synthetase medium-chain family member 3 JBrowse link 1 189,514,504 189,541,233 RGD:7241281
G Adcy7 adenylate cyclase 7 JBrowse link 19 19,702,307 19,762,973 RGD:11554173
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686726
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:7175063
G Alox12 arachidonate 12-lipoxygenase, 12S type JBrowse link 10 56,851,734 56,864,049 RGD:5509621
G Alpi alkaline phosphatase, intestinal JBrowse link 9 94,197,616 94,201,910 RGD:14367879
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:5685660
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:11554173
G Brinp3 BMP/retinoic acid inducible neural specific 3 JBrowse link 13 63,526,486 63,959,390 RGD:14398484
G Btnl2 butyrophilin-like 2 JBrowse link 20 4,140,184 4,156,365 RGD:9685032
G Card9 caspase recruitment domain family, member 9 JBrowse link 3 3,798,346 3,806,841 RGD:11554173
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:11554173
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:7488892
RGD:11554173
G Ccl7 C-C motif chemokine ligand 7 JBrowse link 10 69,423,083 69,424,933 RGD:6483784
G Ccny cyclin Y JBrowse link 17 62,332,537 62,462,644 RGD:11554173
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:6892920
G Ccr6 C-C motif chemokine receptor 6 JBrowse link 1 53,063,380 53,087,519 RGD:11554173
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:5490590
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:11554173
G Cdh3 cadherin 3 JBrowse link 19 38,668,957 38,719,801 RGD:11554173
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:8662406
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:5688304
G Cxcr1 C-X-C motif chemokine receptor 1 JBrowse link 9 81,466,430 81,469,299 RGD:11554173
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:11554173
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:6480657
G Cxcr4 C-X-C motif chemokine receptor 4 JBrowse link 13 45,314,952 45,318,856 RGD:6480657
G Dap death-associated protein JBrowse link 2 84,275,884 84,328,998 RGD:11554173
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:11554173
G Ecm1 extracellular matrix protein 1 JBrowse link 2 197,855,468 197,860,973 RGD:11554173
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5508810
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:5147754
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:13792562
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:13792562
G Fcgr2a Fc fragment of IgG receptor IIa JBrowse link 13 91,146,878 91,163,691 RGD:5147918
RGD:11554173
RGD:5147922
G Gc GC, vitamin D binding protein JBrowse link 14 20,267,023 20,302,577 RGD:5509866
G Ghrl ghrelin and obestatin prepropeptide JBrowse link 4 145,674,157 145,678,066 RGD:11554173
G Gna12 G protein subunit alpha 12 JBrowse link 12 15,890,202 15,971,212 RGD:11554173
G Gpr65 G-protein coupled receptor 65 JBrowse link 6 122,248,528 122,256,115 RGD:11554173
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:11352754
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:5490554
RGD:14700999
RGD:11538341
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:5490554
RGD:11538341
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 JBrowse link 1 114,453,033 114,653,787 RGD:11554173
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:11554173
G Hnmt histamine N-methyltransferase JBrowse link 3 905,111 937,038 RGD:5509777
G Hspa4 heat shock protein family A (Hsp70) member 4 JBrowse link 10 38,601,624 38,642,397 RGD:5688753
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:11554173
G Icoslg inducible T-cell co-stimulator ligand JBrowse link 20 11,330,000 11,340,307 RGD:11554173
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:5686432
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5509966
G Ikzf1 IKAROS family zinc finger 1 JBrowse link 14 91,782,281 91,867,828 RGD:11554173
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11554173
RGD:14975255
RGD:14975153
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:11554173
G Il18rap interleukin 18 receptor accessory protein JBrowse link 9 47,225,543 47,255,805 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:10450593
RGD:11554173
G Il1r2 interleukin 1 receptor type 2 JBrowse link 9 46,840,646 46,881,241 RGD:11554173
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:6909136
G Il23r interleukin 23 receptor JBrowse link 4 98,203,788 98,306,729 RGD:8549574
RGD:11554173
G Il7r interleukin 7 receptor RGD:11554173
G Irf5 interferon regulatory factor 5 JBrowse link 4 56,804,477 56,816,271 RGD:11554173
G Irgm immunity-related GTPase M JBrowse link 10 34,213,885 34,221,968 RGD:11554173
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:6483020
RGD:11554173
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:5684406
G Kif21b kinesin family member 21B JBrowse link 13 52,976,505 53,026,750 RGD:11554173
G Lamb1 laminin subunit beta 1 JBrowse link 6 50,528,796 50,596,593 RGD:11554173
G Lsp1 lymphocyte-specific protein 1 JBrowse link 1 215,628,750 215,662,505 RGD:11554173
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:11554173
G Masp2 mannan-binding lectin serine peptidase 2 JBrowse link 5 165,415,105 165,429,857 RGD:11554173
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:7207395
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:11554173
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:11554173
G Mst1 macrophage stimulating 1 JBrowse link 8 116,857,716 116,862,286 RGD:11554173
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:5508217
G Nkx2-3 NK2 homeobox 3 JBrowse link 1 263,361,238 263,371,043 RGD:11554173
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:11554173
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 JBrowse link 10 86,545,910 86,554,478 RGD:11554173
G Pon1 paraoxonase 1 JBrowse link 4 30,249,749 30,276,297 RGD:5509924
G Pon3 paraoxonase 3 JBrowse link 4 30,311,981 30,338,679 RGD:5509924
G Prdm1 PR/SET domain 1 JBrowse link 20 49,464,921 49,556,623 RGD:11554173
G Psmg1 proteasome assembly chaperone 1 JBrowse link 11 36,327,798 36,337,289 RGD:11554173
G Ptger4 prostaglandin E receptor 4 JBrowse link 2 54,951,625 54,966,470 RGD:6483532
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 JBrowse link 18 63,415,298 63,489,240 RGD:11554173
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:11554173
G Ripk2 receptor-interacting serine-threonine kinase 2 JBrowse link 5 29,838,713 29,870,390 RGD:11554173
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:14865009
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:11554173
G Sell selectin L JBrowse link 13 82,369,820 82,387,774 RGD:13464267
G Selp selectin P JBrowse link 13 82,428,914 82,464,629 RGD:6218993
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:5684968
RGD:11554173
G Slc26a3 solute carrier family 26 member 3 JBrowse link 6 50,725,085 50,766,306 RGD:11554173
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:6483020
RGD:11554173
G Thbd thrombomodulin JBrowse link 3 142,748,673 142,752,325 RGD:5685011
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:10450577
RGD:14975153
RGD:11554173
RGD:10450593
G Tnfsf15 TNF superfamily member 15 JBrowse link 5 79,553,935 79,569,974 RGD:11554173
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:11554173
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:5684406
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:5685619
G Vipr1 vasoactive intestinal peptide receptor 1 JBrowse link 8 130,283,453 130,313,431 RGD:5685618

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15619
    disease of anatomical entity 14948
      gastrointestinal system disease 4373
        gastroenteritis 389
          Cholera Morbus 0
          Enteritis + 16
          Enterocolitis + 53
          Typhlitis 0
          appendicitis 4
          campylobacteriosis 1
          diverticulitis + 1
          dysentery + 0
          eosinophilic gastroenteritis 0
          esophagitis + 27
          gastritis + 16
          inflammatory bowel disease + 325
          mucositis 16
          proctitis + 1
Path 2
Term Annotations click to browse term
  disease 15619
    disease of anatomical entity 14948
      gastrointestinal system disease 4373
        Gastrointestinal Diseases 2465
          gastroenteritis 389
            Cholera Morbus 0
            Enteritis + 16
            Enterocolitis + 53
            Typhlitis 0
            appendicitis 4
            campylobacteriosis 1
            diverticulitis + 1
            dysentery + 0
            eosinophilic gastroenteritis 0
            esophagitis + 27
            gastritis + 16
            inflammatory bowel disease + 325
            mucositis 16
            proctitis + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.