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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Saethre-Chotzen syndrome
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Accession:DOID:14768 term browser browse the term
Definition:An acrocephalosyndactylia that has_material_basis_in a genetic mutation in the TWIST1 gene which results_in premature fusion located_in skull. (DO)
Synonyms:exact_synonym: ACS III;   ACS3;   BLEPHAROPHIMOSIS, EPICANTHUS INVERSUS, AND PTOSIS 3;   BPES3;   Chotzen syndrome;   OMIM:101400;   SCS;   Saethre-Chotzen Syndrome with Eyelid Anomalies;   acrocephalosyndactylies, type 3;   acrocephalosyndactylies, type III;   acrocephalosyndactyly III;   acrocephalosyndactyly type III
 primary_id: MESH:C566325
 alt_id: RDO:0014711
 xref: GARD:7598;   NCI:C75034;   ORDO:794
For additional species annotation, visit the Alliance of Genome Resources.



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Saethre-Chotzen syndrome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 ISO ClinVar Annotator: match by term: Saethre-Chotzen syndrome
ClinVar Annotator: match by term: ACS III
ClinVar
OMIM
PMID:7558045 PMID:7719344 PMID:7773284 PMID:7874170 PMID:7987400 More... NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO ClinVar Annotator: match by term: Saethre-Chotzen syndrome ClinVar PMID:8723106 PMID:8841188 PMID:9042914 PMID:9107244 PMID:9279753 More... NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Saethre-Chotzen syndrome
ClinVar Annotator: match by term: Saethre-Chotzen syndrome with eyelid anomalies
CTD
ClinVar
OMIM
PMID:8968762 PMID:8988166 PMID:8988167 PMID:9259286 PMID:9934984 More... NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17289
    syndrome 8166
      chromosomal duplication syndrome 756
        syndactyly 62
          acrocephalosyndactylia 8
            Saethre-Chotzen syndrome 3
Path 2
Term Annotations click to browse term
  disease 17289
    disease of anatomical entity 16625
      Skin and Connective Tissue Diseases 5863
        connective tissue disease 4447
          bone disease 3124
            bone development disease 1425
              dysostosis 394
                synostosis 242
                  craniosynostosis 187
                    acrocephalosyndactylia 8
                      Saethre-Chotzen syndrome 3
paths to the root