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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:peritoneum cancer
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Accession:DOID:1725 term browser browse the term
Definition:An organ system cancer that is located in the peritoneum. (DO)
Synonyms:exact_synonym: cancer of peritoneum
 xref: ICD10CM:C48.1;   ICD9CM:158.8
For additional species annotation, visit the Alliance of Genome Resources.



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peritoneum cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated ISO ClinVar Annotator: match by term: Peritoneum cancer ClinVar PMID:20104584 PMID:25741868 PMID:26467025 PMID:28492532 PMID:29446198 More... NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta severity ISO associated with stomach cancer RGD PMID:26514342 RGD:11556383 NCBI chr 3:176,817,005...176,818,436
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Gp1ba glycoprotein Ib platelet subunit alpha sexual_dimorphism ISO associated with stomach cancer;protein:altered expression:peritoneum (human) RGD PMID:32724431 RGD:42722625 NCBI chr10:55,831,901...55,856,729
Ensembl chr10:55,352,899...55,356,774
JBrowse link
G Prg2 proteoglycan 2, pro eosinophil major basic protein severity ISO associated with colorectal cancer;protein:decreased expression:colorectum, eosinophil (human) RGD PMID:28439450 RGD:40902993 NCBI chr 3:90,469,192...90,472,759
Ensembl chr 3:70,062,535...70,066,101
JBrowse link
peritoneal carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 ISO ClinVar Annotator: match by term: Primary peritoneal carcinoma ClinVar PMID:25741868 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617
JBrowse link
peritoneal mesothelioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 ISO ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chr 1:3,980,801...4,014,029
Ensembl chr 1:2,160,411...2,193,640
JBrowse link
G Lats2 large tumor suppressor kinase 2 ISO ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chr15:35,940,632...35,992,225
Ensembl chr15:31,825,092...31,877,220
JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chr 2:114,837,815...115,393,052
Ensembl chr 2:112,909,321...113,464,590
JBrowse link
G Traf7 TNF receptor associated factor 7 ISO DNA:missense mutations:multiple RGD PMID:30171198 RGD:151356964 NCBI chr10:13,533,570...13,552,290
Ensembl chr10:13,533,570...13,552,203
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19141
    disease of cellular proliferation 7891
      cancer 5720
        organ system cancer 5468
          peritoneum cancer 9
            malignant peritoneal solitary fibrous tumor 0
            peritoneal carcinoma + 1
            peritoneal mesothelioma 4
Path 2
Term Annotations click to browse term
  disease 19141
    disease of cellular proliferation 7891
      Neoplasms by Site 7333
        Abdominal Neoplasms 20
          Peritoneal Neoplasms 19
            peritoneum cancer 9
              malignant peritoneal solitary fibrous tumor 0
              peritoneal carcinoma + 1
              peritoneal mesothelioma 4
paths to the root