Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:cryptococcosis
go back to main search page
Accession:DOID:12053 term browser browse the term
Definition:An opportunistic mycosis that results_in fungal infection and has_material_basis_in Cryptococcus neoformans or Cryptococcus gattii. (DO)
Synonyms:exact_synonym: Busse-Buschke's disease;   European cryptococcosis;   Toruloses;   cryptococcal infection;   cryptococcoses;   torula;   torulosis
 related_synonym: cryptococcus neoformans infection
 primary_id: MESH:D003453
 xref: EFO:0007229;   GARD:6218;   ICD10CM:B45;   ICD9CM:117.5;   NCI:C2967
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
 
cryptococcosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTK Bruton tyrosine kinase exacerbates ISO RGD PMID:23820392 RGD:124715476 NCBI chr  X:75,270,952...75,302,663
Ensembl chr  X:75,270,979...75,302,562
JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO mRNA, protein:increased expression:lung (mouse) RGD PMID:11714821 RGD:11528563 NCBI chr 9:39,008,187...39,009,932 JBrowse link
G CD40 CD40 molecule treatment ISO RGD PMID:16552046 RGD:7248435 NCBI chr24:33,352,992...33,383,488
Ensembl chr24:33,372,930...33,383,301
JBrowse link
G CD86 CD86 molecule ISO protein:increased expression:lung, dendritic cell (mouse) RGD PMID:16790753 RGD:4892554 NCBI chr33:25,256,267...25,318,855
Ensembl chr33:25,256,267...25,318,087
JBrowse link
G CHIA chitinase acidic ISO protein:increased expression:lung (rat) RGD PMID:18482441 RGD:4990459 NCBI chr 6:40,754,906...40,766,779
Ensembl chr 6:40,754,993...40,766,891
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 ISO mRNA:increased expression:lung (mouse) RGD PMID:27596810 RGD:38549345 NCBI chr13:62,435,035...62,438,354
Ensembl chr13:62,434,422...62,438,354
JBrowse link
G IL23A interleukin 23 subunit alpha severity ISO RGD PMID:16393998 PMID:22342846 RGD:39457936 RGD:39458042 NCBI chr10:635,384...640,715
Ensembl chr10:638,719...640,359
JBrowse link
G IL33 interleukin 33 ISO mRNA:increased expression:lung (mouse) RGD PMID:27596810 RGD:38549345 NCBI chr11:27,219,878...27,256,723
Ensembl chr11:27,219,878...27,256,721
JBrowse link
G IL4R interleukin 4 receptor ISO RGD PMID:18954266 RGD:4890005 NCBI chr 6:19,254,183...19,280,973
Ensembl chr 6:19,254,487...19,389,291
JBrowse link
G MARCO macrophage receptor with collagenous structure disease_progression ISO RGD PMID:28298522 RGD:41412191 NCBI chr19:30,996,209...31,034,520
Ensembl chr19:30,996,347...31,034,487
JBrowse link
G SFTPC surfactant protein C ISO mRNA:increased expression:lung (mouse) RGD PMID:27596810 RGD:38549345 NCBI chr25:35,088,295...35,090,995
Ensembl chr25:35,088,279...35,091,457
JBrowse link
cryptococcal meningitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD274 CD274 molecule treatment ISO RGD PMID:29058791 RGD:41412178 NCBI chr 1:93,461,735...93,605,772
Ensembl chr 1:93,585,518...93,603,522
JBrowse link
G MBL1 mannose binding lectin 1 susceptibility ISO associated with HIV Infections;DNA:polymorphism:cds: RGD PMID:21592999 RGD:12910861 NCBI chr 4:29,419,886...29,424,377 JBrowse link
G PDCD1 programmed cell death 1 treatment ISO RGD PMID:29058791 RGD:41412178 NCBI chr25:51,606,559...51,618,903
Ensembl chr25:51,608,173...51,618,723
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14860
    disease by infectious agent 2056
      Bacterial Infections and Mycoses 937
        fungal infectious disease 145
          cryptococcosis 14
            cryptococcal meningitis 3
Path 2
Term Annotations click to browse term
  disease 14860
    disease by infectious agent 2056
      Bacterial Infections and Mycoses 937
        fungal infectious disease 145
          systemic mycosis 137
            opportunistic mycosis 125
              cryptococcosis 14
                cryptococcal meningitis 3
paths to the root