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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:cryptococcosis
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Accession:DOID:12053 term browser browse the term
Definition:An opportunistic mycosis that results_in fungal infection and has_material_basis_in Cryptococcus neoformans or Cryptococcus gattii. (DO)
Synonyms:exact_synonym: Busse-Buschke's disease;   European cryptococcosis;   Toruloses;   cryptococcal infection;   cryptococcoses;   torula;   torulosis
 related_synonym: cryptococcus neoformans infection
 primary_id: MESH:D003453
 xref: EFO:0007229;   GARD:6218;   ICD10CM:B45;   ICD9CM:117.5;   NCI:C2967
For additional species annotation, visit the Alliance of Genome Resources.


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show annotations for term's descendants           Sort by:
 
cryptococcosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase exacerbates ISO RGD PMID:23820392 RGD:124715476 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441
JBrowse link
G Cd40 CD40 molecule treatment ISO RGD PMID:16552046 RGD:7248435 NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
JBrowse link
G Cd86 CD86 molecule ISO protein:increased expression:lung, dendritic cell (mouse) RGD PMID:16790753 RGD:4892554 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Chia chitinase acidic ISO protein:increased expression:lung (rat) RGD PMID:18482441 RGD:4990459 NCBI chrNW_004939091:1,194...12,273
Ensembl chrNW_004939091:1,190...12,272
JBrowse link
G Il23a interleukin 23 subunit alpha severity ISO RGD PMID:16393998 PMID:22342846 RGD:39457936 RGD:39458042 NCBI chrNW_004936646:743,630...745,998
Ensembl chrNW_004936646:743,688...745,836
JBrowse link
G Il33 interleukin 33 ISO mRNA:increased expression:lung (mouse) RGD PMID:27596810 RGD:38549345 NCBI chrNW_004936539:763,755...791,461
Ensembl chrNW_004936539:623,248...791,470
JBrowse link
G Il4r interleukin 4 receptor ISO RGD PMID:18954266 RGD:4890005 NCBI chrNW_004936501:11,025,590...11,058,807
Ensembl chrNW_004936501:11,025,567...11,058,818
JBrowse link
G LOC101964975 interleukin-8 ISO mRNA:increased expression:lung (mouse) RGD PMID:27596810 RGD:38549345 NCBI chrNW_004936598:1,779,471...1,781,353
Ensembl chrNW_004936598:1,779,471...1,781,353
JBrowse link
G Marco macrophage receptor with collagenous structure disease_progression ISO RGD PMID:28298522 RGD:41412191 NCBI chrNW_004936469:51,323,746...51,366,551 JBrowse link
G Sftpc surfactant protein C ISO mRNA:increased expression:lung (mouse) RGD PMID:27596810 RGD:38549345 NCBI chrNW_004936555:5,966,610...5,982,083
Ensembl chrNW_004936555:5,979,417...5,982,011
JBrowse link
cryptococcal meningitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 molecule treatment ISO RGD PMID:29058791 RGD:41412178 NCBI chrNW_004936539:132,870...145,288
Ensembl chrNW_004936539:132,868...143,602
JBrowse link
G Pdcd1 programmed cell death 1 treatment ISO RGD PMID:29058791 RGD:41412178 NCBI chrNW_004936745:152,571...163,712
Ensembl chrNW_004936745:152,612...161,587
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 13815
    disease by infectious agent 1902
      Bacterial Infections and Mycoses 877
        fungal infectious disease 125
          cryptococcosis 12
            cryptococcal meningitis 2
Path 2
Term Annotations click to browse term
  disease 13815
    disease by infectious agent 1902
      Bacterial Infections and Mycoses 877
        fungal infectious disease 125
          systemic mycosis 118
            opportunistic mycosis 109
              cryptococcosis 12
                cryptococcal meningitis 2
paths to the root