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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:shigellosis
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Accession:DOID:12385 term browser browse the term
Definition:A primary bacterial infectious disease that results_in infection located_in epithelium of colon, has_material_basis_in Shigella boydii, has_material_basis_in Shigella dysenteriae, has_material_basis_in Shigella flexneri, or has_material_basis_in Shigella sonnei, which produce toxins that can attack the lining of the large intestine, causing swelling, ulcers on the intestinal wall, and bloody diarrhea. The bacteria are transmitted_by ingestion of food and water contaminated with feces. (DO)
Synonyms:exact_synonym: Bacillary Dysentery;   Dysentery, Shigella dysenteriae type 1;   Shiga bacillus Dysentery;   Shigella Dysenteries;   Shigella Dysentery;   Shigella boydii Dysentery;   Shigella boydii dysenteries;   Shigella boydii infectious disease;   Shigella dysenteriae Dysenteries;   Shigella dysenteriae Dysentery;   Shigella flexneri Dysenteries;   Shigella flexneri Dysentery;   Shigella flexneri infectious disease;   Shigella gastroenteritis;   Shigella sonnei Dysenteries;   Shigella sonnei dysentery;   Shigella sonnei infectious disease
 primary_id: MESH:D004405
 xref: EFO:0005585;   GARD:4818;   ICD10CM:A03;   ICD10CM:A03.0;   ICD10CM:A03.1;   ICD10CM:A03.2;   ICD9CM:004;   ICD9CM:004.0;   ICD9CM:004.1;   ICD9CM:004.2;   NCI:C157978
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
shigellosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr 2:220,893,660...220,976,331
Ensembl chr 2:220,893,660...220,976,297 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:74,133,259...74,145,328 		JBrowse link
G Il10 interleukin 10 treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:45,025,087...45,029,580 		JBrowse link
G Il12b interleukin 12B treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr10:29,390,300...29,405,194
Ensembl chr10:29,389,905...29,405,194 		JBrowse link
G Il1b interleukin 1 beta treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19167
    disease of anatomical entity 18473
      gastrointestinal system disease 7168
        intestinal disease 3134
          colonic disease 2347
            shigellosis 5
Path 2
Term Annotations click to browse term
  disease 19167
    disease of anatomical entity 18473
      Immune & Inflammatory Diseases 5781
        Inflammation 2852
          gastroenteritis 571
            dysentery 6
              shigellosis 5
paths to the root