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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:peritoneum cancer
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Accession:DOID:1725 term browser browse the term
Definition:An organ system cancer that is located in the peritoneum. (DO)
Synonyms:exact_synonym: cancer of peritoneum
 xref: ICD10CM:C48.1;   ICD9CM:158.8
For additional species annotation, visit the Alliance of Genome Resources.

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peritoneum cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gp1ba glycoprotein Ib platelet subunit alpha sexual_dimorphism ISO associated with stomach cancer;protein:altered expression:peritoneum (human) RGD PMID:32724431 RGD:42722625 NCBI chrNW_004936677:2,774,076...2,779,660 JBrowse link
G Prg2 proteoglycan 2, pro eosinophil major basic protein severity ISO associated with colorectal cancer;protein:decreased expression:colorectum, eosinophil (human) RGD PMID:28439450 RGD:40902993 NCBI chrNW_004936581:5,101,041...5,103,175
Ensembl chrNW_004936581:5,100,623...5,102,857 		JBrowse link
peritoneal carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 ISO ClinVar Annotator: match by term: Primary peritoneal carcinoma ClinVar PMID:25741868 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736 		JBrowse link
peritoneal mesothelioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 ISO ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879 		JBrowse link
G Lats2 large tumor suppressor kinase 2 ISO ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chrNW_004936720:735,326...795,596
Ensembl chrNW_004936720:735,524...793,696 		JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chrNW_004936593:2,742,236...3,282,596
Ensembl chrNW_004936593:3,106,202...3,282,596 		JBrowse link
G Traf7 TNF receptor associated factor 7 ISO DNA:missense mutations:multiple RGD PMID:30171198 RGD:151356964 NCBI chrNW_004936694:1,868,309...1,886,772 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16464
    disease of cellular proliferation 6796
      cancer 4913
        organ system cancer 4697
          peritoneum cancer 7
            malignant peritoneal solitary fibrous tumor 0
            peritoneal carcinoma + 1
            peritoneal mesothelioma 4
Path 2
Term Annotations click to browse term
  disease 16464
    disease of cellular proliferation 6796
      Neoplasms by Site 6295
        Abdominal Neoplasms 18
          Peritoneal Neoplasms 17
            peritoneum cancer 7
              malignant peritoneal solitary fibrous tumor 0
              peritoneal carcinoma + 1
              peritoneal mesothelioma 4
paths to the root