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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:placenta cancer
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Accession:DOID:2021 term browser browse the term
Definition:A female reproductive organ cancer that is located_in the placenta. (DO)
Synonyms:exact_synonym: Placental tumors;   malignant neoplasm of placenta;   malignant placental tumor;   neoplasm of placenta;   placental cancer;   primary malignant neoplasm of placenta
 primary_id: RDO:9004847
 xref: ICD9CM:181;   NCI:C3555
For additional species annotation, visit the Alliance of Genome Resources.


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choriocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 ISO testicular germ cell neoplasms RGD PMID:11764380 RGD:2289339 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Igf2 insulin-like growth factor 2 disease_progression ISO RGD PMID:17556377 RGD:2290454 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Insr insulin receptor disease_progression ISO RGD PMID:17556377 RGD:2290454 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO mRNA:increased expression:mononuclear cytotrophoblast cell RGD PMID:8504434 RGD:2292200 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO mRNA:increased expression:mononuclear cytotrophoblast cell RGD PMID:8504434 RGD:2292200 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO DNA, protein:hypermethylation, decreased expression:promoter, placenta RGD PMID:15507671 RGD:2290418 NCBI chr 7:23,543,125...23,594,170
Ensembl chr 7:23,544,215...23,594,133
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17150
    disease of anatomical entity 16494
      reproductive system disease 2733
        reproductive organ cancer 1133
          female reproductive organ cancer 520
            uterine cancer 308
              placenta cancer 6
                choriocarcinoma + 6
Path 2
Term Annotations click to browse term
  disease 17150
    disease of anatomical entity 16494
      Urogenital Diseases 4335
        Female Urogenital Diseases and Pregnancy Complications 2040
          Female Urogenital Diseases 1736
            female reproductive system disease 1732
              Female Genital Neoplasms 702
                Uterine Neoplasms 435
                  uterine cancer 308
                    placenta cancer 6
                      choriocarcinoma + 6
paths to the root