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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:sigmoid colon cancer
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Accession:DOID:12192 term browser browse the term
Synonyms:exact_synonym: Ca sigmoid colon;   malignant tumor of sigmoid colon
 xref: ICD10CM:C18.7;   ICD9CM:153.3
For additional species annotation, visit the Alliance of Genome Resources.


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sigmoid colon cancer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Malignant tumor of sigmoid colon ClinVar PMID:25741868 PMID:28492532 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Malignant tumor of sigmoid colon ClinVar PMID:10495924 PMID:12658575 PMID:20215533 PMID:24323032 PMID:25117503 More... NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msh6 mutS homolog 6 ISO ClinVar Annotator: match by term: Malignant tumor of sigmoid colon ClinVar PMID:9354786 PMID:12376507 PMID:18809606 PMID:19924528 PMID:20176959 More... NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17205
    disease of anatomical entity 16551
      gastrointestinal system disease 6061
        intestinal disease 2447
          colonic disease 1874
            Colorectal Neoplasms 1506
              Colonic Neoplasms 776
                colon cancer 620
                  sigmoid colon cancer 3
                    rectosigmoid junction cancer + 0
Path 2
Term Annotations click to browse term
  disease 17205
    disease of anatomical entity 16551
      gastrointestinal system disease 6061
        Gastrointestinal Diseases 4144
          intestinal disease 2447
            Intestinal Neoplasms 1528
              intestinal cancer 763
                large intestine cancer 760
                  colorectal cancer 760
                    colon cancer 620
                      sigmoid colon cancer 3
                        rectosigmoid junction cancer + 0
paths to the root