coccidiosis - Ontology Report - Rat Genome Database

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

Advanced Search (OLGA)

RGD DISEASE ONTOLOGY - ANNOTATIONS

{{ watchLinkText }}

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:	coccidiosis	go back to main search page
Accession:	DOID:2113	browse the term
Definition:	A parasitic protozoa infectious disease that occurs in the intestinal tract of animals and humans caused by Coccidia protozoa. Immunocompromised persons are at greater risk of developing the infection. (DO)
Synonyms:	exact_synonym:	Besnoitiasis; Besnoitioses; Besnoitiosis; besnoitiases; coccidioses
	related_synonym:	intestinal coccidiosis
	primary_id:	MESH:D003048
	xref:	EFO:0007212; NCI:C34493
For additional species annotation, visit the Alliance of Genome Resources.

show annotations for term's descendants Sort by:
Rat (38) Mouse (27) Human (27) Chinchilla (23) Bonobo (23) Dog (24) Squirrel (21) Pig (24) Green Monkey (24) Naked Mole-rat (22) All
Genes (23)

coccidiosis

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

interleukin 2 receptor subunit beta

exacerbates

NCBI chr22:18,039,469...18,069,952
Ensembl chr22:35,874,898...35,899,038

Animal Toxoplasmosis

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

C-C motif chemokine ligand 5

mRNA, protein:increased expression:blood vessel endothelial cell

NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172

G

C-C motif chemokine receptor 2

NCBI chr 3:46,255,725...46,263,285
Ensembl chr 3:47,361,124...47,368,312

G

forkhead box P3

mRNA:decreased expression:placenta:

NCBI chr X:41,550,462...41,567,492
Ensembl chr X:49,402,652...49,417,029

G

heat shock protein family D (Hsp60) member 1

NCBI chr2B:84,729,615...84,743,352
Ensembl chr2B:202,623,497...202,636,959

G

indoleamine 2,3-dioxygenase 1

NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352

G

interleukin 17A

mRNA,protein:increased expression:placenta:

NCBI chr 6:51,736,269...51,740,538
Ensembl chr 6:53,004,820...53,009,074

G

interleukin 21

NCBI chr 4:114,795,979...114,806,936
Ensembl chr 4:125,943,495...125,951,915

G

interleukin 23 subunit alpha

NCBI chr12:32,575,321...32,576,856
Ensembl chr12:32,828,902...32,830,617

G

interleukin 2 receptor subunit beta

ameliorates

NCBI chr22:18,039,469...18,069,952
Ensembl chr22:35,874,898...35,899,038

G

interleukin 6

mRNA:increased expression:placenta:

NCBI chr 7:23,415,922...23,420,767

G

low density lipoprotein receptor

NCBI chr19:10,640,225...10,683,728
Ensembl chr19:11,357,311...11,396,791

G

nuclear receptor subfamily 4 group A member 2

NCBI chr2B:43,584,835...43,593,118
Ensembl chr2B:160,826,091...160,837,162

G

RAR related orphan receptor C

mRNA:increased expression:placenta:

NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490

G

stimulator of interferon response cGAMP interactor 1

severity

NCBI chr 5:134,845,689...134,852,938
Ensembl chr 5:140,967,399...140,973,846

Cerebral Toxoplasmosis

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

nuclear factor kappa B subunit 1

severity

NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098

cryptosporidiosis

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

mannose binding lectin 2

susceptibility

DNA:polymorphisms, haplotype:promoter,exon:

NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432

Ocular Toxoplasmosis

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

annexin A1

NCBI chr 9:51,647,404...51,665,990
Ensembl chr 9:71,929,728...71,948,779

G

interleukin 10

NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371

G

interleukin 17A

treatment

protein:increased expression:aqueous humor (human)

NCBI chr 6:51,736,269...51,740,538
Ensembl chr 6:53,004,820...53,009,074

G

interleukin 27

disease_progression

mRNA:increased expression:eye, cervical lymph node (mouse)

G

nucleotide binding oligomerization domain containing 2

susceptibility

DNA:snp:3' utr:g.*397A>C (rs3135499)(human)

NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773

toxoplasmosis

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

BCL2 associated X, apoptosis regulator

NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468

G

interleukin 27

susceptibility

PMID:22981537 PMID:31548322

RGD:126790501 RGD:126790522

G

NFKB inhibitor alpha

exacerbates

human gene in a mouse model

NCBI chr14:16,155,331...16,158,588

G

uncoupling protein 2

susceptibility

NCBI chr11:69,047,397...69,056,056
Ensembl chr11:72,354,529...72,363,185

Term paths to the root

Path 1
Term	Annotations
disease	15833
disease by infectious agent	2144
parasitic infectious disease	300
parasitic protozoa infectious disease	152
coccidiosis	23
cryptosporidiosis	1
cyclosporiasis	0
cystoisosporiasis	0
sarcocystosis	0
toxoplasmosis +	22

paths to the root