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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:lymphangioma
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Accession:DOID:1475 term browser browse the term
Definition:A benign tumor resulting from a congenital malformation of the lymphatic system. Lymphangioendothelioma is a type of lymphangioma in which endothelial cells are the dominant component.
Synonyms:exact_synonym: Cavernous Lymphangioma;   Congenital lymphangioma;   Lymphangioendothelioma;   Lymphangioendotheliomas;   Lymphangiomas;   Lymphatic Endothelioma;   benign lymphangioma;   cavernous lymphangiomas;   lymphatic endotheliomas
 primary_id: MESH:D008202
 alt_id: RDO:0000740
 xref: GARD:9789;   ICD10CM:D18.1;   ICD9CM:228.1;   NCI:C8965
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
lymphangioma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt4 Fms related receptor tyrosine kinase 4 ISO protein:increased expression:;lymphatic endothelial cell: RGD PMID:17584927 RGD:8552338 NCBI chr10:35,078,782...35,120,296
Ensembl chr10:35,078,726...35,121,599
JBrowse link
G Kdr kinase insert domain receptor ISO protein:increased expression:;lymphatic endothelial cell: RGD PMID:17584927 RGD:8552338 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
colon adenoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha ISO protein:increased expression:colonic mucosa (human) RGD PMID:10363580 RGD:10401945 NCBI chr 1:219,076,618...219,126,221
Ensembl chr 1:219,077,771...219,126,220
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 ISO RGD PMID:26194191 RGD:11086893 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996
JBrowse link
G Rac1 Rac family small GTPase 1 ISO RGD PMID:12865273 RGD:13432048 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
cystic lymphangioma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a2 collagen type XI alpha 2 chain ISO ClinVar Annotator: match by term: Cystic hygroma ClinVar PMID:22246659 PMID:24033266 PMID:25741868 PMID:26445815 PMID:29456477 PMID:31680349 NCBI chr20:3,829,324...3,859,022
Ensembl chr20:3,830,164...3,859,018
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17147
    disease of cellular proliferation 6946
      Neoplasms by Histologic Type 4765
        Lymphatic Vessel Tumors 19
          lymphangioma 6
            capillary lymphangioma 0
            colonic benign neoplasm + 3
            colonic lymphangioma 0
            cystic lymphangioma + 1
Path 2
Term Annotations click to browse term
  disease 17147
    disease of cellular proliferation 6946
      benign neoplasm 1930
        organ system benign neoplasm 1086
          cardiovascular organ benign neoplasm 86
            benign vascular tumor 6
              lymphangioma 6
                capillary lymphangioma 0
                colonic benign neoplasm + 3
                colonic lymphangioma 0
                cystic lymphangioma + 1
paths to the root