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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:urogenital tuberculosis
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Accession:DOID:2149 term browser browse the term
Definition:An extrapulmonary tuberculosis that is located_in urogenital system. (DO)
Synonyms:exact_synonym: genitourinary tuberculosis;   urogenital tuberculoses
 xref: EFO:0007531;   ICD10CM:A18.1;   ICD9CM:016;   MESH:D014401;   MONDO:0006002
For additional species annotation, visit the Alliance of Genome Resources.


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renal tuberculosis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4r interleukin 4 receptor ISO protein:decreased expression:serum
DNA:polymorphism:cds:p.I50V (human) 		RGD PMID:21251883 PMID:19548368 RGD:5128510, RGD:7207069 NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:189,544,988...189,570,636 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19167
    disease of anatomical entity 18473
      Urogenital Diseases 5238
        urogenital tuberculosis 1
          Female Genital Tuberculosis 0
          Tuberculosis, Male Genital 0
          bladder tuberculosis 0
          renal tuberculosis 1
          tuberculous epididymitis 0
          tuberculous oophoritis 0
          tuberculous salpingitis 0
          ureter tuberculosis 0
Path 2
Term Annotations click to browse term
  disease 19167
    disease by infectious agent 2257
      Bacterial Infections and Mycoses 1120
        bacterial infectious disease 824
          Gram-Positive Bacterial Infections 395
            Actinomycetales Infections 321
              Mycobacterium Infections 320
                tuberculosis 131
                  extrapulmonary tuberculosis 18
                    urogenital tuberculosis 1
                      Female Genital Tuberculosis 0
                      Tuberculosis, Male Genital 0
                      bladder tuberculosis 0
                      renal tuberculosis 1
                      tuberculous epididymitis 0
                      tuberculous oophoritis 0
                      tuberculous salpingitis 0
                      ureter tuberculosis 0
paths to the root