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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:vulva cancer
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Accession:DOID:1245 term browser browse the term
Definition:A female reproductive organ cancer that is located_in the vulva. (DO)
Synonyms:exact_synonym: Ca vulva;   cancer of the vulva;   cancer of vulva;   malignant neoplasm of vulva;   malignant tumor of vulva;   malignant vulvar tumor;   vulva cancers;   vulval cancer;   vulvar cancer;   vulvar cancers
 xref: GARD:9349;   ICD10CM:C51;   ICD9CM:184.4;   NCI:C7502
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
vulva cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 severity ISO associated with Papillomavirus Infections RGD PMID:22685591 RGD:38676500 NCBI chr12:112,653,821...112,674,884
Ensembl chr12:112,653,821...112,674,884
JBrowse link
G H2-Ab1 histocompatibility 2, class II antigen A, beta 1 susceptibility ISO associated with Papillomavirus Infections;DNA:polymorphisms: :HLA-DQB1*03032,DQB1*5(human) RGD PMID:12543794 RGD:2314696 NCBI chr17:34,263,227...34,269,418
Ensembl chr17:34,257,689...34,269,419
JBrowse link
G H2-Eb1 histocompatibility 2, class II antigen E beta susceptibility ISO associated with Papillomavirus Infections;DNA:polymorphisms: :HLA-DRB1*11,DRB1*01,DRB1*13(human) RGD PMID:12543794 RGD:2314696 NCBI chr17:34,305,867...34,316,674
Ensembl chr17:34,305,867...34,316,674
JBrowse link
G H2-Q1 histocompatibility 2, Q region locus 1 susceptibility ISO associated with Papillomavirus Infections;DNA:polymorphism: :HLA-A2 RGD PMID:12543794 RGD:2314696 NCBI chr17:35,320,525...35,328,142
Ensembl chr17:35,320,405...35,325,099
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:10027405 RGD:2293612 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell disease_progression ISO DNA:repeat:intron RGD PMID:15196865 RGD:2292078 NCBI chr 5:24,364,816...24,384,474
Ensembl chr 5:24,364,810...24,384,474
JBrowse link
vulva squamous cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc25a cell division cycle 25A ISO protein:increased expression:vulva RGD PMID:20500813 RGD:2729590 NCBI chr 9:109,875,518...109,893,895
Ensembl chr 9:109,875,579...109,893,895
JBrowse link
G Cdc25b cell division cycle 25B disease_progression ISO protein:increased expression:vulva RGD PMID:20500813 RGD:2729590 NCBI chr 2:131,186,436...131,198,511
Ensembl chr 2:131,186,949...131,198,497
JBrowse link
G Cdc25c cell division cycle 25C disease_progression ISO protein:increased expression:vulva RGD PMID:20500813 RGD:2729590 NCBI chr18:34,732,993...34,751,564
Ensembl chr18:34,732,993...34,751,533
JBrowse link
G Sfn stratifin ISO DNA, mRNA:hypermethylation, decreased expression:vulva RGD PMID:11896620 RGD:2299936 NCBI chr 4:133,600,556...133,602,168
Ensembl chr 4:133,600,556...133,602,168
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14517
    disease of anatomical entity 14115
      reproductive system disease 2720
        reproductive organ cancer 1135
          female reproductive organ cancer 516
            vulva cancer 10
              Bartholin's gland cancer + 0
              clitoris cancer 0
              labia minora cancer + 0
              labium majus cancer + 0
              vulva carcinoma + 4
              vulvar glandular tumor + 0
              vulvar melanoma 0
              vulvar sarcoma + 0
              vulvar squamous tumor + 0
Path 2
Term Annotations click to browse term
  disease 14517
    disease of anatomical entity 14115
      Urogenital Diseases 4031
        Female Urogenital Diseases and Pregnancy Complications 2025
          Female Urogenital Diseases 1725
            female reproductive system disease 1721
              Female Genital Neoplasms 705
                Vulvar Neoplasms 17
                  vulva cancer 10
                    Bartholin's gland cancer + 0
                    clitoris cancer 0
                    labia minora cancer + 0
                    labium majus cancer + 0
                    vulva carcinoma + 4
                    vulvar glandular tumor + 0
                    vulvar melanoma 0
                    vulvar sarcoma + 0
                    vulvar squamous tumor + 0
paths to the root