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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:paracoccidioidomycosis
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Accession:DOID:12662 term browser browse the term
Definition:A primary systemic mycosis that results_in systemic fungal infection located_in mucosa, located_in lymph nodes, located_in bone, located_in skin or located_in lungs, has_material_basis_in Paracoccidioides brasiliensis. (DO)
Synonyms:exact_synonym: South American blastomycosis;   mucocutaneous-lymphangitic paracoccidioidomycosis;   paracoccidioidal mycosis;   paracoccidioidomycoses
 primary_id: MESH:D010229
 xref: EFO:0007417;   GARD:7323;   ICD10CM:B41;   ICD9CM:116.1;   NCI:C34891
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
paracoccidioidomycosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR5 C-C motif chemokine receptor 5 ISO RGD PMID:18292527 RGD:4892087 NCBI chr 3:46,370,142...46,376,206
Ensembl chr 3:46,370,946...46,376,206 		JBrowse link
G CD28 CD28 molecule ISO RGD PMID:20713624 RGD:5131616 NCBI chr 2:203,706,482...203,738,912
Ensembl chr 2:203,706,475...203,738,912 		JBrowse link
G CFB complement factor B IEP RGD PMID:7921333 RGD:7421526 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086 		JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 severity IAGP DNA:polymorphism, haplotype:cds:HLA-DRB1*11 (human) RGD PMID:17325942 RGD:5147631 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848 		JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:17003484 RGD:8547589 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 ISO mRNA, protein:decreased expression, decreased activity:lung,plasmacytoid dendritic cell (mouse) RGD PMID:27992577 RGD:39939072 NCBI chr 8:39,913,891...39,928,790
Ensembl chr 8:39,902,275...39,928,790 		JBrowse link
G IL18 interleukin 18 treatment IEP RGD PMID:28992214 RGD:39938858 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,253...112,164,096 		JBrowse link
G IL1B interleukin 1 beta treatment IEP RGD PMID:28992214 RGD:39938858 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816 		JBrowse link
G IL1RL1 interleukin 1 receptor like 1 treatment IEP RGD PMID:28992214 RGD:39938858 NCBI chr 2:102,311,563...102,352,356
Ensembl chr 2:102,311,502...102,352,037 		JBrowse link
G IL32 interleukin 32 IEP protein:increased expression:mouth mucosa, mononuclear cell (human) RGD PMID:33771629 RGD:150340738 NCBI chr16:3,065,403...3,069,530
Ensembl chr16:3,065,297...3,082,192 		JBrowse link
G IL33 interleukin 33 treatment IEP RGD PMID:28992214 RGD:39938858 NCBI chr 9:6,215,149...6,257,983
Ensembl chr 9:6,215,786...6,257,983 		JBrowse link
G IL37 interleukin 37 treatment IEP RGD PMID:28992214 RGD:39938858 NCBI chr 2:112,911,165...112,918,882
Ensembl chr 2:112,911,165...112,918,882 		JBrowse link
G MMP2 matrix metallopeptidase 2 ISO RGD PMID:19765107 RGD:8657058 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691 		JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:19765107 RGD:8657058 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561 		JBrowse link
G TNF tumor necrosis factor susceptibility IAGP DNA:SNP:promoter:−308G>A(human) RGD PMID:17145373 RGD:7401182 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 41189
    disease of anatomical entity 32344
      integumentary system disease 4874
        cutaneous mycosis 122
          paracoccidioidomycosis 15
            Colangite Esclerosante Porracoccidiodomicose 0
Path 2
Term Annotations click to browse term
  disease 41189
    disease of anatomical entity 32344
      nervous system disease 26233
        Neurologic Manifestations 15387
          sensory system disease 9730
            skin disease 4874
              Infectious Skin Diseases 291
                cellulitis 16
                  paracoccidioidomycosis 15
                    Colangite Esclerosante Porracoccidiodomicose 0
paths to the root