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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:factor XI deficiency
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Accession:DOID:2229 term browser browse the term
Definition:A blood coagulation disease that is characterized by deficiency of factor XI clotting factor and mild prolonged bleeding, especially of mucosal sites following trauma, and has_material_basis_in homozygous, compound heterozygous, or heterozygous mutation of the coagulation factor XI gene of chromosome 4q35.2. (DO)
Synonyms:exact_synonym: F11 deficiency;   PLASMA FACTOR XI DEFICIENCY;   PTA DEFICIENCY;   Rosenthal syndrome;   Rosenthal syndromes;   Rosenthal's Syndrome;   Rosenthal's disease;   Rosenthals Syndrome;   congenital factor XI deficiency;   factor XI deficiencies;   hemophilia C;   hereditary factor XI deficiency disease;   plasma thromboplastin antecedent deficiency
 primary_id: MESH:D005173
 alt_id: OMIA:000363;   OMIM:612416
 xref: GARD:9670;   ICD10CM:D68.1;   ICD9CM:286.2;   NCI:C84705
For additional species annotation, visit the Alliance of Genome Resources.



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factor XI deficiency term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp4v3 cytochrome P450, family 4, subfamily v, polypeptide 3 ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:32581362 PMID:34355501 NCBI chr 8:45,758,838...45,786,200
Ensembl chr 8:45,757,981...45,786,253
JBrowse link
G Duxbl1 double homeobox B-like 1 ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:34355501 NCBI chr14:25,979,011...25,990,590
Ensembl chr14:25,979,001...25,990,512
JBrowse link
G F11 coagulation factor XI ISO
IAGP
DNA:missense, nonsense, duplication, deletion:cds:
DNA:nonsense mutation:exon:G263X(human)
OMIM:612416
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Hereditary factor XI deficiency disease | ClinVar Annotator: match by term: Plasma factor XI deficiency
OMIM
MouseDO
CTD
ClinVar
RGD
PMID:1547342 PMID:2052060 PMID:2813350 PMID:7669672 PMID:7888672 More... RGD:1598923, RGD:11041741, RGD:11041742 NCBI chr 8:45,693,696...45,715,092
Ensembl chr 8:45,694,211...45,715,068
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:34355501 NCBI chr 8:45,386,137...45,505,294
Ensembl chr 8:45,388,484...45,505,294
JBrowse link
G Frg1 FSHD region gene 1 ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:34355501 NCBI chr 8:41,842,218...41,870,179
Ensembl chr 8:41,850,496...41,870,111
JBrowse link
G Klkb1 kallikrein B, plasma 1 ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:32581362 PMID:34355501 NCBI chr 8:45,719,725...45,747,872
Ensembl chr 8:45,719,726...45,747,896
JBrowse link
G Mtnr1a melatonin receptor 1A ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:34355501 NCBI chr 8:45,522,144...45,542,270
Ensembl chr 8:45,522,174...45,541,543
JBrowse link
G Triml1 tripartite motif family-like 1 ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:34355501 NCBI chr 8:43,582,843...43,633,531
Ensembl chr 8:43,582,844...43,594,523
JBrowse link
G Triml2 tripartite motif family-like 2 ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:34355501 NCBI chr 8:43,633,500...43,646,921
Ensembl chr 8:43,633,578...43,646,918
JBrowse link
G Zfp42 zinc finger protein 42 ISO ClinVar Annotator: match by term: Hereditary factor XI deficiency disease ClinVar PMID:25741868 PMID:34355501 NCBI chr 8:43,748,100...43,760,041
Ensembl chr 8:43,748,100...43,760,017
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18301
    disease of anatomical entity 15631
      hematopoietic system disease 3274
        blood coagulation disease 945
          Inherited Blood Coagulation Disease 204
            factor XI deficiency 10
Path 2
Term Annotations click to browse term
  disease 18301
    Developmental Disease 17912
      Congenital, Hereditary, and Neonatal Diseases and Abnormalities 17782
        genetic disease 17756
          monogenic disease 10362
            autosomal genetic disease 9535
              factor XI deficiency 10
paths to the root