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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:shigellosis
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Accession:DOID:12385 term browser browse the term
Definition:DYSENTERY caused by gram-negative rod-shaped enteric bacteria (ENTEROBACTERIACEAE), most often by the genus SHIGELLA. Shigella dysentery, Shigellosis, is classified into subgroups according to syndrome severity and the infectious species. Group A: SHIGELLA DYSENTERIAE (severest); Group B: SHIGELLA FLEXNERI; Group C: SHIGELLA BOYDII; and Group D: SHIGELLA SONNEI (mildest).
Synonyms:exact_synonym: Bacillary Dysentery;   Dysentery, Shigella dysenteriae type 1;   Shiga bacillus Dysentery;   Shigella Dysenteries;   Shigella Dysentery;   Shigella boydii Dysenteries;   Shigella boydii Dysentery;   Shigella boydii infectious disease;   Shigella dysenteriae Dysenteries;   Shigella dysenteriae Dysentery;   Shigella flexneri Dysenteries;   Shigella flexneri Dysentery;   Shigella flexneri infectious disease;   Shigella gastroenteritis;   Shigella sonnei Dysenteries;   Shigella sonnei Dysentery;   Shigella sonnei infectious disease
 primary_id: MESH:D004405;   RDO:0005403
 xref: GARD:4818;   ICD10CM:A03;   ICD10CM:A03.0;   ICD10CM:A03.1;   ICD10CM:A03.2;   ICD9CM:004;   ICD9CM:004.0;   ICD9CM:004.1;   ICD9CM:004.2;   NCI:C157978
For additional species annotation, visit the Alliance of Genome Resources.



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shigellosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr 2:218,219,408...218,302,370
Ensembl chr 2:218,219,415...218,302,064
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr16:67,430,684...67,442,459
Ensembl chr16:67,430,578...67,442,730
JBrowse link
G Il10 interleukin 10 treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il12b interleukin 12B treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
JBrowse link
G Il1b interleukin 1 beta treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18030
    disease of anatomical entity 17410
      gastrointestinal system disease 6494
        gastroenteritis 552
          dysentery 6
            shigellosis 5
Path 2
Term Annotations click to browse term
  disease 18030
    disease of anatomical entity 17410
      gastrointestinal system disease 6494
        Gastrointestinal Diseases 4623
          intestinal disease 2871
            intestinal infectious disease 6
              dysentery 6
                shigellosis 5
paths to the root