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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:coccidioidomycosis
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Accession:DOID:13450 term browser browse the term
Definition:A primary systemic mycosis that results_in systemic fungal infection, has_material_basis_in Coccidioides immitis, transmitted_by airborne spores and has_symptom conjunctivitis, has_symptom arthritis, has_symptom chest pain and results_in_formation_of skin nodules. (DO)
Synonyms:exact_synonym: Coccidioides immitis Infection;   Coccidioides immitis infections;   Coccidioidomycoses;   San Joaquin Valley Fever;   Valley Fever;   primary extrapulmonary coccidioidomycosis;   valley fevers
 primary_id: MESH:D003047
 xref: EFO:0007211;   GARD:9525;   ICD10CM:B38;   ICD9CM:114;   NCI:C84642
For additional species annotation, visit the Alliance of Genome Resources.


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coccidioidomycosis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBL2 mannose binding lectin 2 ISO protein:decreased secretion:serum (human) RGD PMID:19083122 RGD:4889458 NCBI chr14:97,103,926...97,107,635
Ensembl chr14:97,102,823...97,108,083 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17412
    disease by infectious agent 2089
      Bacterial Infections and Mycoses 997
        fungal infectious disease 154
          systemic mycosis 133
            primary systemic mycosis 19
              coccidioidomycosis 1
paths to the root