RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: echinococcosis
Accession: DOID:1496
browse the term
Definition: A parasitic helminthiasis infectious disease that involves parasitic infection of humans and domestic animals caused by the larval stages of tapeworms of the genus Echinococcus in the liver, lungs, spleen, brain, heart and kidneys. (DO)
Synonyms: exact_synonym: Hydatid Cyst; Hydatid Cysts; Hydatidoses; echinococcal disease; echinococcoses; echinococcosis of liver; hepatic echinococcosis; hydatid disease; hydatidosis; liver echinococcus
primary_id: MESH:D004443
xref: EFO:0007245 ; ICD10CM:B67 ; ICD9CM:122 ; NCI:C84682
For additional species annotation, visit the
Alliance of Genome Resources .
G
Abo
ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase
ISO
RGD
PMID:2142987
RGD:5128834
NCBI chr 2:26,732,508...26,754,973
Ensembl chr 2:26,732,515...26,754,991
G
Alb
albumin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:24270252
NCBI chr 5:90,608,729...90,624,461
Ensembl chr 5:90,608,756...90,624,461
G
Hbb-b1
hemoglobin, beta adult major chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:24270252
G
Il5
interleukin 5
IEP
mRNA: increased expression: : peritoneal lavage cells
RGD
PMID:21912714
RGD:5687176
NCBI chr11:53,611,621...53,615,930
Ensembl chr11:53,611,621...53,615,933
G
Trf
transferrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:24270252
NCBI chr 9:103,086,075...103,107,485
Ensembl chr 9:103,081,200...103,107,643
G
Cd274
CD274 antigen
treatment
IMP
RGD
PMID:30315719
RGD:41410787
NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495
G
H2-Ab1
histocompatibility 2, class II antigen A, beta 1
disease_progression
ISO
DNA:polymorphism: :HLA-DQB1*02(human)
RGD
PMID:9756400
RGD:36174003
NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393
G
H2-Eb1
histocompatibility 2, class II antigen E beta
ISO
DNA:polymorphisms: :HLA-DRB1*03, DRB1*11(human)
RGD
PMID:9756400
RGD:36174003
NCBI chr17:34,524,841...34,535,648
Ensembl chr17:34,524,841...34,535,648
G
Tlr2
toll-like receptor 2
ISO
mRNA:increased expression:PBMC
RGD
PMID:30141853
RGD:15090814
NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074
G
H2-Ab1
histocompatibility 2, class II antigen A, beta 1
ISO
DNA:polymorphisms: :HLA- DQB1*0.9, DQB1*02(human)
RGD
PMID:22308705
RGD:36174019
NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393
G
H2-Eb1
histocompatibility 2, class II antigen E beta
ISO
DNA:polymorphism: :HLA-DRB1*03, DRB1*07(human)
RGD
PMID:22308705
RGD:36174019
NCBI chr17:34,524,841...34,535,648
Ensembl chr17:34,524,841...34,535,648
G
Il4
interleukin 4
treatment
ISO
RGD
PMID:25726962
RGD:14696685
NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496
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Tlr2
toll-like receptor 2
disease_progression
ISO
DNA:mutation:cds:Arg753Gln(human) mRNA:increased expression:peripheral blood monocyte:
RGD
PMID:31437685 PMID:21923667
RGD:15090825 , RGD:18182935
NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074
G
Tlr4
toll-like receptor 4
ISO
mRNA:increased expression:peripheral blood monocyte:
RGD
PMID:21923667
RGD:18182935
NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521
G
Cd274
CD274 antigen
IEP
mRNA, protein:increased expression:liver
RGD
PMID:25907244
RGD:41412175
NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495
G
Igf2
insulin-like growth factor 2
ISO
protein:decreased expression:serum
RGD
PMID:12927688
RGD:5509967
NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553
G
Pdcd1
programmed cell death 1
IEP
mRNA, protein:increased expression:liver
RGD
PMID:25907244
RGD:41412175
NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278
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