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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:peritoneum cancer
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Accession:DOID:1725 term browser browse the term
Definition:An organ system cancer that is located in the peritoneum. (DO)
Synonyms:exact_synonym: cancer of peritoneum
 primary_id: RDO:9002717
 xref: ICD10CM:C48.1;   ICD9CM:158.8
For additional species annotation, visit the Alliance of Genome Resources.


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peritoneum cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT/enhancer binding protein beta severity ISO associated with stomach cancer RGD PMID:26514342 RGD:11556383 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Gp1ba glycoprotein Ib platelet subunit alpha sexual_dimorphism ISO associated with stomach cancer;protein:altered expression:peritoneum��(human) RGD PMID:32724431 RGD:42722625 NCBI chr10:57,260,680...57,263,546
Ensembl chr10:57,260,680...57,263,546
JBrowse link
G Prg2 proteoglycan 2 severity ISO associated with colorectal cancer;protein:decreased expression:colorectum, eosinophil (human) RGD PMID:28439450 RGD:40902993 NCBI chr 3:72,385,678...72,389,245
Ensembl chr 3:72,385,666...72,389,276
JBrowse link
peritoneal mesothelioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 ISO ClinVar Annotator: match by term: Peritoneal mesothelioma ClinVar NCBI chr 1:1,784,078...1,817,310
Ensembl chr 1:1,784,078...1,817,310
JBrowse link
G Lats2 large tumor suppressor kinase 2 ISO ClinVar Annotator: match by term: Peritoneal mesothelioma ClinVar NCBI chr15:37,943,609...37,995,175
Ensembl chr15:37,943,609...37,983,882
JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO ClinVar Annotator: match by term: Peritoneal mesothelioma ClinVar NCBI chr 2:117,396,084...117,993,604
Ensembl chr 2:117,396,007...117,454,769
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17129
    disease of cellular proliferation 6944
      cancer 4896
        organ system cancer 4728
          peritoneum cancer 6
            malignant peritoneal solitary fibrous tumor 0
            peritoneal carcinoma + 0
            peritoneal mesothelioma 3
Path 2
Term Annotations click to browse term
  disease 17129
    disease of cellular proliferation 6944
      Neoplasms by Site 6588
        Abdominal Neoplasms 17
          Peritoneal Neoplasms 16
            peritoneum cancer 6
              malignant peritoneal solitary fibrous tumor 0
              peritoneal carcinoma + 0
              peritoneal mesothelioma 3
paths to the root