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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:nocardiosis
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Accession:DOID:2312 term browser browse the term
Definition:An opportunistic bacterial infectious disease that results_in disseminated infection in immunocompromised hosts, has_material_basis_in Nocardia asteroides. The infection has_symptom pneumonia, has_symptom cellulitis, has_symptom lesions in the brain or meninges, and has_symptom ascending regional lymphadenopathy. (DO)
Synonyms:exact_synonym: Cerebral Nocardioses;   Cerebral Nocardiosis;   Nocardia Infection;   Nocardia infectious disease;   Nocardioses;   Primary Cutaneous Nocardioses;   Primary Cutaneous Nocardiosis;   nocardia infections;   pulmonary nocardioses;   pulmonary nocardiosis
 primary_id: MESH:D009617
 xref: EFO:0007397;   GARD:7210;   ICD10CM:A43;   NCI:C171147
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
eumycotic mycetoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase severity ISO DNA:missense mutation:cds: (rs4680) (human) RGD PMID:20184498 RGD:8662334 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Tlr2 toll-like receptor 2 ISO mRNA:increased expression:footpad: RGD PMID:21205004 RGD:7794752 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630 		JBrowse link
G Tlr4 toll-like receptor 4 ISO mRNA:decreased expression:footpad: RGD PMID:21205004 RGD:7794752 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19050
    disease by infectious agent 2250
      Bacterial Infections and Mycoses 1116
        bacterial infectious disease 824
          opportunistic bacterial infectious disease 3
            nocardiosis 3
              eumycotic mycetoma 3
Path 2
Term Annotations click to browse term
  disease 19050
    disease by infectious agent 2250
      Bacterial Infections and Mycoses 1116
        bacterial infectious disease 824
          Gram-Positive Bacterial Infections 395
            Actinomycetales Infections 320
              nocardiosis 3
                eumycotic mycetoma 3
paths to the root