Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:malaria
go back to main search page
Accession:DOID:12365 term browser browse the term
Definition:A parasitic protozoa infectious disease characterized as a vector-borne infectious disease caused by the presence of protozoan parasites of the genus Plasmodium in the red blood cells, transmitted from an infected to an uninfected individual by the bite of anopheline mosquitoes, and characterized by periodic attacks of chills and fever that coincide with mass destruction of blood cells and the release of toxic substances by the parasite at the end of each reproductive cycle. (DO)
Synonyms:exact_synonym: MALS;   Plasmodium Infection;   Plasmodium Infections;   induced malaria;   marsh fever;   paludism;   remittent fever
 related_synonym: DUFFY BLOOD GROUP SYSTEM, FY(a-b-) PHENOTYPE;   Glycophorin C, Gerbich Variant;   MALARIA, CEREBRAL, RESISTANCE TO;   MALARIA, CEREBRAL, SUSCEPTIBILITY TO;   MALARIA, MILD, SUSCEPTIBILITY TO;   MALARIA, RESISTANCE TO;   MALARIA, SEVERE, RESISTANCE TO;   MALARIA, SEVERE, SUSCEPTIBILITY TO;   plasmodium vivax, resistance to;   susceptibility to malaria
 primary_id: MESH:D008288
 alt_id: OMIM:609148;   OMIM:611162
 xref: EFO:0001068;   EFO:0009157;   GARD:6961;   ICD10CM:B54;   ICD9CM:084;   NCI:C34797;   ORDO:673
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP-binding cassette, sub-family B member 1A treatment
susceptibility
ISO DNA:SNP: :c3435C>T(human)
DNA:hypermethylation:promoter
DNA:SNPs,haplotype: :rs2032582, rs1128503 (human)
DNA:haplotype: :1236C>T, 2677G>T,3435C>T (human)
RGD PMID:28934955 PMID:19331170 PMID:28422980 PMID:17015054 RGD:39456120, RGD:39457680, RGD:39457679, RGD:39456123 NCBI chr 5:8,617,091...8,798,575
Ensembl chr 5:8,710,077...8,798,575
JBrowse link
G Ace angiotensin I converting enzyme severity IMP RGD PMID:31234939 RGD:39939120 NCBI chr11:105,858,774...105,880,790
Ensembl chr11:105,858,771...105,880,790
JBrowse link
G Ackr1 atypical chemokine receptor 1 (Duffy blood group) ISO ClinVar Annotator: match by term: Plasmodium vivax, resistance to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:7663520 PMID:8547665 PMID:8651934 PMID:10570183 PMID:10791881 More... NCBI chr 1:173,159,457...173,161,079
Ensembl chr 1:173,159,453...173,161,317
JBrowse link
G Aicda activation-induced cytidine deaminase IEP protein:increased expression: B cell RGD PMID:27980783 RGD:30310233 NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139
JBrowse link
G Ank1 ankyrin 1, erythroid IAGP OMIM:609148 | OMIM:611162 MouseDO NCBI chr 8:23,464,852...23,640,517
Ensembl chr 8:23,464,860...23,640,513
JBrowse link
G Apoe apolipoprotein E ISO DNA:missense mutations:cds:p.C112R, p.C158R (human) RGD PMID:24116184 RGD:11039486 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Aqp4 aquaporin 4 IAGP OMIM:609148 | OMIM:611162 MouseDO NCBI chr18:15,522,451...15,544,039
Ensembl chr18:15,522,553...15,544,039
JBrowse link
G Cbs cystathionine beta-synthase susceptibility ISO DNA:insertion:cds: (844ins68) (human) RGD PMID:27198213 RGD:40903062 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Cd163 CD163 antigen exacerbates
severity
ISO protein:increased expression:blood plasma (human)
protein:altered expression:blood plasma (human)
RGD PMID:22290142 PMID:18632918 RGD:127285797, RGD:149735529 NCBI chr 6:124,281,596...124,307,488
Ensembl chr 6:124,281,615...124,307,486
JBrowse link
G Cd1d1 CD1d1 antigen ameliorates
exacerbates
IMP RGD PMID:12938235 PMID:24703850 RGD:127345117, RGD:127345121 NCBI chr 3:86,903,141...86,919,665
Ensembl chr 3:86,903,141...86,906,748
JBrowse link
G Cd36 CD36 molecule susceptibility ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Malaria, cerebral, susceptibility to | ClinVar Annotator: match by term: Malaria, susceptibility to
CTD
OMIM
ClinVar
PMID:10890433 PMID:18305138 PMID:19403559 PMID:25741868 PMID:28960434 More... NCBI chr 5:17,986,680...18,093,828
Ensembl chr 5:17,986,688...18,093,799
JBrowse link
G Cd40 CD40 antigen severity IMP RGD PMID:11485931 RGD:11352239 NCBI chr 2:164,897,535...164,913,574
Ensembl chr 2:164,897,547...164,914,868
JBrowse link
G Cd40lg CD40 ligand severity IMP RGD PMID:11485931 RGD:11352239 NCBI chr  X:56,257,448...56,269,402
Ensembl chr  X:56,257,503...56,269,402
JBrowse link
G Cish cytokine inducible SH2-containing protein susceptibility ISO ClinVar Annotator: match by term: Malaria, susceptibility to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:20484391 NCBI chr 9:107,173,858...107,179,983
Ensembl chr 9:107,173,225...107,179,983
JBrowse link
G Crp C-reactive protein, pentraxin-related ISO CTD Direct Evidence: marker/mechanism CTD PMID:8730300 NCBI chr 1:172,525,623...172,527,533
Ensembl chr 1:172,525,622...172,660,598
JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 treatment
disease_progression
IMP
ISO
RGD PMID:28892065 PMID:28892065 RGD:38455986, RGD:38455986 NCBI chr 1:60,948,184...60,954,991
Ensembl chr 1:60,926,159...60,954,991
JBrowse link
G Ephb2 Eph receptor B2 IEP mRNA:increased expression:liver RGD PMID:25784101 RGD:127285023 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299
JBrowse link
G Ephb3 Eph receptor B3 ISO RGD PMID:25784101 RGD:127285023 NCBI chr16:21,023,530...21,042,054
Ensembl chr16:21,023,505...21,042,055
JBrowse link
G Ephb6 Eph receptor B6 IEP RGD PMID:25784101 RGD:127285023 NCBI chr 6:41,581,940...41,597,445
Ensembl chr 6:41,582,416...41,597,443
JBrowse link
G Fcgr2b Fc receptor, IgG, low affinity IIb susceptibility IAGP
ISO
OMIM:609148 | OMIM:611162
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Malaria, resistance to
MouseDO
OMIM
CTD
ClinVar
PMID:12115230 PMID:15459183 PMID:16115811 PMID:16170323 PMID:17435165 More... NCBI chr 1:170,786,186...170,804,141
Ensembl chr 1:170,786,186...170,804,116
JBrowse link
G Fcgr3 Fc receptor, IgG, low affinity III ISO DNA:missense mutation:cds:p.H131R (human) RGD PMID:19965803 RGD:5147921 NCBI chr 1:170,878,738...170,893,477
Ensembl chr 1:170,878,743...170,892,504
JBrowse link
G Foxp3 forkhead box P3 disease_progression ISO RGD PMID:19338000 PMID:16169501 RGD:38455985, RGD:38455992 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484
JBrowse link
G G6pdx glucose-6-phosphate dehydrogenase X-linked susceptibility
severity
ISO DNA:SNPs: :multiple
ClinVar Annotator: match by term: Malaria, susceptibility to
CTD Direct Evidence: marker/mechanism
DNA:point mutation:cds:c.968T>C (human)
ClinVar
CTD
OMIM
RGD
PMID:5448 PMID:16832 PMID:511159 PMID:736032 PMID:853376 More... RGD:10449111, RGD:10449115 NCBI chr  X:73,453,089...73,472,486
Ensembl chr  X:73,453,089...73,472,800
JBrowse link
G Gypa glycophorin A ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
NCBI chr 8:81,220,674...81,237,414
Ensembl chr 8:81,220,410...81,237,171
JBrowse link
G Gypc glycophorin C ISO ClinVar Annotator: match by term: Malaria, resistance to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:1991173 PMID:5011657 PMID:8157284 PMID:11719395 PMID:12469115 More... NCBI chr18:32,661,373...32,693,087
Ensembl chr18:32,661,375...32,693,087
JBrowse link
G Hbb-b1 hemoglobin, beta adult major chain resistance ISO Hemoglobin C; DNA:polymorphism:CDS:69G>A, amino acid E6K
ClinVar Annotator: match by term: Malaria, resistance to | ClinVar Annotator: match by term: Malaria, susceptibility to
CTD Direct Evidence: marker/mechanism
RGD
ClinVar
CTD
OMIM
PMID:14973 PMID:49057 PMID:81926 PMID:88735 PMID:700140 More... RGD:1600894
G Hbb-b2 hemoglobin, beta adult minor chain resistance ISO RGD PMID:11001883 RGD:1600894
G Hmox1 heme oxygenase 1 IAGP OMIM:609148 | OMIM:611162 MouseDO NCBI chr 8:75,820,246...75,827,221
Ensembl chr 8:75,820,249...75,827,217
JBrowse link
G Hp haptoglobin ISO CTD Direct Evidence: marker/mechanism CTD PMID:8730300 PMID:16597321 NCBI chr 8:110,301,760...110,305,804
Ensembl chr 8:110,301,760...110,305,804
JBrowse link
G Icam1 intercellular adhesion molecule 1 susceptibility IAGP
ISO
OMIM:609148 | OMIM:611162
ClinVar Annotator: match by term: Malaria, cerebral, susceptibility to | ClinVar Annotator: match by term: Malaria, susceptibility to
CTD Direct Evidence: marker/mechanism
MouseDO
ClinVar
CTD
OMIM
PMID:9259284 PMID:9861406 PMID:10417733 PMID:10699175 PMID:23609612 More... NCBI chr 9:20,927,236...20,940,110
Ensembl chr 9:20,927,281...20,940,113
JBrowse link
G Ifng interferon gamma IAGP OMIM:609148 | OMIM:611162 MouseDO NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797
JBrowse link
G Ikbkg inhibitor of kappaB kinase gamma ISO ClinVar Annotator: match by term: Malaria, susceptibility to ClinVar PMID:1945893 PMID:3198117 PMID:6805883 PMID:7803800 PMID:8244337 More... NCBI chr  X:73,436,883...73,498,013
Ensembl chr  X:73,436,896...73,497,460
JBrowse link
G Il1rl1 interleukin 1 receptor-like 1 IMP RGD PMID:28359899 RGD:39938859 NCBI chr 1:40,444,105...40,504,575
Ensembl chr 1:40,468,730...40,504,575
JBrowse link
G Il21 interleukin 21 exacerbates IMP RGD PMID:25763578 RGD:127285358 NCBI chr 3:37,276,908...37,286,785
Ensembl chr 3:37,276,908...37,286,785
JBrowse link
G Il27 interleukin 27 ameliorates IMP RGD PMID:24522137 PMID:26968425 RGD:126790512, RGD:11530371 NCBI chr 7:126,188,181...126,194,197
Ensembl chr 7:126,188,182...126,194,113
JBrowse link
G Il33 interleukin 33 IEP protein:increased expression:serum: RGD PMID:28359899 RGD:39938859 NCBI chr19:29,902,513...29,938,118
Ensembl chr19:29,902,514...29,938,118
JBrowse link
G Kir3dl1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1 severity ISO DNA:deletion:cds RGD PMID:21889618 RGD:38676475 NCBI chr  X:135,418,748...135,435,055
Ensembl chr  X:135,418,748...135,435,058
JBrowse link
G LOC111365144 Nos2 promoter region ISO ClinVar Annotator: match by term: Malaria, resistance to ClinVar PMID:12433515 NCBI chr11:78,810,061...78,811,815 JBrowse link
G Ltbr lymphotoxin B receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:15788153 NCBI chr 6:125,283,534...125,291,026
Ensembl chr 6:125,283,534...125,290,848
JBrowse link
G Mapkapk3 mitogen-activated protein kinase-activated protein kinase 3 ISO ClinVar Annotator: match by term: Malaria, susceptibility to ClinVar PMID:20484391 NCBI chr 9:107,132,125...107,167,082
Ensembl chr 9:107,132,126...107,167,076
JBrowse link
G Mir122 microRNA 122 treatment IEP RGD PMID:28123381 RGD:35673288 NCBI chr18:65,381,932...65,381,997
Ensembl chr18:65,381,932...65,381,997
JBrowse link
G Mir142 microRNA 142 treatment IEP RGD PMID:28123381 RGD:35673288 NCBI chr11:87,647,690...87,647,753
Ensembl chr11:87,647,690...87,647,753
JBrowse link
G Mir669n microRNA 669n treatment IEP RGD PMID:28123381 RGD:35673288 NCBI chr 3:115,773,551...115,773,604
Ensembl chr 3:115,773,551...115,773,604
JBrowse link
G Mir709 microRNA 709 treatment IEP RGD PMID:28123381 RGD:35673288 NCBI chr 8:84,812,728...84,812,815
Ensembl chr 8:84,812,728...84,812,815
JBrowse link
G Mirlet7a-1 microRNA let7a-1 treatment IEP RGD PMID:28123381 RGD:35673288 NCBI chr13:48,691,655...48,691,748
Ensembl chr13:48,691,655...48,691,748
JBrowse link
G Mirlet7c-1 microRNA let7c-1 treatment IEP RGD PMID:28123381 RGD:35673288 NCBI chr16:77,396,545...77,396,638
Ensembl chr16:77,396,545...77,396,638
JBrowse link
G Mki67 antigen identified by monoclonal antibody Ki 67 IDA associated with Lung Neoplasms RGD PMID:21931708 RGD:6483517 NCBI chr 7:135,291,513...135,318,286
Ensembl chr 7:135,291,513...135,318,090
JBrowse link
G Ncr3-ps natural cytotoxicity triggering receptor 3, pseudogene susceptibility ISO ClinVar Annotator: match by term: Malaria, severe, susceptibility to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:17208487 NCBI chr17:35,399,512...35,403,785
Ensembl chr17:35,399,511...35,403,638
JBrowse link
G Nos2 nitric oxide synthase 2, inducible ISO ClinVar Annotator: match by term: Malaria, resistance to | ClinVar Annotator: match by term: Malaria, severe, resistance to | ClinVar Annotator: match by term: Malaria, susceptibility to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:9457101 PMID:12433515 PMID:31995689 NCBI chr11:78,811,613...78,851,052
Ensembl chr11:78,811,613...78,851,080
JBrowse link
G Pklr pyruvate kinase liver and red blood cell susceptibility ISO
IAGP
DNA:mutations, haplotype:multiple (human)
OMIM:609148 | OMIM:611162
DNA:missense mutation:cds:p.I90N (mouse)
MouseDO
RGD
PMID:20377593 PMID:14595440 RGD:11535999, RGD:11537407 NCBI chr 3:89,043,429...89,054,122
Ensembl chr 3:89,043,449...89,054,091
JBrowse link
G Prf1 perforin 1 (pore forming protein) IMP RGD PMID:21525386 RGD:6482803 NCBI chr10:61,133,530...61,140,463
Ensembl chr10:61,133,612...61,140,459
JBrowse link
G Procr protein C receptor, endothelial disease_progression ISO RGD PMID:27671831 RGD:126848795 NCBI chr 2:155,592,159...155,597,391
Ensembl chr 2:155,593,037...155,597,391
JBrowse link
G Slc19a1 solute carrier family 19 (folate transporter), member 1 ISO DNA:SNP::g.80G>A (human) RGD PMID:27198213 RGD:40903062 NCBI chr10:76,868,103...76,886,266
Ensembl chr10:76,868,075...76,896,836
JBrowse link
G Slc4a1 solute carrier family 4 (anion exchanger), member 1 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Malaria, cerebral, resistance to | ClinVar Annotator: match by term: Malaria, susceptibility to
CTD
ClinVar
PMID:1378323 PMID:1722314 PMID:1737855 PMID:2146504 PMID:6338046 More... NCBI chr11:102,239,646...102,256,107
Ensembl chr11:102,239,650...102,257,029
JBrowse link
G Spp1 secreted phosphoprotein 1 IDA RGD PMID:16552072 RGD:1581333 NCBI chr 5:104,582,977...104,588,919
Ensembl chr 5:104,582,984...104,588,916
JBrowse link
G Tbx21 T-box 21 ISO RGD PMID:19338000 RGD:38455985 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157
JBrowse link
G Tirap toll-interleukin 1 receptor (TIR) domain-containing adaptor protein ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Malaria, resistance to
CTD
OMIM
ClinVar
PMID:16991088 PMID:17322885 PMID:18305471 PMID:25741868 NCBI chr 9:35,095,687...35,111,587
Ensembl chr 9:35,095,847...35,111,587
JBrowse link
G Tnf tumor necrosis factor susceptibility ISO DNA:polymorphism:promoter:-376G>A
ClinVar Annotator: match by term: Malaria, cerebral, susceptibility to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
RGD
PMID:8056188 PMID:9818939 PMID:10369255 PMID:10450718 PMID:11261930 More... RGD:1624967 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 severity ISO DNA:SNP: :rs2234237A>T (human) RGD PMID:27671831 RGD:126848795 NCBI chr17:48,539,763...48,553,955
Ensembl chr17:48,539,796...48,553,952
JBrowse link
G Tslp thymic stromal lymphopoietin IEP mRNA:altered expression:multiple (mouse) RGD PMID:28955823 RGD:38596344 NCBI chr18:32,948,436...32,952,852
Ensembl chr18:32,948,436...32,952,850
JBrowse link
cerebral malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 susceptibility ISO DNA:SNP:intron 1: C>T RGD PMID:20117248 RGD:40818420 NCBI chr  X:162,922,338...162,971,414
Ensembl chr  X:162,922,328...162,971,416
JBrowse link
G Aqp4 aquaporin 4 disease_progression IEP protein:increased expression:astrocyte: RGD PMID:21904632 RGD:8698661 NCBI chr18:15,522,451...15,544,039
Ensembl chr18:15,522,553...15,544,039
JBrowse link
G Cast calpastatin IEP protein:increased express:brain RGD PMID:16236382 RGD:5509817 NCBI chr13:74,840,485...74,956,993
Ensembl chr13:74,840,487...74,956,929
JBrowse link
G Cd36 CD36 molecule IMP RGD PMID:17367535 RGD:6893527 NCBI chr 5:17,986,680...18,093,828
Ensembl chr 5:17,986,688...18,093,799
JBrowse link
G Clec12a C-type lectin domain family 12, member a ameliorates IMP RGD PMID:31269448 RGD:41412201 NCBI chr 6:129,327,207...129,342,266
Ensembl chr 6:129,319,654...129,342,266
JBrowse link
G Il1rl1 interleukin 1 receptor-like 1 treatment IMP RGD PMID:25682948 RGD:40400741 NCBI chr 1:40,444,105...40,504,575
Ensembl chr 1:40,468,730...40,504,575
JBrowse link
G Il33 interleukin 33 treatment IDA
IEP
protein:increased expression:brain RGD PMID:25659095 PMID:25682948 RGD:39938955, RGD:40400741 NCBI chr19:29,902,513...29,938,118
Ensembl chr19:29,902,514...29,938,118
JBrowse link
G Jak3 Janus kinase 3 IMP RGD PMID:22363534 RGD:11531103 NCBI chr 8:72,129,027...72,143,221
Ensembl chr 8:72,128,940...72,143,219
JBrowse link
G Lta lymphotoxin A IMP RGD PMID:12021316 RGD:10449455 NCBI chr17:35,422,141...35,424,568
Ensembl chr17:35,422,141...35,424,327
JBrowse link
G Nrg1 neuregulin 1 treatment IEP
ISO
mRNA, protein:increased expression:cerebral cortex (mouse)
human protein in a mouse model
RGD PMID:29636063 PMID:24433482 RGD:39456084, RGD:39456102 NCBI chr 8:32,299,493...33,381,858
Ensembl chr 8:32,304,579...33,374,825
Ensembl chr 8:32,304,579...33,374,825
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma IMP RGD PMID:25775137 RGD:38599200 NCBI chr12:32,223,128...32,258,675
Ensembl chr12:32,223,472...32,258,658
JBrowse link
G Prkaa2 protein kinase, AMP-activated, alpha 2 catalytic subunit IEP mRNA:decreased expression:brain (mouse) RGD PMID:29107705 RGD:39456137 NCBI chr 4:104,886,846...104,967,095
Ensembl chr 4:104,887,071...104,967,087
JBrowse link
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b IMP RGD PMID:12228317 RGD:5131158 NCBI chr 4:144,938,938...144,973,453
Ensembl chr 4:144,940,033...144,973,440
JBrowse link
Malarial Anemia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr4 Fc receptor, IgG, low affinity IV severity
susceptibility
ISO DNA:polymorphism: :p.F176V (human) RGD PMID:20231419 PMID:23045477 RGD:11040771, RGD:11344971 NCBI chr 1:170,846,495...170,857,330
Ensembl chr 1:170,846,489...170,857,330
JBrowse link
G Slc4a1 solute carrier family 4 (anion exchanger), member 1 severity ISO DNA:snp:promoter:g.-5699T>C (human) RGD PMID:16960783 RGD:10450507 NCBI chr11:102,239,646...102,256,107
Ensembl chr11:102,239,650...102,257,029
JBrowse link
G Tlr9 toll-like receptor 9 susceptibility ISO DNA:SNP:promoter:g.-1237T>C (rs5743836) (human) RGD PMID:23045477 RGD:11344971 NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082
JBrowse link
Plasmodium falciparum malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase susceptibility ISO DNA:SNPs,haplotype:multiple RGD PMID:18003641 RGD:39938831 NCBI chr 2:26,732,508...26,754,973
Ensembl chr 2:26,732,515...26,754,991
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO protein:decreased activity:plasma (human) RGD PMID:20062916 RGD:10449041 NCBI chr 2:26,863,363...26,899,638
Ensembl chr 2:26,863,428...26,899,640
JBrowse link
G Bsg basigin ISO CTD Direct Evidence: therapeutic CTD PMID:22080952 PMID:26195724 NCBI chr10:79,540,192...79,547,813
Ensembl chr10:79,540,325...79,547,803
JBrowse link
G Cast calpastatin ISO protein:alter localization:erythrocyte RGD PMID:17359359 RGD:5509812 NCBI chr13:74,840,485...74,956,993
Ensembl chr13:74,840,487...74,956,929
JBrowse link
G Ccl4 C-C motif chemokine ligand 4 ISO mRNA, protein:increased expression:blood, RGD PMID:15972509 RGD:5683898 NCBI chr11:83,553,410...83,555,509
Ensembl chr11:83,553,410...83,555,509
JBrowse link
G Clec11a C-type lectin domain family 11, member a ISO CTD Direct Evidence: marker/mechanism CTD PMID:19884328 NCBI chr 7:43,953,190...43,956,383
Ensembl chr 7:43,952,111...43,956,326
JBrowse link
G Cyp2c38 cytochrome P450, family 2, subfamily c, polypeptide 38 treatment ISO DNA:polymorphisms:: RGD PMID:10471063 RGD:124713538 NCBI chr19:39,379,109...39,451,519
Ensembl chr19:39,378,000...39,451,519
JBrowse link
G Fas Fas cell surface death receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:21625619 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fcgr3 Fc receptor, IgG, low affinity III severity ISO DNA:missense mutation:cds:p.R131H (rs1801274) (human) RGD PMID:18194515 RGD:5147927 NCBI chr 1:170,878,738...170,893,477
Ensembl chr 1:170,878,743...170,892,504
JBrowse link
G G6pdx glucose-6-phosphate dehydrogenase X-linked severity ISO DNA:missense mutation:cds:202G>A (p.V68M) (human) RGD PMID:24943486 RGD:10449113 NCBI chr  X:73,453,089...73,472,486
Ensembl chr  X:73,453,089...73,472,800
JBrowse link
G Gstp1 glutathione S-transferase, pi 1 severity ISO RGD PMID:19635899 RGD:10450848 NCBI chr19:4,085,411...4,087,912
Ensembl chr19:4,085,407...4,087,985
JBrowse link
G H2-Ab1 histocompatibility 2, class II antigen A, beta 1 susceptibility ISO DNA:polymorphism:cds:HLA-DQB1*0501 (human) RGD PMID:11076705 RGD:11041780 NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393
JBrowse link
G Hbb-b1 hemoglobin, beta adult major chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:20305663
G Hp haptoglobin severity ISO DNA:missense mutation:cds:p.K54E (human) RGD PMID:24478401 RGD:11041793 NCBI chr 8:110,301,760...110,305,804
Ensembl chr 8:110,301,760...110,305,804
JBrowse link
G Il13 interleukin 13 ISO protein:increased expression:plasma RGD PMID:21985368 RGD:5684362 NCBI chr11:53,522,150...53,525,529
Ensembl chr11:53,522,151...53,525,529
JBrowse link
G Mbl2 mannose-binding lectin (protein C) 2 susceptibility ISO DNA:haplotype:exon: RGD PMID:18396436 RGD:11530064 NCBI chr19:30,210,306...30,217,087
Ensembl chr19:30,210,342...30,217,087
JBrowse link
G Tnf tumor necrosis factor severity ISO protein:increased expression:plasma RGD PMID:1984482 RGD:10450571 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
Plasmodium vivax malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr1 atypical chemokine receptor 1 (Duffy blood group) ISO ClinVar Annotator: match by term: Resistance to Plasmodium vivax infection OMIM
ClinVar
PMID:7663520 PMID:8547665 PMID:8651934 PMID:10570183 PMID:10791881 More... NCBI chr 1:173,159,457...173,161,079
Ensembl chr 1:173,159,453...173,161,317
JBrowse link
Pregnancy-associated Malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO RGD PMID:24717969 RGD:11041890 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711
JBrowse link
G Mir146 microRNA 146 susceptibility ISO miRNA:SNP: (rs2910164) (human) RGD PMID:30642347 RGD:126925184 NCBI chr11:43,265,224...43,265,288
Ensembl chr11:43,265,224...43,265,288
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18296
    disease by infectious agent 2195
      parasitic infectious disease 318
        parasitic protozoa infectious disease 167
          malaria 84
            Acute Malaria 0
            Avian Malaria 0
            Malarial Anemia 3
            Plasmodium Falciparum Blood Infection Level 0
            Plasmodium falciparum malaria + 19
            Plasmodium malariae malaria 0
            Plasmodium ovale malaria 0
            Plasmodium vivax malaria 1
            blackwater fever 0
            cerebral malaria 13
            mixed malaria 0
Path 2
Term Annotations click to browse term
  disease 18296
    disease of anatomical entity 15613
      Immune & Inflammatory Diseases 5164
        Inflammation 2521
          Systemic Inflammatory Response Syndrome 406
            Sepsis 404
              Parasitemia 84
                malaria 84
                  Acute Malaria 0
                  Avian Malaria 0
                  Malarial Anemia 3
                  Plasmodium Falciparum Blood Infection Level 0
                  Plasmodium falciparum malaria + 19
                  Plasmodium malariae malaria 0
                  Plasmodium ovale malaria 0
                  Plasmodium vivax malaria 1
                  blackwater fever 0
                  cerebral malaria 13
                  mixed malaria 0
paths to the root