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ONTOLOGY REPORT - ANNOTATIONS


Term:choroid disease
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Accession:DOID:1417 term browser browse the term
Definition:Disorders of the choroid including hereditary choroidal diseases, neoplasms, and other abnormalities of the vascular layer of the uvea.
Synonyms:exact_synonym: Choroidal Disease;   Choroidal Diseases;   choroid diseases
 narrow_synonym: CHOROIDAL DYSTROPHY;   Collie eye anomaly;   choroidal hypoplasia
 primary_id: MESH:D015862;   RDO:0000438
 alt_id: OMIA:000218
 xref: ICD10CM:H31.9;   ICD9CM:363.9;   NCI:C34468
For additional species annotation, visit the Alliance of Genome Resources.


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choroid disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7364844
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:8554872
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8554872
autosomal dominant vitreoretinochoroidopathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Best1 bestrophin 1 JBrowse link 1 226,033,146 226,049,893 RGD:7240710
RGD:8554872
G Fth1 ferritin heavy chain 1 JBrowse link 1 226,030,940 226,033,228 RGD:8554872
birdshot chorioretinopathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:5147908
G RT1-CE13 RT1 class I, locus CE13 RGD:7365121
chorioretinitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col2a1 collagen type II alpha 1 chain JBrowse link 7 139,454,945 139,484,403 RGD:8657355
Choroidal Dystrophy, Central Areolar 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:7240710
RGD:8554872
Choroidal Neovascularization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:8694464
RGD:8695931
RGD:2289282
G Aoc3 amine oxidase, copper containing 3 JBrowse link 10 89,251,370 89,259,313 RGD:2313908
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:8699493
RGD:8699501
G C5 complement C5 JBrowse link 3
3
14,049,993
14,206,466
14,113,931
14,229,141
RGD:7411733
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8548832
G Ccr2 C-C motif chemokine receptor 2 RGD:8657364
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:6893454
G Cfb complement factor B JBrowse link 20 4,536,206 4,542,073 RGD:7411733
G Cfh complement factor H JBrowse link 13 56,979,155 57,080,540 RGD:7364943
RGD:7365031
RGD:7365030
G F7 coagulation factor VII JBrowse link 16 81,824,610 81,834,923 RGD:2312299
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:8655568
G Flt1 Fms related receptor tyrosine kinase 1 JBrowse link 12 9,033,993 9,205,886 RGD:10402112
RGD:10402115
RGD:10402113
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:8548599
G Htra1 HtrA serine peptidase 1 JBrowse link 1 201,499,067 201,548,508 RGD:7394694
RGD:7394749
RGD:7394720
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:4145405
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:10045869
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:10045942
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7364853
RGD:7365068
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:10047086
G Itgav integrin subunit alpha V JBrowse link 3 71,113,269 71,205,958 RGD:1582458
G Jam3 junctional adhesion molecule 3 JBrowse link 8 28,147,110 28,208,466 RGD:7488935
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:8549713
RGD:8549747
RGD:8549741
RGD:8549738
RGD:8549716
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:10053625
G Loxl1 lysyl oxidase-like 1 JBrowse link 8 63,067,757 63,092,124 RGD:7394725
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:10043118
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:8657062
RGD:13207327
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:8547840
RGD:13207327
RGD:8657061
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:8554872
G RT1-CE13 RT1 class I, locus CE13 RGD:7365097
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:2312356
RGD:8655557
RGD:8554883
RGD:8554866
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:1581207
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:8694307
RGD:10403057
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:8552825
G Tymp thymidine phosphorylase JBrowse link 7 130,342,481 130,347,845 RGD:2293727
G Tyr tyrosinase JBrowse link 1 151,012,598 151,106,802 RGD:8554872
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:7483614
RGD:11554173
RGD:8548599
RGD:8548459
G Vegfb vascular endothelial growth factor B JBrowse link 1 222,237,000 222,242,786 RGD:2314323
Choroidal Neovascularization, Experimental term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:8547735
RGD:11073722
RGD:8547737
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:12859045
choroidal sclerosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gucy2d guanylate cyclase 2D, retinal JBrowse link 10 55,835,695 55,851,235 RGD:8554872
RGD:7240710
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8553207
RGD:8554858
Choroideremia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chm CHM Rab escort protein JBrowse link X 84,666,900 84,821,775 RGD:7240710
RGD:8554872
choroiditis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:8157614
gyrate atrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oat ornithine aminotransferase JBrowse link 1 204,562,289 204,582,070 RGD:1600292
RGD:8554872
RGD:7240710
microcephaly and chorioretinopathy 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plk4 polo-like kinase 4 JBrowse link 2 127,686,911 127,705,518 RGD:11554173
G Tubgcp4 tubulin, gamma complex associated protein 4 JBrowse link 3 113,131,292 113,160,750 RGD:11554173
G Tubgcp6 tubulin, gamma complex associated protein 6 JBrowse link 7 130,080,895 130,102,247 RGD:8554872
RGD:7240710
microcephaly and chorioretinopathy 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plk4 polo-like kinase 4 JBrowse link 2 127,686,911 127,705,518 RGD:7240710
RGD:8554872
microcephaly and chorioretinopathy 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tp53bp1 tumor protein p53 binding protein 1 JBrowse link 3 113,160,030 113,259,701 RGD:8554872
G Tubgcp4 tubulin, gamma complex associated protein 4 JBrowse link 3 113,131,292 113,160,750 RGD:8554872
RGD:7240710
Multifocal Choroiditis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cfb complement factor B JBrowse link 20 4,536,206 4,542,073 RGD:7411728
G Cfh complement factor H JBrowse link 13 56,979,155 57,080,540 RGD:7411728
partial central choroid dystrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:13592920
Polypoidal Choroidal Vasculopathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C2 complement C2 JBrowse link 20 4,542,340 4,561,152 RGD:7411694
G Cfb complement factor B JBrowse link 20 4,536,206 4,542,073 RGD:7411694
G Cfh complement factor H JBrowse link 13 56,979,155 57,080,540 RGD:7411726
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:9491775
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:9585729
RGD:9585730
G Htra1 HtrA serine peptidase 1 JBrowse link 1 201,499,067 201,548,508 RGD:7394749
RGD:7394751
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:8547885
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:8547885
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:7483605
Toxoplasma Chorioretinitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7365046
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:7829805

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15503
    sensory system disease 4666
      eye disease 2226
        uveal disease 217
          choroid disease 55
            Choroid Hemorrhage 0
            Choroid Neoplasms + 0
            Choroidal Effusions + 0
            Choroidal Neovascularization + 42
            Choroideremia + 1
            Microcephaly and Chorioretinopathy + 4
            Noble Bass Sherman Syndrome 0
            Presumed Ocular Histoplasmosis Syndrome 0
            autosomal dominant vitreoretinochoroidopathy 2
            choroidal sclerosis + 2
            choroiditis + 8
            gyrate atrophy + 1
Path 2
Term Annotations click to browse term
  disease 15503
    disease of anatomical entity 14857
      nervous system disease 10273
        sensory system disease 4666
          eye disease 2226
            uveal disease 217
              choroid disease 55
                Choroid Hemorrhage 0
                Choroid Neoplasms + 0
                Choroidal Effusions + 0
                Choroidal Neovascularization + 42
                Choroideremia + 1
                Microcephaly and Chorioretinopathy + 4
                Noble Bass Sherman Syndrome 0
                Presumed Ocular Histoplasmosis Syndrome 0
                autosomal dominant vitreoretinochoroidopathy 2
                choroidal sclerosis + 2
                choroiditis + 8
                gyrate atrophy + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.