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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:gyrate atrophy
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Accession:DOID:1415 term browser browse the term
Definition:Progressive, autosomal recessive, diffuse atrophy of the choroid, pigment epithelium, and sensory retina that begins in childhood.
Synonyms:exact_synonym: GACR;   Gyrate Atrophy of Choroid and Retina;   Gyrate Atrophy of Choroid and Retina with Pyridoxine-Responsive Ornithinemia;   Gyrate Atrophy of the Choroid and Retina;   Gyrate atrophy of the choroid and/or retina;   HOGA;   Hyperornithinemia with Gyrate Atrophy of Choroid and Retina;   OAT Deficiency;   OKT Deficiency;   Ornithine Aminotransferase Deficiency;   Ornithine Delta Aminotransferase Deficiency;   Ornithine Keto Acid Aminotransferase Deficiency;   Ornithine Ketoacid Aminotransferase Deficiency;   Ornithinemia with Gyrate Atrophy;   gyrate atrophy of the retina
 primary_id: MESH:D015799;   RDO:0001120
 alt_id: MIM:258870
 xref: GARD:6556;   NCI:C84744
For additional species annotation, visit the Alliance of Genome Resources.


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gyrate atrophy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx1-2 NK1 homeobox 2 ISO ClinVar Annotator: match by term: Ornithine aminotransferase deficiency ClinVar PMID:1737786 PMID:23076989 PMID:28492532 NCBI chrNW_004955477:2,468,902...2,472,078
Ensembl chrNW_004955477:2,466,648...2,472,343
JBrowse link
G Oat ornithine aminotransferase ISO ClinVar Annotator: match by term: Ornithine aminotransferase deficiency OMIM
ClinVar
PMID:1301936 PMID:1427882 PMID:1487247 PMID:1609808 PMID:1612597 More... NCBI chrNW_004955477:2,430,146...2,450,135
Ensembl chrNW_004955477:2,429,776...2,450,624
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 ISO ClinVar Annotator: match by term: Ornithine aminotransferase deficiency ClinVar PMID:16199547 PMID:25741868 PMID:28492532 PMID:32531858 NCBI chrNW_004955488:6,999,128...7,196,583
Ensembl chrNW_004955488:6,936,952...7,197,022
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14337
    sensory system disease 6559
      eye disease 3390
        Hereditary Eye Diseases 1064
          gyrate atrophy 3
            Moloney Syndrome 0
Path 2
Term Annotations click to browse term
  disease 14337
    disease of anatomical entity 14030
      nervous system disease 12349
        Neurologic Manifestations 9211
          sensory system disease 6559
            eye disease 3390
              uveal disease 198
                choroid disease 58
                  gyrate atrophy 3
                    Moloney Syndrome 0
paths to the root