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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:multiple intestinal atresia
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Accession:DOID:14671 term browser browse the term
Definition:An intestinal disease characterized by the presence of numerous atresic segments in the small and large intestines that has_material_basis_in homozygous or compound heterozygous mutation in TTC7A on chromosome 2p21. (DO)
Synonyms:exact_synonym: FIPA;   GIDID;   GIDID1;   MEDDRA:10028210;   MINAT;   familial intestinal polyatresia syndrome;   gastrointestinal defects and immunodeficiency syndrome;   gastrointestinal defects and immunodeficiency syndrome 1;   multiple gastrointestinal atresias;   multiple intestinal atresia and/or inflammatory bowel disease with or without immunodeficiency
 primary_id: MESH:C562441
 alt_id: OMIM:243150
 xref: GARD:3013;   ORDO:2300
For additional species annotation, visit the Alliance of Genome Resources.



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multiple intestinal atresia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcfd2 multiple coagulation factor deficiency 2 ISO ClinVar Annotator: match by term: Multiple gastrointestinal atresias ClinVar PMID:23830146 PMID:24292712 PMID:25741868 PMID:28492532 NCBI chr 6:7,274,469...7,285,841
Ensembl chr 6:7,274,469...7,285,841
JBrowse link
G Ttc7a tetratricopeptide repeat domain 7A ISO ClinVar Annotator: match by term: Gastrointestinal defects and immunodeficiency syndrome | ClinVar Annotator: match by term: Gastrointestinal defects and immunodeficiency syndrome 1 | ClinVar Annotator: match by term: Multiple gastrointestinal atresias OMIM
ClinVar
PMID:9536098 PMID:16199547 PMID:17576681 PMID:23423984 PMID:23830146 More... NCBI chr 6:7,159,285...7,261,826
Ensembl chr 6:7,159,061...7,261,892
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18156
    disease of anatomical entity 17531
      gastrointestinal system disease 6620
        intestinal disease 2968
          intestinal atresia 11
            multiple intestinal atresia 2
Path 2
Term Annotations click to browse term
  disease 18156
    Developmental Disease 12940
      Congenital, Hereditary, and Neonatal Diseases and Abnormalities 11670
        genetic disease 11174
          monogenic disease 8709
            autosomal genetic disease 7745
              autosomal recessive disease 4832
                multiple intestinal atresia 2
paths to the root